Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 8.4e-108 393.7 193 100.0
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 1.2e-50 203.8 115 84.3
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.0e-49 199.1 145 73.1
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.0e-49 199.1 145 73.1
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 8.3e-47 191.0 141 70.9
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 1.4e-46 190.3 143 68.5
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.1e-46 189.1 144 68.8
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 3.1e-46 189.1 142 69.7
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 4.1e-46 188.7 144 68.1
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 2.0e-45 186.4 143 65.0
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 2.0e-45 186.4 142 68.3
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 2.7e-45 186.0 162 61.1
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.0e-44 184.1 142 67.6
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 1.3e-44 183.7 141 68.8
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 1.7e-44 183.3 142 66.9
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 2.2e-44 183.0 143 65.7
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 2.9e-44 182.6 149 66.4
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 2.9e-44 182.6 146 66.4
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 8.5e-44 181.0 142 65.5
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 8.5e-44 181.0 141 65.2
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 1.1e-43 180.6 142 66.2
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 1.5e-43 180.3 151 61.6
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 3.2e-43 179.1 147 62.6
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 3.2e-43 179.1 142 64.8
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 4.2e-43 178.7 145 64.1
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 4.2e-43 178.7 155 60.6
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 4.2e-43 178.7 142 64.8
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 5.5e-43 178.3 142 64.1
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 7.2e-43 177.9 142 64.1
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 7.2e-43 177.9 142 64.1
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 7.2e-43 177.9 142 65.5
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 7.2e-43 177.9 142 64.1
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 9.4e-43 177.6 142 64.1
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.2e-42 177.2 165 57.6
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 2.7e-42 176.0 171 56.7
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 2.7e-42 176.0 141 63.1
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 2.7e-42 176.0 142 64.1
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 2.7e-42 176.0 142 64.8
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 4.7e-42 175.3 142 63.4
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.0e-41 174.1 139 61.9
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.0e-41 174.1 142 63.4
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.4e-41 173.7 141 63.1
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 3.0e-41 172.6 142 62.7
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 3.0e-41 172.6 142 62.7
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 8.8e-41 171.0 139 61.9
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 1.2e-40 170.6 162 54.9
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 1.2e-40 170.6 154 57.1
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 1.5e-40 170.2 143 59.4
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 2.0e-40 169.9 143 59.4
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.0e-40 169.9 155 58.7
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 2.0e-40 169.9 141 61.7
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 2.6e-40 169.5 161 55.3
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 2.6e-40 169.5 142 61.3
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 4.4e-40 168.7 142 60.6
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 4.4e-40 168.7 143 58.7
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 4.4e-40 168.7 142 59.9
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 5.7e-40 168.3 142 62.0
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 7.5e-40 167.9 142 60.6
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 7.5e-40 167.9 170 54.7
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 7.5e-40 167.9 142 61.3
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 9.8e-40 167.5 142 61.3
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.3e-39 167.2 142 61.3
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.7e-39 166.8 140 60.0
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 4.9e-39 165.2 142 59.2
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 6.3e-39 164.9 157 54.1
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.1e-38 164.1 170 51.2
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.4e-38 163.7 157 54.1
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 2.4e-38 162.9 136 63.2
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 4.1e-38 162.2 142 59.2
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 9.1e-38 161.0 162 53.7
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 1.2e-37 160.6 130 64.6
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 1.6e-37 160.2 142 58.5
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 1.0e-36 157.5 142 55.6
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.0e-36 157.5 145 57.9
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.0e-36 157.5 142 57.7
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 2.3e-36 156.4 143 59.4
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 4.2e-35 152.1 166 50.0
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 4.2e-35 152.1 143 56.6
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 2.1e-34 149.8 142 57.0
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 4.7e-34 148.7 142 57.0
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 6.1e-34 148.3 143 55.2
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 6.1e-34 148.3 143 55.2
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 8.0e-34 147.9 143 55.2
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.4e-33 147.1 143 54.5
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 1.4e-33 147.1 125 61.6
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 4.4e-32 142.1 143 52.4
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 7.8e-29 131.3 142 46.5
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 7.8e-29 131.3 142 46.5
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 2.9e-28 129.4 113 58.4
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 3.9e-28 129.0 156 43.6
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.6e-28 128.3 155 49.7
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 8.6e-28 127.9 112 61.6
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 8.0e-26 121.3 140 44.3
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 4.0e-25 119.0 71 77.5
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 8.9e-25 117.9 110 56.4
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 8.3e-23 111.3 110 52.7
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 9.2e-22 107.8 67 74.6
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 6.0e-21 105.1 145 37.2
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.0e-20 104.4 119 49.6
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 1.1e-19 100.9 124 44.4
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 1.1e-17 94.4 180 31.1
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 5.2e-17 92.0 127 44.9
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 3.6e-10 69.3 42 81.0
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 3.6e-10 69.3 44 75.0
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 1.1e-09 67.8 140 31.4
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 1.1e-09 67.8 44 75.0
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 1.1e-09 67.8 137 29.9
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 6.8e-09 65.1 41 70.7
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 6.8e-09 65.1 54 61.1
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.6e-08 63.2 55 56.4
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 2.9e-07 59.7 32 84.4
CDE02G0641 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 5.4e-06 55.5 42 66.7


User provided reference genes

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