Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04599 Vaccinium macrocarpon HOM05D004527 ORTHO05D005335 2.4e-52 209.1 160 100.0
vmacro23340 Vaccinium macrocarpon HOM05D004527 ORTHO05D005335 6.0e-43 177.9 101 86.1
CSS0048095 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 3.2e-36 155.6 101 76.2
Dinv26963 Davidia involucrata HOM05D004527 ORTHO05D005335 4.2e-36 155.2 100 77.0
Actinidia36420 Actinidia chinensis HOM05D004527 ORTHO05D005335 5.4e-36 154.8 100 75.0
Actinidia11961 Actinidia chinensis HOM05D004527 ORTHO05D005335 7.1e-36 154.5 100 76.0
Rhsim10G0094600 Rhododendron simsii HOM05D004527 ORTHO05D005335 7.1e-36 154.5 96 79.2
Dinv23049 Davidia involucrata HOM05D004527 ORTHO05D005335 1.6e-35 153.3 95 76.8
Hma1.2p1_1139F.1_g260820 Hydrangea macrophylla HOM05D004527 ORTHO05D005335 3.0e-34 149.1 94 75.5
Lj4P166T18 Lonicera japonica HOM05D004527 ORTHO05D005335 3.6e-32 142.1 95 72.6
Gohir.A02G149500 Gossypium hirsutum HOM05D004527 ORTHO05D005335 8.1e-32 141.0 95 73.7
TAR381G1318 Trochodendron aralioides HOM05D004527 ORTHO05D005335 8.1e-32 141.0 94 73.4
TAR628G0079 Trochodendron aralioides HOM05D004527 ORTHO05D005335 8.1e-32 141.0 94 74.5
COL.COLO4_11620 Corchorus olitorius HOM05D004527 ORTHO05D005335 1.1e-31 140.6 95 71.6
CSS0027520 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 2.4e-31 139.4 96 70.8
CSS0031628 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 2.4e-31 139.4 96 70.8
Gohir.A12G080600 Gossypium hirsutum HOM05D004527 ORTHO05D005335 3.1e-31 139.0 95 71.6
Gohir.D12G077300 Gossypium hirsutum HOM05D004527 ORTHO05D005335 3.1e-31 139.0 95 71.6
Gorai.008G086100 Gossypium raimondii HOM05D004527 ORTHO05D005335 3.1e-31 139.0 95 71.6
Ciclev10026270m.g Citrus clementina HOM05D004527 ORTHO05D005335 4.0e-31 138.7 94 71.3
Gohir.D03G030300 Gossypium hirsutum HOM05D004527 ORTHO05D005335 4.0e-31 138.7 94 72.3
Gorai.003G032400 Gossypium raimondii HOM05D004527 ORTHO05D005335 4.0e-31 138.7 94 72.3
Duzib147G0417 Durio zibethinus HOM05D004527 ORTHO05D005335 5.3e-31 138.3 95 71.6
Thecc.01G076900 Theobroma cacao HOM05D004527 ORTHO05D005335 6.9e-31 137.9 95 69.5
CiPaw.01G001600 Carya illinoinensis HOM05D004527 ORTHO05D005335 9.0e-31 137.5 94 75.5
Duzib264G0041 Durio zibethinus HOM05D004527 ORTHO05D005335 1.2e-30 137.1 95 71.6
Gorai.007G226700 Gossypium raimondii HOM05D004527 ORTHO05D005335 1.5e-30 136.7 95 68.4
DCAR_025824 Daucus carota HOM05D004527 ORTHO05D005335 2.0e-30 136.3 94 71.3
Gohir.D11G211000 Gossypium hirsutum HOM05D004527 ORTHO05D005335 2.0e-30 136.3 95 68.4
Manes.12G117900 Manihot esculenta HOM05D004527 ORTHO05D005335 4.5e-30 135.2 101 69.3
Cpa.g.sc129.69 Carica papaya HOM05D004527 ORTHO05D005335 5.8e-30 134.8 95 70.5
PGSC0003DMG400043061 Solanum tuberosum HOM05D004527 ORTHO05D005335 5.8e-30 134.8 100 69.0
Atru.chr3.1065 Acer truncatum HOM05D004527 ORTHO05D005335 7.6e-30 134.4 96 70.8
Duzib187G1832 Durio zibethinus HOM05D004527 ORTHO05D005335 9.9e-30 134.0 95 68.4
Nn5g30677 Nelumbo nucifera HOM05D004527 ORTHO05D005335 9.9e-30 134.0 100 66.0
CANSAT25G2808 Cannabis sativa HOM05D004527 ORTHO05D005335 1.3e-29 133.7 97 66.0
MD15G1301200 Malus domestica HOM05D004527 ORTHO05D005335 1.3e-29 133.7 96 66.7
Nn6g34534 Nelumbo nucifera HOM05D004527 ORTHO05D005335 1.3e-29 133.7 91 71.4
Lj7C113T0 Lonicera japonica HOM05D004527 ORTHO05D005335 1.7e-29 133.3 94 68.1
Cc07_g07400 Coffea canephora HOM05D004527 ORTHO05D005335 2.2e-29 132.9 94 69.1
Nitab4.5_0000142g0410 Nicotiana tabacum HOM05D004527 ORTHO05D005335 3.8e-29 132.1 100 69.0
Nitab4.5_0000776g0070 Nicotiana tabacum HOM05D004527 ORTHO05D005335 3.8e-29 132.1 100 69.0
RcHm_v2.0_Chr2g0108871 Rosa chinensis HOM05D004527 ORTHO05D005335 4.9e-29 131.7 95 67.4
TAR625G0245 Trochodendron aralioides HOM05D004527 ORTHO05D005335 4.9e-29 131.7 94 71.3
FvH4_1g18280 Fragaria vesca HOM05D004527 ORTHO05D005335 8.4e-29 131.0 93 69.9
FAN19G0418 Fragaria x ananassa HOM05D004527 ORTHO05D005335 8.4e-29 131.0 93 69.9
FAN28G1986 Fragaria x ananassa HOM05D004527 ORTHO05D005335 8.4e-29 131.0 93 69.9
QL06p038806 Quercus lobata HOM05D004527 ORTHO05D005335 8.4e-29 131.0 100 67.0
FAN23G2001 Fragaria x ananassa HOM05D004527 ORTHO05D005335 1.1e-28 130.6 81 75.3
Oeu034346.1 Olea europaea HOM05D004527 ORTHO05D005335 1.1e-28 130.6 101 65.3
FAN26G2218 Fragaria x ananassa HOM05D004527 ORTHO05D005335 1.9e-28 129.8 93 68.8
MD02G1190100 Malus domestica HOM05D004527 ORTHO05D005335 1.9e-28 129.8 96 64.6
Lsat_1_v5_gn_4_158441 Lactuca sativa HOM05D004527 ORTHO05D005335 2.4e-28 129.4 97 64.9
THA.LOC104827740 Tarenaya hassleriana HOM05D004527 ORTHO05D005335 2.4e-28 129.4 97 66.0
Solyc02g092040.1 Solanum lycopersicum HOM05D004527 ORTHO05D005335 3.2e-28 129.0 100 66.0
Sopen02g036620 Solanum pennellii HOM05D004527 ORTHO05D005335 3.2e-28 129.0 100 66.0
Oeu013345.1 Olea europaea HOM05D004527 ORTHO05D005335 4.2e-28 128.6 101 63.4
Manes.13G108600 Manihot esculenta HOM05D004527 ORTHO05D005335 5.4e-28 128.3 93 67.7
CAN.G1343.10 Capsicum annuum HOM05D004527 ORTHO05D005335 7.1e-28 127.9 101 67.3
TWI74G0505 Tripterygium wilfordii HOM05D004527 ORTHO05D005335 7.1e-28 127.9 101 67.3
Sabra14G0006900 Salix brachista HOM05D004527 ORTHO05D005335 1.6e-27 126.7 95 67.4
Thhalv10005320m.g Eutrema salsugineum HOM05D004527 ORTHO05D005335 2.1e-27 126.3 97 68.0
GSVIVG01007390001 Vitis vinifera HOM05D004527 ORTHO05D005335 2.1e-27 126.3 77 77.9
Aqoxy6G02924 Aquilegia oxysepala HOM05D004527 ORTHO05D005335 2.7e-27 125.9 93 64.5
Prupe.6G216300 Prunus persica HOM05D004527 ORTHO05D005335 2.7e-27 125.9 94 64.9
BcaC04g23245 Brassica carinata HOM05D004527 ORTHO05D005335 3.5e-27 125.6 97 66.0
A09p09200 Brassica napus HOM05D004527 ORTHO05D005335 3.5e-27 125.6 97 64.9
BolC9t53969H Brassica oleracea HOM05D004527 ORTHO05D005335 3.5e-27 125.6 97 66.0
BraA09t36572Z Brassica rapa HOM05D004527 ORTHO05D005335 3.5e-27 125.6 97 64.9
Lsat_1_v5_gn_3_85800 Lactuca sativa HOM05D004527 ORTHO05D005335 3.5e-27 125.6 99 65.7
CARHR279830 Cardamine hirsuta HOM05D004527 ORTHO05D005335 4.6e-27 125.2 96 67.7
Potri.014G012300 Populus trichocarpa HOM05D004527 ORTHO05D005335 7.9e-27 124.4 95 67.4
Sp5g12330 Schrenkiella parvula HOM05D004527 ORTHO05D005335 7.9e-27 124.4 97 66.0
C09p10730 Brassica napus HOM05D004527 ORTHO05D005335 1.0e-26 124.0 97 64.9
CARHR158830 Cardamine hirsuta HOM05D004527 ORTHO05D005335 1.3e-26 123.6 97 64.9
Migut.H00322 Erythranthe guttata HOM05D004527 ORTHO05D005335 1.3e-26 123.6 101 61.4
Migut.L00429 Erythranthe guttata HOM05D004527 ORTHO05D005335 1.3e-26 123.6 81 72.8
PSO170G0158 Papaver somniferum HOM05D004527 ORTHO05D005335 1.3e-26 123.6 97 61.9
SalBow3G2616 Salvia bowleyana HOM05D004527 ORTHO05D005335 1.3e-26 123.6 80 73.8
Sabra07G0005800 Salix brachista HOM05D004527 ORTHO05D005335 1.8e-26 123.2 95 64.2
SGA_v2.0_scaffold269G46278 Striga asiatica HOM05D004527 ORTHO05D005335 1.8e-26 123.2 94 67.0
Carub.0005s1611 Capsella rubella HOM05D004527 ORTHO05D005335 3.0e-26 122.5 98 63.3
Sp2g28920 Schrenkiella parvula HOM05D004527 ORTHO05D005335 3.0e-26 122.5 97 66.0
Aa31LG4G18240 Aethionema arabicum HOM05D004527 ORTHO05D005335 3.9e-26 122.1 98 63.3
A01p24580 Brassica napus HOM05D004527 ORTHO05D005335 3.9e-26 122.1 100 64.0
BraA01t02368Z Brassica rapa HOM05D004527 ORTHO05D005335 3.9e-26 122.1 100 64.0
C08p24770 Brassica napus HOM05D004527 ORTHO05D005335 5.1e-26 121.7 96 62.5
Carub.0008s2672 Capsella rubella HOM05D004527 ORTHO05D005335 5.1e-26 121.7 97 66.0
AT3G49750 Arabidopsis thaliana HOM05D004527 ORTHO05D005335 6.7e-26 121.3 95 64.2
PSO017G0995 Papaver somniferum HOM05D004527 ORTHO05D005335 6.7e-26 121.3 102 60.8
HanXRQChr14g0447741 Helianthus annuus HOM05D004527 ORTHO05D005335 8.7e-26 120.9 102 60.8
Potri.007G007500 Populus trichocarpa HOM05D004527 ORTHO05D005335 8.7e-26 120.9 101 62.4
Aa31LG1G16250 Aethionema arabicum HOM05D004527 ORTHO05D005335 1.1e-25 120.6 97 64.9
BcaC09g49968 Brassica carinata HOM05D004527 ORTHO05D005335 1.1e-25 120.6 100 63.0
BolC1t03001H Brassica oleracea HOM05D004527 ORTHO05D005335 1.1e-25 120.6 100 63.0
AL5G29710 Arabidopsis lyrata HOM05D004527 ORTHO05D005335 1.5e-25 120.2 97 63.9
AT5G65830 Arabidopsis thaliana HOM05D004527 ORTHO05D005335 1.5e-25 120.2 96 64.6
C01p30660 Brassica napus HOM05D004527 ORTHO05D005335 1.5e-25 120.2 100 63.0
ClCG01G017820 Citrullus lanatus HOM05D004527 ORTHO05D005335 1.9e-25 119.8 94 59.6
Thhalv10010947m.g Eutrema salsugineum HOM05D004527 ORTHO05D005335 1.9e-25 119.8 97 61.9
BcaB04g20032 Brassica carinata HOM05D004527 ORTHO05D005335 2.5e-25 119.4 97 60.8
BcaC07g39438 Brassica carinata HOM05D004527 ORTHO05D005335 2.5e-25 119.4 96 62.5
BolC8t50091H Brassica oleracea HOM05D004527 ORTHO05D005335 2.5e-25 119.4 96 62.5
Ca_24669_v3 Cicer arietinum L. HOM05D004527 ORTHO05D005335 3.3e-25 119.0 95 58.9
BcaB01g00676 Brassica carinata HOM05D004527 ORTHO05D005335 4.3e-25 118.6 95 65.3
BcaB05g23149 Brassica carinata HOM05D004527 ORTHO05D005335 4.3e-25 118.6 97 63.9
MELO3C007658.2 Cucumis melo HOM05D004527 ORTHO05D005335 9.6e-25 117.5 95 60.0
CsaV3_6G044360 Cucumis sativus L. HOM05D004527 ORTHO05D005335 9.6e-25 117.5 95 60.0
PGR004G2554 Punica granatum HOM05D004527 ORTHO05D005335 1.3e-24 117.1 95 64.2
Sed0004587 Sechium edule HOM05D004527 ORTHO05D005335 1.6e-24 116.7 105 56.2
Psat0s1639g0080 Pisum sativum HOM05D004527 ORTHO05D005335 2.1e-24 116.3 95 60.0
MSTRG.2802 Avicennia marina HOM05D004527 ORTHO05D005335 2.8e-24 115.9 100 61.0
BcaC04g23244 Brassica carinata HOM05D004527 ORTHO05D005335 2.8e-24 115.9 97 60.8
Glyma.01G196000 Glycine max HOM05D004527 ORTHO05D005335 3.7e-24 115.5 92 58.7
MSTRG.15342 Avicennia marina HOM05D004527 ORTHO05D005335 1.1e-23 114.0 100 59.0
HanXRQChr11g0323561 Helianthus annuus HOM05D004527 ORTHO05D005335 1.1e-23 114.0 97 58.8
Peaxi162Scf00096g00187 Petunia axillaris HOM05D004527 ORTHO05D005335 1.1e-23 114.0 71 76.1
HPP92_020623 Vanilla planifolia HOM05D004527 ORTHO05D005335 3.1e-23 112.5 95 60.0
MSTRG.23652 Avicennia marina HOM05D004527 ORTHO05D005335 6.9e-23 111.3 100 59.0
HanXRQChr04g0112451 Helianthus annuus HOM05D004527 ORTHO05D005335 9.0e-23 110.9 95 58.9
Glyma.11G045700 Glycine max HOM05D004527 ORTHO05D005335 2.0e-22 109.8 87 60.9
Lalb_Chr16g0379001 Lupinus albus HOM05D004527 ORTHO05D005335 2.0e-22 109.8 92 57.6
Sc03g0002680 Simmondsia chinensis HOM05D004527 ORTHO05D005335 3.4e-22 109.0 100 56.0
TPR.G9333 Trifolium pratense HOM05D004527 ORTHO05D005335 3.4e-22 109.0 99 55.6
MSTRG.3484 Avicennia marina HOM05D004527 ORTHO05D005335 4.5e-22 108.6 77 66.2
Sc03g0002710 Simmondsia chinensis HOM05D004527 ORTHO05D005335 5.8e-22 108.2 78 65.4
Eucgr.I00670 Eucalyptus grandis HOM05D004527 ORTHO05D005335 1.7e-21 106.7 95 58.9
CDE01G0566 Ceratophyllum demersum HOM05D004527 ORTHO05D005335 2.9e-21 105.9 84 58.3
VMungo1215G0719 Vigna mungo HOM05D004527 ORTHO05D005335 4.9e-21 105.1 92 56.5
SHI12014 Sapria himalayana HOM05D000105 ORTHO05D000023 6.4e-21 104.8 89 56.2
Medtr5g015050 Medicago truncatula HOM05D004527 ORTHO05D005335 8.4e-21 104.4 97 51.5
Phvul.002G009000 Phaseolus vulgaris HOM05D004527 ORTHO05D005335 1.4e-20 103.6 92 57.6
EL10Ac6g15591 Beta vulgaris HOM05D004527 ORTHO05D005335 1.2e-19 100.5 94 55.3
MBI16_g04107_MAGBIO Magnolia biondii HOM05D004527 ORTHO05D005335 1.6e-19 100.1 86 60.5
MBI16_g37622_MAGBIO Magnolia biondii HOM05D004527 ORTHO05D005335 1.6e-19 100.1 86 60.5
Gohir.A11G211900 Gossypium hirsutum HOM05D004527 ORTHO05D005335 2.1e-19 99.8 103 51.5
TWI77G0125 Tripterygium wilfordii HOM05D004527 ORTHO05D005335 2.7e-19 99.4 57 82.5
AUR62007543 Chenopodium quinoa HOM05D004527 ORTHO05D005335 7.9e-19 97.8 81 58.0
arahy.Tifrunner.gnm1.ann1.1FYE2A Arachis hypogaea HOM05D004527 ORTHO05D005335 1.3e-18 97.1 78 57.7
arahy.Tifrunner.gnm1.ann1.SGKS0T Arachis hypogaea HOM05D004527 ORTHO05D005335 1.3e-18 97.1 78 57.7
Zm00001eb257530 Zea mays HOM05D004527 ORTHO05D005335 5.1e-18 95.1 83 57.8
Lj2g0022505 Lotus japonicus HOM05D004527 ORTHO05D005335 6.7e-18 94.7 94 55.3
Lsat_1_v5_gn_2_80060 Lactuca sativa HOM05D004527 ORTHO05D005335 1.9e-17 93.2 61 72.1
Zm00001eb192660 Zea mays HOM05D004527 ORTHO05D005335 1.9e-17 93.2 80 58.8
ATR0739G175 Amborella trichopoda HOM05D004527 ORTHO05D005335 4.3e-17 92.0 95 48.4
Os09g0131200 Oryza sativa ssp. japonica HOM05D004527 ORTHO05D005335 2.1e-16 89.7 78 57.7
SEGI_31883 Sequoiadendron giganteum HOM05D004527 ORTHO05D005335 4.8e-16 88.6 102 44.1
CiPaw.13G061200 Carya illinoinensis HOM05D000166 ORTHO05D001348 7.7e-06 54.7 92 35.9


User provided reference genes

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