Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.9e-37 157.1 71 100.0
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 3.8e-34 147.5 71 91.5
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 3.1e-31 137.9 71 87.3
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 1.2e-24 115.9 81 66.7
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 4.7e-24 114.0 74 70.3
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 6.2e-24 113.6 75 70.7
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 2.3e-23 111.7 71 71.8
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 6.8e-23 110.2 72 66.7
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 5.4e-20 100.5 71 62.0
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 2.1e-19 98.6 71 60.6
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 3.5e-19 97.8 64 67.2
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 3.5e-19 97.8 71 62.0
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 4.6e-19 97.4 55 72.7
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 1.0e-18 96.3 56 66.1
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 1.0e-18 96.3 55 70.9
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 3.9e-18 94.4 71 56.3
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.9e-17 92.0 71 57.7
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 1.9e-17 92.0 71 53.5
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 2.5e-17 91.7 67 58.2
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 3.3e-17 91.3 70 57.1
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 5.6e-17 90.5 73 58.9
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 2.1e-16 88.6 70 54.3
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 2.8e-16 88.2 71 56.3
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 3.6e-16 87.8 71 53.5
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 4.7e-16 87.4 71 49.3
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.3e-15 85.1 53 62.3
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.3e-15 85.1 53 62.3
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 2.3e-15 85.1 53 62.3
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 5.2e-15 84.0 55 58.2
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.2e-14 82.8 71 50.7
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 2.0e-14 82.0 43 69.8
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 4.4e-14 80.9 71 45.1
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 7.5e-14 80.1 71 49.3
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 7.5e-14 80.1 55 54.5
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 7.5e-14 80.1 71 43.7
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.7e-13 79.0 69 53.6
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 1.7e-13 79.0 63 54.0
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 2.2e-13 78.6 45 62.2
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 4.9e-13 77.4 44 65.9
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 8.3e-13 76.6 49 59.2
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 8.3e-13 76.6 46 63.0
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 1.1e-12 76.3 57 52.6
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 1.9e-12 75.5 68 48.5
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 2.4e-12 75.1 56 50.0
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 3.2e-12 74.7 50 52.0
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 4.1e-12 74.3 43 62.8
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 4.1e-12 74.3 53 52.8
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 9.2e-12 73.2 47 55.3
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 9.2e-12 73.2 53 52.8
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 9.2e-12 73.2 53 47.2
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 1.2e-11 72.8 43 60.5
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 1.6e-11 72.4 47 55.3
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.6e-11 72.4 68 51.5
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 2.1e-11 72.0 52 50.0
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 2.7e-11 71.6 53 52.8
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 2.7e-11 71.6 43 58.1
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 2.7e-11 71.6 43 60.5
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 2.7e-11 71.6 56 50.0
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 3.5e-11 71.2 43 55.8
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 3.5e-11 71.2 43 55.8
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 3.5e-11 71.2 59 49.2
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 4.6e-11 70.9 47 55.3
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 4.6e-11 70.9 43 55.8
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 4.6e-11 70.9 45 57.8
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 4.6e-11 70.9 46 63.0
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 6.0e-11 70.5 49 51.0
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 6.0e-11 70.5 60 48.3
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 7.8e-11 70.1 61 45.9
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 7.8e-11 70.1 68 45.6
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 7.8e-11 70.1 70 45.7
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 1.0e-10 69.7 55 50.9
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 1.3e-10 69.3 43 55.8
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 1.7e-10 68.9 43 53.5
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.7e-10 68.9 43 55.8
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.7e-10 68.9 43 55.8
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 1.7e-10 68.9 43 55.8
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 1.7e-10 68.9 53 49.1
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 3.0e-10 68.2 47 53.2
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 5.1e-10 67.4 43 55.8
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 5.1e-10 67.4 43 55.8
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 6.6e-10 67.0 67 47.8
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 1.1e-09 66.2 53 47.2
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.5e-09 65.9 65 43.1
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 2.5e-09 65.1 43 53.5
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 3.3e-09 64.7 43 53.5
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 5.6e-09 63.9 43 51.2
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 7.3e-09 63.5 45 60.0
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 1.2e-08 62.8 49 46.9
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 2.1e-08 62.0 62 43.5
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 2.1e-08 62.0 62 43.5
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 2.8e-08 61.6 44 59.1
Nn5g28989 Nelumbo nucifera HOM05D007587 ORTHO05D009657 8.9e-07 56.6 32 65.6


User provided reference genes

Program Settings