Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04868 Vaccinium macrocarpon HOM05D002800 ORTHO05D023340 1.1e-83 313.2 150 100.0
CSS0025394 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D023340 1.5e-32 143.3 103 68.0
CSS0031142 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D023340 1.5e-32 143.3 103 68.0
Actinidia32446 Actinidia chinensis HOM05D002800 ORTHO05D023340 3.5e-29 132.1 101 64.4
Thecc.10G075100 Theobroma cacao HOM05D002800 ORTHO05D008563 2.5e-27 125.9 102 63.7
Dinv36436 Davidia involucrata HOM05D002800 ORTHO05D008563 4.3e-27 125.2 102 63.7
CiPaw.01G272300 Carya illinoinensis HOM05D002800 ORTHO05D008563 2.8e-26 122.5 103 61.2
Haze_16886 Corylus avellana HOM05D002800 ORTHO05D008563 1.1e-25 120.6 103 62.1
GSVIVG01016267001 Vitis vinifera HOM05D002800 ORTHO05D008563 1.8e-25 119.8 102 58.8
Atru.chr12.783 Acer truncatum HOM05D002800 ORTHO05D008563 3.4e-24 115.5 102 58.8
Gorai.011G239000 Gossypium raimondii HOM05D002800 ORTHO05D008563 4.5e-24 115.2 102 60.8
Atru.chr12.759 Acer truncatum HOM05D002800 ORTHO05D008563 2.2e-23 112.8 101 58.4
QL08p055739 Quercus lobata HOM05D002800 ORTHO05D008563 2.9e-23 112.5 102 59.8
TWI15G0073 Tripterygium wilfordii HOM05D002800 ORTHO05D008563 8.4e-23 110.9 102 58.8
FvH4_7g19370 Fragaria vesca HOM05D002800 ORTHO05D008563 3.5e-21 105.5 102 52.9
FAN06G4795 Fragaria x ananassa HOM05D002800 ORTHO05D008563 3.5e-21 105.5 102 52.9
FAN10G1943 Fragaria x ananassa HOM05D002800 ORTHO05D008563 3.5e-21 105.5 102 52.9
FAN10G3729 Fragaria x ananassa HOM05D002800 ORTHO05D008563 3.5e-21 105.5 102 52.9
CANSAT56G2733 Cannabis sativa HOM05D002800 ORTHO05D008563 7.9e-21 104.4 102 55.9
MD01G1108200 Malus domestica HOM05D002800 ORTHO05D008563 1.0e-20 104.0 102 54.9
Prupe.2G213100 Prunus persica HOM05D002800 ORTHO05D008563 2.3e-20 102.8 102 53.9
RcHm_v2.0_Chr1g0363251 Rosa chinensis HOM05D002800 ORTHO05D008563 2.3e-20 102.8 102 53.9
Lj1C913T2 Lonicera japonica HOM05D002800 ORTHO05D008563 3.9e-20 102.1 102 52.0
Duzib106G1770 Durio zibethinus HOM05D002800 ORTHO05D008563 8.7e-20 100.9 102 56.9
Nn2g10811 Nelumbo nucifera HOM05D002800 ORTHO05D008563 1.5e-19 100.1 102 51.0
TAR369G0845 Trochodendron aralioides HOM05D002800 ORTHO05D008563 1.5e-19 100.1 103 52.4
Nitab4.5_0001053g0090 Nicotiana tabacum HOM05D002800 ORTHO05D008563 3.3e-19 99.0 126 47.6
FAN03G0883 Fragaria x ananassa HOM05D002800 ORTHO05D008563 9.7e-19 97.4 102 50.0
PGR044G1821 Punica granatum HOM05D002800 ORTHO05D008563 4.8e-18 95.1 102 52.9
Hund20229 Selenicereus undatus HOM05D002800 ORTHO05D008563 6.3e-18 94.7 101 51.5
MBI07_g26016_MAGBIO Magnolia biondii HOM05D002800 ORTHO05D008563 8.2e-18 94.4 102 49.0
SalBow4G0916 Salvia bowleyana HOM05D002800 ORTHO05D008563 1.8e-17 93.2 102 49.0
AUR62006403 Chenopodium quinoa HOM05D002800 ORTHO05D008563 3.1e-17 92.4 102 51.0
Migut.F01983 Erythranthe guttata HOM05D002800 ORTHO05D008563 9.0e-17 90.9 102 51.0
ClCG08G007530 Citrullus lanatus HOM05D002800 ORTHO05D008563 1.5e-16 90.1 103 46.6
Solyc04g005030.4 Solanum lycopersicum HOM05D002800 ORTHO05D008563 2.6e-16 89.4 102 50.0
PGSC0003DMG400001912 Solanum tuberosum HOM05D002800 ORTHO05D008563 3.4e-16 89.0 102 49.0
MELO3C019799.2 Cucumis melo HOM05D002800 ORTHO05D008563 5.9e-16 88.2 103 46.6
Nitab4.5_0002524g0030 Nicotiana tabacum HOM05D002800 ORTHO05D008563 1.0e-15 87.4 102 49.0
Aqoxy1G01227 Aquilegia oxysepala HOM05D002800 ORTHO05D008563 1.7e-15 86.7 102 49.0
Oeu031346.1 Olea europaea HOM05D002800 ORTHO05D008563 1.7e-15 86.7 101 49.5
Psat6g183400 Pisum sativum HOM05D002800 ORTHO05D008563 2.2e-15 86.3 102 43.1
CAN.G839.3 Capsicum annuum HOM05D002800 ORTHO05D008563 2.9e-15 85.9 102 48.0
EL10Ac7g17090 Beta vulgaris HOM05D002800 ORTHO05D008563 3.8e-15 85.5 102 49.0
SGA_v2.0_scaffold42G16019 Striga asiatica HOM05D002800 ORTHO05D023340 5.0e-15 85.1 102 48.0
Lsat_1_v5_gn_2_112341 Lactuca sativa HOM05D002800 ORTHO05D008563 8.5e-15 84.3 120 45.0
Cpa.g.sc53.86 Carica papaya HOM05D002800 ORTHO05D008563 1.4e-14 83.6 68 63.2
CsaV3_6G036460 Cucumis sativus L. HOM05D002800 ORTHO05D008563 4.2e-14 82.0 103 44.7
Eucgr.J01084 Eucalyptus grandis HOM05D002800 ORTHO05D008563 7.2e-14 81.3 103 41.7
Peaxi162Scf01011g00005 Petunia axillaris HOM05D002800 ORTHO05D008563 7.2e-14 81.3 102 47.1
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 4.6e-13 78.6 107 42.1
ECA238G0500 Erigeron canadensis HOM05D002800 ORTHO05D008563 4.6e-13 78.6 99 44.4
TPR.G1920 Trifolium pratense HOM05D002800 ORTHO05D008563 4.6e-13 78.6 102 43.1
Carub.0006s1576 Capsella rubella HOM05D002800 ORTHO05D008563 1.4e-12 77.0 102 46.1
Ah.08g209400 Amaranthus hybridus HOM05D002800 ORTHO05D008563 1.8e-12 76.6 102 43.1
Cc02_g11310 Coffea canephora HOM05D002800 ORTHO05D008563 3.9e-12 75.5 102 44.1
Lj5g0013059 Lotus japonicus HOM05D002800 ORTHO05D008563 3.9e-12 75.5 102 46.1
Medtr1g094980 Medicago truncatula HOM05D002800 ORTHO05D008563 8.8e-12 74.3 102 41.2
Sp6g26690 Schrenkiella parvula HOM05D002800 ORTHO05D008563 7.4e-11 71.2 103 47.6
HanXRQChr14g0456851 Helianthus annuus HOM05D002800 ORTHO05D008563 9.7e-11 70.9 101 40.6
Lalb_Chr02g0142211 Lupinus albus HOM05D002800 ORTHO05D008563 9.7e-11 70.9 103 43.7
Thhalv10012819m.g Eutrema salsugineum HOM05D002800 ORTHO05D008563 1.7e-10 70.1 103 44.7
VMungo0720G2543 Vigna mungo HOM05D002800 ORTHO05D008563 2.2e-10 69.7 107 42.1
THA.LOC104799379 Tarenaya hassleriana HOM05D002800 ORTHO05D008563 2.8e-10 69.3 101 42.6
Phvul.007G094900 Phaseolus vulgaris HOM05D002800 ORTHO05D008563 6.3e-10 68.2 105 41.9
PSO339G3461 Papaver somniferum HOM05D002800 ORTHO05D008563 3.1e-09 65.9 104 43.3
Potri.010G223000 Populus trichocarpa HOM05D002800 ORTHO05D008563 5.3e-09 65.1 112 45.5
CARHR195660 Cardamine hirsuta HOM05D002800 ORTHO05D008563 6.9e-09 64.7 102 43.1
Glyma.10G210700 Glycine max HOM05D002800 ORTHO05D008563 9.1e-09 64.3 100 46.0
PSO384G1174 Papaver somniferum HOM05D002800 ORTHO05D008563 3.4e-08 62.4 104 42.3
Sabra10G0172400 Salix brachista HOM05D002800 ORTHO05D008563 6.5e-07 58.2 123 39.8
ATR0048G007 Amborella trichopoda HOM05D002800 ORTHO05D008563 8.5e-07 57.8 76 42.1
AL6G28620 Arabidopsis lyrata HOM05D002800 ORTHO05D008563 5.5e-06 55.1 68 47.1


User provided reference genes

Program Settings