Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.0e-204 716.5 355 100.0
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 3.1e-156 555.4 360 80.3
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 2.5e-142 509.2 358 73.2
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 7.1e-129 464.5 354 67.2
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.8e-127 459.9 355 66.2
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 3.9e-127 458.8 357 64.7
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 6.7e-127 458.0 365 64.9
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 4.3e-126 455.3 359 68.2
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.4e-124 450.3 358 65.4
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.4e-124 449.5 356 65.7
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.2e-123 447.2 355 64.5
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.2e-123 447.2 355 64.5
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 2.0e-123 446.4 356 63.8
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 2.6e-123 446.0 357 64.4
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 5.8e-123 444.9 355 63.7
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.3e-122 443.7 355 63.7
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 3.8e-122 442.2 355 62.5
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.5e-121 439.5 357 63.3
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 7.1e-121 438.0 377 61.8
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 9.3e-121 437.6 359 64.9
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.2e-120 437.2 356 61.5
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.2e-120 437.2 324 67.6
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 6.0e-120 434.9 355 63.1
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.0e-119 434.1 356 61.2
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.0e-119 434.1 333 66.1
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 2.3e-119 433.0 355 63.9
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 5.1e-119 431.8 357 62.5
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 6.7e-119 431.4 347 64.3
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.5e-118 430.3 324 66.0
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.5e-118 429.5 307 67.8
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 2.1e-117 426.4 358 62.3
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.1e-117 426.4 357 62.7
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.8e-117 426.0 355 60.3
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.4e-116 422.9 369 60.4
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.4e-116 422.9 312 68.6
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.3e-116 421.8 312 64.7
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 6.9e-116 421.4 359 60.4
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 6.9e-116 421.4 356 60.4
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 6.9e-116 421.4 362 61.3
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 5.8e-115 418.3 356 61.5
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 7.6e-115 417.9 323 65.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 7.6e-115 417.9 358 61.5
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.3e-114 417.2 355 60.8
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 2.2e-114 416.4 351 59.5
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.2e-114 416.4 358 60.1
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.2e-114 416.4 355 61.1
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.2e-114 416.4 363 61.2
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 2.9e-114 416.0 355 59.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 6.5e-114 414.8 348 61.5
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 1.1e-113 414.1 355 61.1
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.4e-113 413.7 346 60.1
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 4.2e-113 412.1 328 62.2
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.2e-112 410.6 355 58.9
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.2e-112 410.6 342 62.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.1e-112 409.8 354 59.6
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 4.6e-112 408.7 309 64.1
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 4.6e-112 408.7 357 60.5
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 7.9e-112 407.9 304 64.8
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 7.9e-112 407.9 360 58.3
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.8e-111 406.8 355 58.9
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.0e-111 406.0 307 64.8
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.9e-111 405.6 303 65.0
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 5.1e-111 405.2 356 60.7
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 6.7e-111 404.8 356 58.4
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 1.1e-110 404.1 344 59.3
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.5e-110 403.7 340 60.6
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 5.7e-110 401.7 345 59.4
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 9.7e-110 401.0 354 60.2
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 2.2e-109 399.8 359 59.3
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 4.8e-109 398.7 346 60.1
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 6.3e-109 398.3 331 64.4
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 3.1e-108 396.0 352 57.4
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.1e-108 395.6 327 63.0
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 2.6e-107 392.9 352 58.0
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 3.4e-107 392.5 352 58.0
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 4.5e-107 392.1 360 57.2
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 4.5e-107 392.1 325 61.2
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 8.5e-106 387.9 360 58.3
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.5e-105 386.3 365 55.3
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 7.2e-105 384.8 356 58.1
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 7.9e-104 381.3 355 59.2
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 3.0e-103 379.4 329 59.6
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 6.7e-103 378.3 325 61.5
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 2.0e-102 376.7 294 62.6
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 2.0e-102 376.7 276 64.5
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 5.7e-102 375.2 330 59.7
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 5.7e-102 375.2 330 59.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 7.4e-102 374.8 290 66.6
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.3e-101 374.0 323 61.9
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 9.1e-100 367.9 303 59.4
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.0e-99 366.7 333 56.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 2.0e-99 366.7 311 57.6
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 3.8e-98 362.5 223 75.8
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.1e-96 356.7 239 69.5
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.1e-94 350.9 276 64.1
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.0e-94 350.1 324 55.6
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.1e-92 344.4 357 53.5
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 8.5e-90 334.7 319 52.4
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.6e-88 330.5 304 58.9
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 9.7e-78 294.7 256 60.2
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.1e-76 289.3 232 66.4
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 3.5e-75 286.2 362 46.7
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.2e-70 271.2 364 41.8
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 9.1e-68 261.5 302 45.0
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.0e-66 258.1 215 58.1
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.0e-66 255.8 292 45.5
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.5e-65 254.2 233 60.5
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.6e-64 249.6 304 43.8
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.5e-62 244.2 233 58.4
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 2.4e-60 236.9 317 44.2
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 4.4e-54 216.1 236 42.8
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 9.8e-46 188.3 280 39.3
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 5.4e-44 182.6 161 55.3
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.0e-42 176.8 378 34.9
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 5.4e-36 156.0 182 52.7
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 3.4e-30 136.7 119 53.8
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.4e-28 131.3 169 47.9
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 3.0e-18 97.1 149 44.3
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.3e-17 93.6 168 39.3
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 3.0e-10 70.5 42 69.0
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.3e-09 67.0 33 84.8
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.6e-08 64.7 109 39.4


User provided reference genes

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