Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 9.4e-89 332.0 240 100.0
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 5.9e-59 233.0 242 80.6
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.2e-40 172.2 175 60.0
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.8e-39 168.3 173 59.5
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 8.6e-34 149.4 169 55.0
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 5.8e-30 136.7 168 53.6
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 2.2e-29 134.8 162 51.9
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 7.1e-28 129.8 159 52.2
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 7.1e-28 129.8 159 52.2
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.2e-27 129.0 146 54.1
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.2e-27 129.0 159 52.2
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 4.3e-25 120.6 173 46.2
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.6e-24 118.6 172 47.1
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 2.8e-24 117.9 172 48.3
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 6.2e-24 116.7 173 45.7
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.5e-22 112.1 175 42.9
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 4.4e-22 110.5 175 42.3
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 4.4e-22 110.5 170 45.9
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.3e-21 109.0 165 44.8
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.9e-21 107.8 155 42.6
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.1e-20 105.9 169 43.2
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 2.4e-20 104.8 175 40.6
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 7.1e-20 103.2 163 43.6
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 7.1e-20 103.2 173 42.2
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.2e-19 102.4 152 42.1
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 2.7e-19 101.3 183 40.4
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 3.5e-19 100.9 166 42.2
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 3.5e-19 100.9 158 44.9
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 4.6e-19 100.5 166 43.4
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.6e-19 100.5 178 43.8
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.0e-18 99.4 158 44.9
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 1.7e-18 98.6 177 40.1
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.7e-18 98.6 166 39.2
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.7e-18 98.6 188 39.4
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.1e-17 95.9 165 43.6
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.9e-17 95.1 175 38.9
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.9e-17 95.1 175 38.9
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 1.6e-16 92.0 166 41.0
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 2.8e-16 91.3 159 37.7
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 3.6e-16 90.9 249 54.2
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 3.6e-16 90.9 159 42.1
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 3.6e-16 90.9 184 41.3
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 6.2e-16 90.1 157 42.7
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 8.1e-16 89.7 159 39.6
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 1.8e-15 88.6 155 40.6
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.2e-14 85.9 181 34.8
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 2.6e-14 84.7 207 51.7
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 7.6e-14 83.2 170 38.2
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 9.9e-14 82.8 159 40.3
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 1.7e-13 82.0 154 40.3
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 2.2e-13 81.6 162 34.6
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 4.9e-13 80.5 165 38.8
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 8.4e-13 79.7 152 39.5
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 8.4e-13 79.7 149 39.6
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 1.1e-12 79.3 208 52.9
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 1.9e-12 78.6 171 38.0
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 2.4e-12 78.2 160 38.8
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 2.4e-12 78.2 164 38.4
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 3.2e-12 77.8 162 35.2
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 4.2e-12 77.4 119 44.5
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 4.2e-12 77.4 65 63.1
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 9.3e-12 76.3 169 40.2
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 1.2e-11 75.9 159 34.6
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 1.2e-11 75.9 173 36.4
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.2e-11 75.9 166 38.0
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 1.6e-11 75.5 245 51.0
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 2.1e-11 75.1 162 34.6
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 2.1e-11 75.1 161 33.5
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.1e-11 75.1 157 39.5
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 2.7e-11 74.7 163 33.1
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 2.7e-11 74.7 158 38.0
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 3.5e-11 74.3 164 32.9
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 4.6e-11 73.9 162 35.2
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 4.6e-11 73.9 164 32.9
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 6.0e-11 73.6 171 37.4
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 6.0e-11 73.6 158 37.3
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 1.0e-10 72.8 161 33.5
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.0e-10 72.8 165 36.4
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 1.7e-10 72.0 168 36.3
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 3.9e-10 70.9 156 39.7
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 6.6e-10 70.1 77 51.9
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.1e-09 69.3 127 45.7
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.1e-09 69.3 160 33.8
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 3.3e-09 67.8 73 54.8
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 4.3e-09 67.4 163 33.7
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 7.3e-09 66.6 73 52.1
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 7.3e-09 66.6 43 74.4
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 3.6e-08 64.3 159 36.5
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 4.8e-08 63.9 146 34.2
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 6.2e-08 63.5 160 32.5
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 1.1e-07 62.8 89 42.7
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 1.1e-07 62.8 164 32.3
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 2.4e-07 61.6 98 41.8
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 3.1e-07 61.2 133 38.3
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 3.1e-07 61.2 161 31.7
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 5.3e-07 60.5 121 41.3
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 1.2e-06 59.3 149 32.9
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.5e-06 58.9 93 40.9
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 2.6e-06 58.2 95 38.9
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 4.5e-06 57.4 171 31.0
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 7.6e-06 56.6 96 40.6


User provided reference genes

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