Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 2.2e-227 792.0 410 100.0
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 2.0e-90 337.0 199 78.4
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 1.7e-86 323.9 201 73.1
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 3.0e-86 323.2 190 76.8
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 1.5e-85 320.9 189 79.4
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 9.5e-85 318.2 200 72.5
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 1.2e-84 317.8 193 74.6
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 1.1e-83 314.7 200 72.5
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 1.4e-83 314.3 200 72.0
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 8.9e-83 311.6 194 73.2
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 1.2e-82 311.2 200 72.0
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 1.2e-82 311.2 200 70.0
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 2.6e-82 310.1 202 70.3
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 5.8e-82 308.9 202 69.8
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 9.8e-82 308.1 200 70.5
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 1.3e-81 307.8 190 73.2
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 2.2e-81 307.0 190 73.2
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 6.4e-81 305.4 202 68.3
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 6.4e-81 305.4 203 69.0
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 1.9e-80 303.9 199 71.4
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 2.4e-80 303.5 191 70.7
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 3.2e-80 303.1 201 67.7
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 7.1e-80 302.0 200 72.0
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 9.2e-80 301.6 200 68.5
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 9.2e-80 301.6 201 69.7
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 1.2e-79 301.2 199 68.3
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 2.7e-79 300.1 235 62.6
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 3.5e-79 299.7 200 68.0
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 5.1e-78 295.8 199 68.3
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 1.5e-77 294.3 199 68.8
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.9e-77 293.9 207 65.2
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 2.5e-77 293.5 202 67.8
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 3.3e-77 293.1 189 68.8
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 4.3e-77 292.7 200 67.5
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 1.2e-76 291.2 200 68.0
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 1.2e-76 291.2 203 67.5
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.6e-76 290.8 199 67.3
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 2.1e-76 290.4 192 71.4
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 4.7e-76 289.3 187 69.5
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 8.1e-76 288.5 201 65.2
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 4.0e-75 286.2 188 69.1
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 4.0e-75 286.2 200 65.5
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 6.8e-75 285.4 199 64.3
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 6.8e-75 285.4 192 67.2
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 8.9e-75 285.0 200 64.0
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 1.5e-74 284.3 204 63.7
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 1.5e-74 284.3 225 60.9
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 2.6e-74 283.5 200 64.5
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 3.4e-74 283.1 199 65.3
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 3.4e-74 283.1 178 75.3
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 9.9e-74 281.6 199 64.8
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.9e-73 280.0 210 61.4
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 4.9e-73 279.3 198 63.6
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 6.4e-73 278.9 196 65.3
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 1.1e-72 278.1 203 63.1
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 1.9e-72 277.3 211 61.1
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 3.2e-72 276.6 190 66.8
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 4.1e-72 276.2 211 60.7
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 4.1e-72 276.2 218 60.1
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 1.2e-71 274.6 204 63.7
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 3.5e-71 273.1 190 64.7
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 4.6e-71 272.7 191 64.9
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 6.0e-71 272.3 191 63.9
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 1.0e-70 271.6 202 61.4
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 1.3e-70 271.2 200 62.0
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 1.7e-70 270.8 200 63.0
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 2.3e-70 270.4 202 61.9
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 2.3e-70 270.4 200 60.5
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 3.9e-70 269.6 191 66.0
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 5.1e-70 269.2 200 63.0
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 6.6e-70 268.9 190 64.2
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 6.6e-70 268.9 200 63.5
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 1.1e-69 268.1 207 60.9
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 1.5e-69 267.7 200 62.0
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.5e-69 267.7 200 64.0
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 1.9e-69 267.3 190 64.2
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 3.3e-69 266.5 200 62.0
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 4.3e-69 266.2 190 62.6
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 4.3e-69 266.2 190 62.6
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 4.3e-69 266.2 200 62.0
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 5.6e-69 265.8 202 61.9
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 7.3e-69 265.4 199 60.3
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 9.6e-69 265.0 200 62.0
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 9.6e-69 265.0 190 64.2
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 9.6e-69 265.0 190 64.2
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 9.6e-69 265.0 207 60.9
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 1.2e-68 264.6 200 62.5
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 1.2e-68 264.6 184 65.2
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 2.1e-68 263.8 200 61.0
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 2.1e-68 263.8 200 61.0
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 2.1e-68 263.8 201 61.2
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 3.6e-68 263.1 200 61.0
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 3.6e-68 263.1 200 61.0
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 4.7e-68 262.7 190 63.7
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 4.7e-68 262.7 190 63.7
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 8.1e-68 261.9 190 63.2
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 8.1e-68 261.9 200 59.5
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 1.8e-67 260.8 200 60.5
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 1.8e-67 260.8 191 62.8
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 6.8e-67 258.8 189 65.6
BolC4t22116H Brassica oleracea HOM05D004249 ORTHO05D005015 8.9e-67 258.5 216 58.8
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.2e-66 258.1 191 59.7
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 2.0e-66 257.3 200 59.5
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 4.4e-66 256.1 190 61.1
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 4.4e-66 256.1 190 58.9
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 7.6e-66 255.4 186 61.8
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 2.9e-65 253.4 200 60.0
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 3.8e-65 253.1 190 58.9
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 1.1e-64 251.5 199 58.3
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 2.4e-64 250.4 190 59.5
C04p04860 Brassica napus HOM05D004249 ORTHO05D005015 4.2e-64 249.6 251 51.4
Nitab4.5_0000013g0070 Nicotiana tabacum HOM05D004249 ORTHO05D005015 9.3e-64 248.4 170 67.1
Nitab4.5_0007944g0050 Nicotiana tabacum HOM05D004249 ORTHO05D005015 7.8e-63 245.4 170 65.9
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 1.0e-62 245.0 200 58.0
BcaB02g08889 Brassica carinata HOM05D004249 ORTHO05D005015 2.3e-62 243.8 209 58.4
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 4.3e-61 239.6 167 71.3
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 1.3e-60 238.0 204 54.4
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 1.3e-60 238.0 204 54.4
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-60 238.0 204 54.4
Gohir.A09G169300 Gossypium hirsutum HOM05D004249 ORTHO05D005015 2.4e-59 233.8 140 72.1
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 3.1e-59 233.4 191 56.0
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 3.1e-59 233.4 191 56.0
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 4.4e-58 229.6 202 56.4
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 5.8e-58 229.2 186 59.7
BcaB02g08885 Brassica carinata HOM05D004249 ORTHO05D005015 7.1e-56 222.2 205 52.7
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 9.3e-56 221.9 183 60.7
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 1.2e-55 221.5 146 70.5
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 3.5e-55 219.9 206 50.5
HPP92_011584 Vanilla planifolia HOM05D004249 ORTHO05D005015 3.0e-54 216.9 145 67.6
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 5.1e-54 216.1 176 56.8
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 2.5e-53 213.8 200 53.0
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 2.5e-53 213.8 199 50.3
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 3.1e-51 206.8 210 48.1
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 1.2e-50 204.9 203 46.8
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 4.9e-49 199.5 199 51.3
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 1.1e-48 198.4 148 64.9
COL.COLO4_19904 Corchorus olitorius HOM05D004249 ORTHO05D005015 3.3e-45 186.8 112 73.2
BolC4t22114H Brassica oleracea HOM05D004249 ORTHO05D005015 1.6e-44 184.5 123 64.2
Pp3c2_32550 Physcomitrium patens HOM05D004249 ORTHO05D005015 6.9e-43 179.1 180 46.7
vmacro00720 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 6.3e-36 156.0 91 78.0
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 3.1e-35 153.7 189 42.9
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.9e-32 144.4 115 62.6
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 3.2e-32 143.7 188 43.1
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 2.1e-31 141.0 188 42.6
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 2.1e-31 141.0 188 42.6
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 2.1e-31 141.0 219 39.3
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 2.3e-30 137.5 196 41.8
MCO07G181 Micromonas commoda HOM05D004249 ORTHO05D005015 8.7e-30 135.6 195 38.5
MELO3C033208.2 Cucumis melo HOM05D004249 ORTHO05D005015 1.1e-27 128.6 75 73.3
AUR62023720 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.4e-27 128.3 97 63.9
THA.LOC104824119 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 3.8e-25 120.2 89 59.6
HPP92_011580 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.2e-23 115.2 69 71.0
PRCOL_00002738 Prasinoderma coloniale HOM05D004249 ORTHO05D005015 6.1e-23 112.8 186 35.5
MBI10_g23575_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.7e-20 104.8 60 70.0
Cre04.g215600 Chlamydomonas reinhardtii HOM05D004249 ORTHO05D005015 6.3e-20 102.8 190 36.3
C08p17510 Brassica napus HOM05D004249 ORTHO05D005015 5.9e-18 96.3 83 55.4
C08p48990 Brassica napus HOM05D004249 ORTHO05D005015 3.2e-16 90.5 82 53.7
Nn1g09453 Nelumbo nucifera HOM05D004249 ORTHO05D005015 2.1e-15 87.8 43 81.4
HPP92_011581 Vanilla planifolia HOM05D004249 ORTHO05D005015 3.9e-14 83.6 54 61.1
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 7.4e-13 79.3 67 55.2
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.3e-12 78.6 75 52.0
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 1.8e-11 74.7 172 31.4
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 1.6e-10 71.6 159 29.6
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 3.5e-10 70.5 146 31.5
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 2.2e-09 67.8 146 33.6
BraA03t09486Z Brassica rapa HOM05D004249 ORTHO05D005015 1.9e-08 64.7 41 65.9
Cfa025661 Carpinus fangiana HOM05D004249 ORTHO05D005015 1.4e-06 58.5 133 29.3


User provided reference genes

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