Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 9.8e-38 159.5 71 100.0
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.0e-31 139.4 71 87.3
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 5.2e-31 137.1 71 87.3
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 1.1e-23 112.8 81 67.9
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 6.8e-23 110.2 75 72.0
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 2.6e-22 108.2 74 68.9
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 9.8e-22 106.3 71 70.4
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 8.3e-21 103.2 72 63.9
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 2.1e-19 98.6 71 64.8
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 6.0e-19 97.1 70 60.0
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.3e-18 95.9 71 62.0
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 5.1e-18 94.0 49 73.5
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 1.1e-17 92.8 71 57.7
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 2.5e-17 91.7 71 63.4
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 4.3e-17 90.9 71 54.9
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 9.5e-17 89.7 71 59.2
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 9.5e-17 89.7 67 56.7
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 1.2e-16 89.4 71 54.9
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 1.2e-16 89.4 69 56.5
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 1.6e-16 89.0 70 54.3
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 2.1e-16 88.6 70 55.7
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 4.7e-16 87.4 55 65.5
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 1.1e-15 86.3 55 63.6
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 1.8e-15 85.5 73 58.9
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.3e-15 85.1 71 53.5
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 2.3e-15 85.1 71 53.5
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 6.8e-15 83.6 71 53.5
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 8.9e-15 83.2 47 68.1
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 1.5e-14 82.4 71 53.5
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 2.0e-14 82.0 70 48.6
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 2.0e-14 82.0 63 55.6
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.6e-14 81.6 53 62.3
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.6e-14 81.6 53 62.3
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 2.6e-14 81.6 53 62.3
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 2.2e-13 78.6 71 47.9
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 2.2e-13 78.6 45 64.4
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 2.9e-13 78.2 65 46.2
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 4.9e-13 77.4 52 59.6
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 4.9e-13 77.4 67 49.3
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 4.9e-13 77.4 57 54.4
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 8.3e-13 76.6 70 48.6
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 8.3e-13 76.6 68 51.5
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 1.4e-12 75.9 52 55.8
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 1.4e-12 75.9 47 59.6
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 1.9e-12 75.5 61 49.2
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.9e-12 75.5 67 49.3
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 1.9e-12 75.5 71 49.3
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 2.4e-12 75.1 56 50.0
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 3.2e-12 74.7 68 47.1
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 3.2e-12 74.7 53 52.8
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 7.1e-12 73.6 53 52.8
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 9.2e-12 73.2 43 60.5
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 9.2e-12 73.2 45 60.0
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 9.2e-12 73.2 53 49.1
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 1.6e-11 72.4 53 49.1
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 1.6e-11 72.4 52 53.8
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 2.1e-11 72.0 52 51.9
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 2.1e-11 72.0 52 51.9
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 2.1e-11 72.0 56 50.0
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 2.7e-11 71.6 52 50.0
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 3.5e-11 71.2 43 55.8
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 3.5e-11 71.2 48 52.1
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 3.5e-11 71.2 59 45.8
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 3.5e-11 71.2 67 49.3
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 6.0e-11 70.5 42 61.9
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 6.0e-11 70.5 64 46.9
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 6.0e-11 70.5 59 47.5
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 6.0e-11 70.5 43 55.8
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 6.0e-11 70.5 53 50.9
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 7.8e-11 70.1 47 55.3
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 7.8e-11 70.1 53 50.9
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 7.8e-11 70.1 52 48.1
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 7.8e-11 70.1 50 54.0
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.0e-10 69.7 52 50.0
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.0e-10 69.7 52 50.0
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 1.0e-10 69.7 52 50.0
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.0e-10 69.7 46 63.0
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 1.3e-10 69.3 43 55.8
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 1.3e-10 69.3 43 58.1
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 2.3e-10 68.6 52 50.0
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 3.0e-10 68.2 53 49.1
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 3.9e-10 67.8 68 39.7
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 3.9e-10 67.8 43 55.8
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 5.1e-10 67.4 43 55.8
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 6.6e-10 67.0 52 48.1
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 1.1e-09 66.2 43 53.5
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.1e-09 66.2 45 62.2
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 1.9e-09 65.5 62 46.8
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 1.9e-09 65.5 62 46.8
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 4.3e-09 64.3 63 39.7
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 4.3e-09 64.3 44 61.4
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 4.3e-09 64.3 43 53.5
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 5.6e-09 63.9 43 51.2
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 1.2e-08 62.8 49 46.9
Nn5g28989 Nelumbo nucifera HOM05D007587 ORTHO05D009657 8.9e-07 56.6 32 68.8


User provided reference genes

Program Settings