Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04604 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 2.7e-127 458.8 242 100.0
CSS0032884 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 1.9e-85 319.7 252 67.5
Dinv44924 Davidia involucrata HOM05D004812 ORTHO05D005721 1.9e-85 319.7 242 66.9
Rhsim07G0216800 Rhododendron simsii HOM05D004812 ORTHO05D005721 1.6e-84 316.6 363 52.6
Cfa013725 Carpinus fangiana HOM05D004812 ORTHO05D005721 1.1e-83 313.9 235 66.8
Haze_22372 Corylus avellana HOM05D004812 ORTHO05D005721 1.1e-83 313.9 235 66.4
Duzib041G0236 Durio zibethinus HOM05D004812 ORTHO05D005721 9.9e-82 307.4 221 69.2
CiPaw.07G171000 Carya illinoinensis HOM05D004812 ORTHO05D005721 2.9e-81 305.8 233 67.4
Prupe.1G418000 Prunus persica HOM05D004812 ORTHO05D005721 3.8e-81 305.4 236 64.8
Thecc.08G083100 Theobroma cacao HOM05D004812 ORTHO05D005721 4.9e-81 305.1 222 68.5
TAR381G1267 Trochodendron aralioides HOM05D004812 ORTHO05D005721 6.4e-81 304.7 233 64.8
QL09p016104 Quercus lobata HOM05D004812 ORTHO05D005721 3.2e-80 302.4 236 64.4
Hma1.2p1_1230F.1_g268750 Hydrangea macrophylla HOM05D004812 ORTHO05D005721 4.2e-80 302.0 245 64.1
CiPaw.08G053200 Carya illinoinensis HOM05D004812 ORTHO05D005721 9.3e-80 300.8 234 66.2
Manes.05G184100 Manihot esculenta HOM05D004812 ORTHO05D005721 9.3e-80 300.8 237 67.5
Duzib041G0573 Durio zibethinus HOM05D004812 ORTHO05D005721 6.0e-79 298.1 209 70.3
Potri.002G114600 Populus trichocarpa HOM05D004812 ORTHO05D005721 1.3e-78 297.0 222 67.1
Atru.chr13.882 Acer truncatum HOM05D004812 ORTHO05D005721 1.7e-78 296.6 232 65.5
Duzib093G1850 Durio zibethinus HOM05D004812 ORTHO05D005721 1.7e-78 296.6 222 67.1
ClCG08G016760 Citrullus lanatus HOM05D004812 ORTHO05D005721 3.0e-78 295.8 239 66.1
Sabra02G0090600 Salix brachista HOM05D004812 ORTHO05D005721 3.0e-78 295.8 236 64.0
FvH4_2g32490 Fragaria vesca HOM05D004812 ORTHO05D005721 6.6e-78 294.7 222 64.9
MELO3C010780.2 Cucumis melo HOM05D004812 ORTHO05D005721 8.7e-78 294.3 241 66.0
CsaV3_2G025860 Cucumis sativus L. HOM05D004812 ORTHO05D005721 1.1e-77 293.9 241 65.6
GSVIVG01009286001 Vitis vinifera HOM05D004812 ORTHO05D005721 3.3e-77 292.4 245 66.9
Cc10_g07760 Coffea canephora HOM05D004812 ORTHO05D005721 4.3e-77 292.0 247 62.8
Ciclev10002309m.g Citrus clementina HOM05D004812 ORTHO05D005721 9.6e-77 290.8 239 68.6
Gorai.009G222500 Gossypium raimondii HOM05D004812 ORTHO05D005721 1.6e-76 290.0 233 63.5
MD08G1076700 Malus domestica HOM05D004812 ORTHO05D005721 2.8e-76 289.3 236 67.8
Sed0005944 Sechium edule HOM05D004812 ORTHO05D005721 6.2e-76 288.1 238 66.8
Actinidia19286 Actinidia chinensis HOM05D004812 ORTHO05D005721 1.4e-75 287.0 252 62.3
Actinidia29636 Actinidia chinensis HOM05D004812 ORTHO05D005721 2.4e-75 286.2 227 67.0
Cpa.g.sc160.27 Carica papaya HOM05D004812 ORTHO05D005721 3.1e-75 285.8 222 65.8
CAN.G416.6 Capsicum annuum HOM05D004812 ORTHO05D005721 4.0e-75 285.4 232 69.4
Potri.005G146600 Populus trichocarpa HOM05D004812 ORTHO05D005721 4.0e-75 285.4 239 61.1
Lj4A77G54 Lonicera japonica HOM05D004812 ORTHO05D005721 6.9e-75 284.6 269 58.7
FAN15G0694 Fragaria x ananassa HOM05D004812 ORTHO05D005721 2.0e-74 283.1 242 59.5
Nitab4.5_0001494g0140 Nicotiana tabacum HOM05D004812 ORTHO05D005721 2.0e-74 283.1 232 68.5
Peaxi162Scf01161g00329 Petunia axillaris HOM05D004812 ORTHO05D005721 2.6e-74 282.7 229 62.9
MD15G1064000 Malus domestica HOM05D004812 ORTHO05D005721 4.5e-74 282.0 241 64.7
Sopen04g031020 Solanum pennellii HOM05D004812 ORTHO05D005721 5.8e-74 281.6 232 69.0
Gohir.D06G024100 Gossypium hirsutum HOM05D004812 ORTHO05D005721 7.6e-74 281.2 233 62.7
Gorai.010G028600 Gossypium raimondii HOM05D004812 ORTHO05D005721 7.6e-74 281.2 233 62.7
Gohir.A05G212600 Gossypium hirsutum HOM05D004812 ORTHO05D005721 9.9e-74 280.8 233 61.8
MSTRG.25014 Avicennia marina HOM05D004812 ORTHO05D005721 1.3e-73 280.4 230 62.6
Gohir.A06G026800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 1.7e-73 280.0 233 62.7
arahy.Tifrunner.gnm1.ann1.4PX4MG Arachis hypogaea HOM05D004812 ORTHO05D005721 2.2e-73 279.6 221 62.4
MSTRG.923 Avicennia marina HOM05D004812 ORTHO05D005721 2.9e-73 279.3 238 61.8
Solyc04g077430.4 Solanum lycopersicum HOM05D004812 ORTHO05D005721 2.9e-73 279.3 232 68.5
RcHm_v2.0_Chr6g0310161 Rosa chinensis HOM05D004812 ORTHO05D005721 4.9e-73 278.5 234 65.4
Dinv39198 Davidia involucrata HOM05D004812 ORTHO05D005721 1.4e-72 276.9 205 68.3
Nn6g34543 Nelumbo nucifera HOM05D004812 ORTHO05D005721 3.2e-72 275.8 243 61.3
Glyma.04G048400 Glycine max HOM05D004812 ORTHO05D005721 6.0e-71 271.6 209 63.2
Lalb_Chr23g0267661 Lupinus albus HOM05D004812 ORTHO05D005721 6.0e-71 271.6 220 61.4
TWI56G0383 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 6.0e-71 271.6 224 62.1
ECA232G4694 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-70 270.4 246 57.3
MBI16_g36640_MAGBIO Magnolia biondii HOM05D004812 ORTHO05D005721 1.8e-70 270.0 241 58.1
Ca_15883_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 6.7e-70 268.1 214 66.8
VMungo1309G0464 Vigna mungo HOM05D004812 ORTHO05D005721 1.1e-69 267.3 218 61.5
Lj5g0016152 Lotus japonicus HOM05D004812 ORTHO05D005721 2.5e-69 266.2 206 68.9
arahy.Tifrunner.gnm1.ann1.HYM163 Arachis hypogaea HOM05D004812 ORTHO05D005721 3.3e-69 265.8 218 65.1
CANSAT11G0724 Cannabis sativa HOM05D004812 ORTHO05D005721 3.3e-69 265.8 254 61.8
Glyma.06G049600 Glycine max HOM05D004812 ORTHO05D005721 3.3e-69 265.8 213 62.0
Psat5g042400 Pisum sativum HOM05D004812 ORTHO05D005721 4.3e-69 265.4 217 63.1
arahy.Tifrunner.gnm1.ann1.PWJU0J Arachis hypogaea HOM05D004812 ORTHO05D005721 5.6e-69 265.0 218 65.6
Ca_06989_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 2.1e-68 263.1 207 65.2
Nitab4.5_0024059g0010 Nicotiana tabacum HOM05D004812 ORTHO05D005721 2.8e-68 262.7 171 81.3
Lj1g0006267 Lotus japonicus HOM05D004812 ORTHO05D005721 3.7e-68 262.3 222 57.2
Aqoxy6G02958 Aquilegia oxysepala HOM05D004812 ORTHO05D005721 6.2e-68 261.5 225 59.1
Lalb_Chr24g0399541 Lupinus albus HOM05D004812 ORTHO05D005721 6.2e-68 261.5 203 67.0
Lsat_1_v5_gn_9_79341 Lactuca sativa HOM05D004812 ORTHO05D005721 8.1e-68 261.2 252 56.3
Migut.N02802 Erythranthe guttata HOM05D004812 ORTHO05D005721 1.8e-67 260.0 239 57.3
Ah.05g166930 Amaranthus hybridus HOM05D004812 ORTHO05D005721 3.1e-67 259.2 238 59.2
PGR031G3368 Punica granatum HOM05D004812 ORTHO05D005721 3.1e-67 259.2 234 61.5
Hund05266 Selenicereus undatus HOM05D004812 ORTHO05D005721 3.1e-67 259.2 226 62.8
SGA_v2.0_scaffold238G43884 Striga asiatica HOM05D004812 ORTHO05D005721 5.3e-67 258.5 295 52.9
Glyma.14G090500 Glycine max HOM05D004812 ORTHO05D005721 1.5e-66 256.9 202 61.4
Manes.18G050200 Manihot esculenta HOM05D004812 ORTHO05D005721 2.0e-66 256.5 178 74.2
Oeu048563.2 Olea europaea HOM05D004812 ORTHO05D005721 2.6e-66 256.1 241 61.4
TWI36G1081 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 5.8e-66 255.0 234 57.3
EL10Ac1g02340 Beta vulgaris HOM05D004812 ORTHO05D005721 7.6e-66 254.6 227 59.5
Gohir.D05G215800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 3.8e-65 252.3 210 60.5
TPR.G30200 Trifolium pratense HOM05D004812 ORTHO05D005721 3.8e-65 252.3 218 62.4
Medtr3g103530 Medicago truncatula HOM05D004812 ORTHO05D005721 4.9e-65 251.9 211 63.0
Migut.C00441 Erythranthe guttata HOM05D004812 ORTHO05D005721 1.1e-64 250.8 238 55.9
TPR.G13010 Trifolium pratense HOM05D004812 ORTHO05D005721 1.1e-64 250.8 227 59.5
FAN27G1358 Fragaria x ananassa HOM05D004812 ORTHO05D005721 1.4e-64 250.4 219 57.1
Psat6g018520 Pisum sativum HOM05D004812 ORTHO05D005721 2.5e-64 249.6 226 57.5
CARHR259230 Cardamine hirsuta HOM05D004812 ORTHO05D005721 3.2e-64 249.2 221 57.5
THA.LOC104799834 Tarenaya hassleriana HOM05D004812 ORTHO05D005721 3.2e-64 249.2 239 56.1
FAN20G0597 Fragaria x ananassa HOM05D004812 ORTHO05D005721 4.2e-64 248.8 219 56.6
FAN24G1448 Fragaria x ananassa HOM05D004812 ORTHO05D005721 5.5e-64 248.4 219 56.6
Medtr1g017260 Medicago truncatula HOM05D004812 ORTHO05D005721 2.1e-63 246.5 226 57.5
Eucgr.F02213 Eucalyptus grandis HOM05D004812 ORTHO05D005721 7.9e-63 244.6 235 57.0
Sc02g0008200 Simmondsia chinensis HOM05D004812 ORTHO05D005721 1.0e-62 244.2 169 71.6
AL6G41350 Arabidopsis lyrata HOM05D004812 ORTHO05D005721 2.3e-62 243.0 235 54.9
Thhalv10028923m.g Eutrema salsugineum HOM05D004812 ORTHO05D005721 6.7e-62 241.5 234 54.7
Phvul.001G031700 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 6.7e-62 241.5 197 59.4
Aa31sc619G20 Aethionema arabicum HOM05D004812 ORTHO05D005721 1.5e-61 240.4 215 56.3
PSO541G3106 Papaver somniferum HOM05D004812 ORTHO05D005721 2.5e-61 239.6 236 55.5
Sp6g10230 Schrenkiella parvula HOM05D004812 ORTHO05D005721 3.3e-61 239.2 235 53.2
HanXRQChr08g0226381 Helianthus annuus HOM05D004812 ORTHO05D005721 2.1e-60 236.5 240 54.2
BcaB01g02879 Brassica carinata HOM05D004812 ORTHO05D005721 2.8e-60 236.1 234 53.4
Eucgr.F00104 Eucalyptus grandis HOM05D004812 ORTHO05D005721 6.2e-60 235.0 229 53.3
PSO675G4508 Papaver somniferum HOM05D004812 ORTHO05D005721 8.2e-60 234.6 230 55.7
BcaC01g04783 Brassica carinata HOM05D004812 ORTHO05D005721 2.4e-59 233.0 237 53.2
CDE02G0400 Ceratophyllum demersum HOM05D004812 ORTHO05D005721 4.1e-59 232.3 233 60.1
ATR0019G011 Amborella trichopoda HOM05D004812 ORTHO05D005721 5.3e-59 231.9 179 73.2
C03p33720 Brassica napus HOM05D004812 ORTHO05D005721 6.9e-59 231.5 237 53.2
HanXRQChr04g0110461 Helianthus annuus HOM05D004812 ORTHO05D005721 1.2e-58 230.7 222 55.9
Carub.0006s2656 Capsella rubella HOM05D004812 ORTHO05D005721 1.5e-58 230.3 216 55.1
Rhsim06G0065600 Rhododendron simsii HOM05D004812 ORTHO05D005721 7.6e-58 228.0 233 56.2
AT4G07990 Arabidopsis thaliana HOM05D004812 ORTHO05D005721 7.2e-56 221.5 234 53.8
COL.COLO4_28448 Corchorus olitorius HOM05D004812 ORTHO05D005721 2.3e-54 216.5 128 79.7
Os03g0728100 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 3.9e-54 215.7 221 49.8
Sabra05G0117000 Salix brachista HOM05D004812 ORTHO05D005721 5.1e-54 215.3 204 56.9
AUR62039348 Chenopodium quinoa HOM05D004812 ORTHO05D005721 6.7e-54 214.9 241 50.2
arahy.Tifrunner.gnm1.ann1.FJ07HR Arachis hypogaea HOM05D004812 ORTHO05D005721 1.1e-53 214.2 128 78.1
unitig_744.g24118 Utricularia gibba HOM05D004812 ORTHO05D005721 1.1e-53 214.2 238 53.4
PGR083G2836 Punica granatum HOM05D004812 ORTHO05D005721 2.5e-53 213.0 232 51.3
PGSC0003DMG400004945 Solanum tuberosum HOM05D004812 ORTHO05D005721 5.7e-53 211.8 187 60.4
Oeu038874.1 Olea europaea HOM05D004812 ORTHO05D005721 8.2e-52 208.0 147 66.0
Duzib041G0112 Durio zibethinus HOM05D004812 ORTHO05D005721 2.4e-51 206.5 129 76.0
CSS0043183 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 1.9e-48 196.8 195 62.1
ECA247G0897 Erigeron canadensis HOM05D004812 ORTHO05D005721 1.2e-47 194.1 175 59.4
VMungo0647G0241 Vigna mungo HOM05D004812 ORTHO05D005721 3.0e-46 189.5 355 36.3
Zm00001eb215650 Zea mays HOM05D004812 ORTHO05D005721 1.1e-43 181.0 214 44.9
HPP92_028656 Vanilla planifolia HOM05D004812 ORTHO05D005721 3.1e-43 179.5 180 54.4
Zm00001eb299310 Zea mays HOM05D004812 ORTHO05D005721 2.6e-42 176.4 227 45.4
vmacro21405 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 2.5e-40 169.9 194 52.6
Medtr3g103520 Medicago truncatula HOM05D004812 ORTHO05D005721 6.7e-38 161.8 190 48.4
Os07g0124800 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 4.4e-37 159.1 204 45.1
BolC3t15691H Brassica oleracea HOM05D004812 ORTHO05D005721 1.3e-36 157.5 183 48.1
A03p27930 Brassica napus HOM05D004812 ORTHO05D005721 4.8e-36 155.6 183 47.5
BraA03t12006Z Brassica rapa HOM05D004812 ORTHO05D005721 4.8e-36 155.6 183 47.5
AUR62034973 Chenopodium quinoa HOM05D004812 ORTHO05D005721 2.9e-33 146.4 183 47.0
Glyma.17G232245 Glycine max HOM05D004812 ORTHO05D005721 1.4e-19 100.9 100 52.0
Mapoly0153s0040 Marchantia polymorpha HOM05D004812 ORTHO05D005721 9.1e-19 98.2 195 34.9
HPP92_011733 Vanilla planifolia HOM05D004812 ORTHO05D005721 8.5e-17 91.7 63 65.1
HanXRQChr08g0231951 Helianthus annuus HOM05D004812 ORTHO05D005721 1.1e-16 91.3 72 58.3
Mapoly0001s0190 Marchantia polymorpha HOM05D004812 ORTHO05D005721 2.1e-15 87.0 140 35.7
Phvul.L001695 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 3.0e-14 83.2 79 53.2
AagrBONN_evm.TU.Sc2ySwM_344.5440 Anthoceros agrestis HOM05D004812 ORTHO05D005721 2.6e-13 80.1 172 36.0
Glyma.14G121300 Glycine max HOM05D004812 ORTHO05D005721 1.3e-12 77.8 63 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2797 Anthoceros agrestis HOM05D004812 ORTHO05D005721 2.8e-12 76.6 173 32.9
Pp3c17_7620 Physcomitrium patens HOM05D004812 ORTHO05D005721 4.9e-12 75.9 185 28.6
Actinidia19589 Actinidia chinensis HOM05D004812 ORTHO05D005721 8.3e-12 75.1 44 81.8
SEGI_24355 Sequoiadendron giganteum HOM05D004812 ORTHO05D005721 4.1e-11 72.8 57 59.6
HPP92_017697 Vanilla planifolia HOM05D001988 ORTHO05D006298 2.0e-10 70.5 44 72.7
SMO351G0516 Selaginella moellendorffii HOM05D004812 ORTHO05D005721 2.7e-10 70.1 188 27.7
HPP92_017696 Vanilla planifolia HOM05D004812 ORTHO05D005721 5.9e-10 68.9 95 43.2
Duzib041G0506 Durio zibethinus HOM05D004812 ORTHO05D005721 2.9e-09 66.6 80 50.0
arahy.Tifrunner.gnm1.ann1.BXCF5W Arachis hypogaea HOM05D005011 ORTHO05D006443 8.0e-07 58.5 65 41.5
CiPaw.09G177600 Carya illinoinensis HOM05D005011 ORTHO05D006443 4.0e-06 56.2 64 40.6
Duzib168G2094 Durio zibethinus HOM05D000175 ORTHO05D000481 4.0e-06 56.2 56 46.4
MCO08G161 Micromonas commoda HOM05D000175 ORTHO05D000481 4.0e-06 56.2 61 45.9
Nitab4.5_0005191g0060 Nicotiana tabacum HOM05D000175 ORTHO05D000481 4.0e-06 56.2 62 41.9
Solyc07g053615.1 Solanum lycopersicum HOM05D000175 ORTHO05D000481 4.0e-06 56.2 62 41.9
Sopen07g027570 Solanum pennellii HOM05D000175 ORTHO05D000481 4.0e-06 56.2 62 41.9
PGSC0003DMG400009379 Solanum tuberosum HOM05D000175 ORTHO05D000481 4.0e-06 56.2 62 41.9
Zm00001eb118880 Zea mays HOM05D000175 ORTHO05D000481 4.0e-06 56.2 62 43.5
arahy.Tifrunner.gnm1.ann1.P0ZPTX Arachis hypogaea HOM05D005011 ORTHO05D006443 5.2e-06 55.8 65 40.0
Cfa013208 Carpinus fangiana HOM05D000175 ORTHO05D000481 5.2e-06 55.8 62 45.2
Pp3c2_9790 Physcomitrium patens HOM05D005011 ORTHO05D006443 5.2e-06 55.8 64 45.3
Prupe.1G466900 Prunus persica HOM05D000175 ORTHO05D000481 6.8e-06 55.5 62 43.5
SEGI_03168 Sequoiadendron giganteum HOM05D000175 ORTHO05D000481 6.8e-06 55.5 62 45.2
SEGI_23178 Sequoiadendron giganteum HOM05D000175 ORTHO05D000481 6.8e-06 55.5 62 45.2
EL10Ac2g02540 Beta vulgaris HOM05D000175 ORTHO05D000481 8.9e-06 55.1 47 51.1
Haze_21622 Corylus avellana HOM05D000175 ORTHO05D010751 8.9e-06 55.1 62 45.2
MCO02G050 Micromonas commoda HOM05D000175 ORTHO05D000481 8.9e-06 55.1 62 40.3
Nn2g13067 Nelumbo nucifera HOM05D005011 ORTHO05D006443 8.9e-06 55.1 93 38.7
Nitab4.5_0000621g0080 Nicotiana tabacum HOM05D000175 ORTHO05D000481 8.9e-06 55.1 62 40.3
Peaxi162Scf00845g00119 Petunia axillaris HOM05D000175 ORTHO05D000481 8.9e-06 55.1 62 41.9
HPP92_011732 Vanilla planifolia HOM05D004812 ORTHO05D005721 8.9e-06 55.1 93 40.9


User provided reference genes

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