Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 8.9e-106 387.1 220 100.0
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.5e-81 306.6 205 85.4
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 2.0e-65 253.1 215 67.0
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 1.2e-57 227.3 216 61.6
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 3.4e-57 225.7 216 61.1
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 1.3e-56 223.8 220 60.9
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 5.0e-56 221.9 219 59.8
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 5.0e-56 221.9 220 60.0
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 6.5e-56 221.5 220 59.5
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 3.2e-55 219.2 216 60.2
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 4.2e-55 218.8 216 59.7
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 7.2e-55 218.0 220 59.5
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 7.2e-55 218.0 216 58.3
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 2.7e-54 216.1 209 58.4
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 4.7e-54 215.3 216 59.3
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 4.7e-54 215.3 216 58.3
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 2.3e-53 213.0 220 59.5
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 2.3e-53 213.0 209 58.9
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 3.9e-53 212.2 217 58.1
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 3.9e-53 212.2 220 57.7
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 5.2e-53 211.8 219 59.4
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 8.8e-53 211.1 224 55.4
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 3.3e-52 209.1 220 55.9
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 4.4e-52 208.8 220 58.2
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 4.8e-51 205.3 219 57.5
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 4.8e-51 205.3 216 54.6
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 4.8e-51 205.3 218 57.3
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 6.3e-51 204.9 219 57.1
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 8.2e-51 204.5 204 57.4
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 3.1e-50 202.6 216 56.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 1.6e-49 200.3 214 56.5
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.6e-49 199.5 218 53.7
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 3.5e-49 199.1 219 56.6
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 4.5e-49 198.7 220 54.5
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 7.7e-49 198.0 219 56.2
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.3e-48 197.2 219 54.8
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 1.3e-48 197.2 219 56.2
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 2.2e-48 196.4 216 57.9
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 3.8e-48 195.7 221 57.0
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 5.0e-48 195.3 219 56.2
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 6.5e-48 194.9 217 55.8
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 1.1e-47 194.1 219 56.2
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 1.1e-47 194.1 217 52.5
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 1.9e-47 193.4 184 61.4
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 5.5e-47 191.8 221 55.2
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 7.2e-47 191.4 218 53.7
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 9.4e-47 191.0 219 53.9
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 4.7e-46 188.7 222 54.5
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 4.7e-46 188.7 220 53.6
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 1.4e-45 187.2 204 52.9
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 1.8e-45 186.8 222 54.5
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 4.0e-45 185.7 221 55.2
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 6.7e-45 184.9 201 55.2
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 3.3e-44 182.6 214 54.7
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 5.7e-44 181.8 217 49.8
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.3e-43 180.6 221 53.8
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.7e-43 180.3 204 54.9
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 4.8e-43 178.7 220 50.5
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 6.3e-43 178.3 220 50.9
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 6.3e-43 178.3 214 53.7
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 8.2e-43 177.9 218 50.9
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 8.2e-43 177.9 218 50.9
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 1.1e-42 177.6 214 53.7
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.8e-42 176.8 219 52.1
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 2.4e-42 176.4 219 53.0
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 4.1e-42 175.6 222 48.6
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 7.0e-42 174.9 217 51.6
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 7.0e-42 174.9 200 49.5
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.6e-41 173.7 217 48.4
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 2.0e-41 173.3 201 48.8
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 2.7e-41 172.9 202 50.0
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 3.5e-41 172.6 217 48.4
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 7.7e-41 171.4 216 47.2
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 1.3e-40 170.6 219 50.7
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 2.9e-40 169.5 220 49.5
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 5.0e-40 168.7 217 47.9
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.1e-39 167.5 217 47.0
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 1.1e-39 167.5 223 48.0
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 1.1e-39 167.5 205 51.7
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 1.9e-39 166.8 215 48.8
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.9e-39 166.8 218 50.9
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.5e-39 166.4 199 49.7
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 3.2e-39 166.0 213 48.4
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 4.2e-39 165.6 218 50.9
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 4.7e-38 162.2 216 49.1
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.0e-37 161.0 213 46.9
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.4e-37 160.6 220 45.0
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 4.0e-37 159.1 219 47.0
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.0e-37 159.1 204 48.0
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 6.8e-37 158.3 218 47.7
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 6.8e-37 158.3 219 47.5
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 2.0e-36 156.8 220 44.1
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 4.4e-36 155.6 204 46.1
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 1.3e-35 154.1 169 53.8
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 6.3e-35 151.8 209 45.5
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 1.8e-34 150.2 219 44.3
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 4.1e-34 149.1 219 44.3
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 5.4e-34 148.7 211 44.5
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 1.6e-33 147.1 222 43.7
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 1.3e-32 144.1 228 43.9
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.3e-32 144.1 217 44.7
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 3.8e-32 142.5 220 44.5
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 8.5e-32 141.4 221 43.4
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.1e-31 141.0 206 41.7
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 2.5e-31 139.8 198 41.4
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 3.2e-31 139.4 216 44.4
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 9.5e-31 137.9 218 43.1
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 1.2e-30 137.5 216 40.7
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 3.6e-30 136.0 224 41.5
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 3.6e-30 136.0 210 42.9
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.8e-29 133.7 149 53.0
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 2.3e-29 133.3 222 40.1
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 4.0e-29 132.5 204 41.2
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 5.2e-29 132.1 196 43.4
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 2.0e-28 130.2 222 37.4
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 5.7e-28 128.6 203 41.4
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 5.7e-28 128.6 225 39.1
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 1.7e-27 127.1 206 40.8
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 2.8e-27 126.3 221 39.8
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.8e-27 126.3 141 53.2
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 8.3e-27 124.8 143 53.1
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 8.3e-27 124.8 203 39.9
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 2.4e-26 123.2 211 40.3
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 3.1e-26 122.9 203 42.4
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 3.1e-26 122.9 222 39.2
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 5.4e-26 122.1 203 42.4
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 5.4e-26 122.1 203 42.4
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 7.0e-26 121.7 213 39.0
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 1.6e-25 120.6 203 41.9
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.6e-25 120.6 199 41.2
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 2.7e-25 119.8 209 40.7
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 2.7e-25 119.8 220 37.3
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 3.5e-25 119.4 197 43.7
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 3.5e-25 119.4 148 49.3
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.3e-24 117.5 211 38.9
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 3.8e-24 115.9 203 41.4
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 6.6e-24 115.2 207 40.1
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 6.6e-24 115.2 224 38.8
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 8.6e-24 114.8 116 54.3
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 2.5e-23 113.2 224 37.1
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 5.6e-23 112.1 205 38.5
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 7.3e-23 111.7 220 41.4
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 3.6e-22 109.4 208 37.0
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 3.6e-22 109.4 215 35.8
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 1.4e-21 107.5 211 37.9
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 2.3e-21 106.7 208 36.1
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 1.3e-19 100.9 214 37.9
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 1.6e-17 94.0 217 35.5
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 2.0e-17 93.6 127 45.7
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 1.3e-16 90.9 218 33.9
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 1.1e-15 87.8 123 44.7
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 4.0e-13 79.3 87 52.9
Phvul.008G182701 Phaseolus vulgaris HOM05D004648 ORTHO05D307582 8.1e-06 55.1 92 39.1


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