Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 8.7e-116 420.2 200 100.0
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 8.5e-71 270.8 134 98.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 4.1e-65 251.9 134 90.3
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.8e-58 229.2 120 91.7
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.1e-57 227.3 134 79.1
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.4e-57 226.9 122 89.3
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.1e-57 225.7 131 80.2
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.1e-57 225.3 134 79.1
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 4.1e-57 225.3 129 84.5
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 7.0e-57 224.6 131 80.9
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 7.0e-57 224.6 131 80.9
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 7.0e-57 224.6 131 80.9
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 7.7e-56 221.1 131 79.4
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.0e-55 220.7 133 77.4
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.0e-55 220.7 131 81.7
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.3e-55 220.3 131 80.2
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.3e-55 220.3 131 80.9
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.7e-55 219.9 132 78.0
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.8e-55 218.8 137 78.1
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 5.0e-55 218.4 132 78.0
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 5.0e-55 218.4 131 76.3
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 6.5e-55 218.0 135 77.8
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.1e-54 217.2 133 78.9
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.5e-54 216.9 131 77.9
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.9e-54 216.5 131 76.3
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 4.2e-54 215.3 131 77.1
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.5e-54 214.9 131 77.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 7.2e-54 214.5 137 76.6
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 7.2e-54 214.5 128 78.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.2e-53 213.8 131 74.8
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.2e-53 213.8 131 75.6
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.6e-53 213.4 131 77.9
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.6e-53 213.4 131 74.0
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.7e-53 212.6 128 79.7
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 3.6e-53 212.2 129 79.1
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 6.1e-53 211.5 130 74.6
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 6.1e-53 211.5 132 78.0
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.0e-52 210.7 132 75.0
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.4e-52 210.3 131 77.1
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.4e-52 210.3 131 73.3
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.4e-52 210.3 132 72.0
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.4e-52 210.3 131 72.5
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.8e-52 209.9 131 74.8
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.8e-52 209.9 132 75.0
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.3e-52 209.5 131 74.8
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.2e-52 208.4 131 76.3
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 2.0e-51 206.5 131 77.1
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.0e-51 206.5 132 75.8
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.0e-51 206.5 132 75.8
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.0e-51 206.5 128 73.4
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 2.0e-51 206.5 131 77.1
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.6e-51 206.1 131 74.0
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.6e-51 206.1 131 77.9
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 3.4e-51 205.7 132 72.0
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 3.4e-51 205.7 131 74.0
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 3.4e-51 205.7 131 74.0
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 4.4e-51 205.3 133 72.9
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 7.5e-51 204.5 134 75.4
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 9.8e-51 204.1 134 74.6
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 2.8e-50 202.6 131 76.3
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 6.3e-50 201.4 131 76.3
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 8.3e-50 201.1 131 74.0
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 8.3e-50 201.1 134 75.4
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.4e-49 200.3 138 68.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.4e-49 200.3 138 68.8
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.4e-49 199.5 133 73.7
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 4.1e-49 198.7 130 70.0
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 7.0e-49 198.0 133 73.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 7.0e-49 198.0 164 62.8
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 9.1e-49 197.6 128 69.5
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.6e-48 196.8 133 73.7
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.0e-48 196.4 133 73.7
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 3.5e-48 195.7 137 70.1
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 3.5e-48 195.7 133 71.4
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 4.5e-48 195.3 131 68.7
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 7.7e-48 194.5 133 72.9
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.7e-47 193.4 131 72.5
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.8e-47 192.2 128 70.3
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 3.3e-46 189.1 119 73.9
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 5.5e-46 188.3 131 67.9
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.2e-45 187.2 119 73.1
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 2.8e-45 186.0 129 67.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 2.8e-45 186.0 129 67.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 3.6e-45 185.7 131 66.4
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 4.7e-45 185.3 131 66.4
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 8.0e-45 184.5 129 66.7
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.0e-44 184.1 132 67.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.0e-44 184.1 101 84.2
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 4.0e-44 182.2 135 63.0
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 5.2e-44 181.8 135 63.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 5.2e-44 181.8 131 67.2
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.8e-44 181.4 111 76.6
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 8.9e-44 181.0 129 65.1
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.0e-43 179.9 129 66.7
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.6e-43 179.5 131 66.4
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 4.4e-43 178.7 133 64.7
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 4.4e-43 178.7 132 65.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 4.4e-43 178.7 133 65.4
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 7.5e-43 177.9 132 65.2
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.3e-42 177.2 128 66.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.8e-42 176.0 131 64.9
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.8e-42 176.0 124 71.8
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 4.9e-42 175.3 133 65.4
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 6.3e-42 174.9 132 64.4
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 2.4e-41 172.9 132 64.4
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 9.2e-41 171.0 132 62.9
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 9.2e-41 171.0 135 61.5
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 2.0e-40 169.9 116 66.4
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.7e-40 169.5 103 78.6
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.9e-40 168.3 131 63.4
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.0e-39 167.5 125 66.4
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.9e-39 166.0 127 63.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 5.0e-39 165.2 131 62.6
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 3.3e-38 162.5 103 75.7
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 5.8e-35 151.8 133 51.1
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 2.2e-34 149.8 129 55.0
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.9e-34 149.4 120 55.8
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 4.9e-34 148.7 116 56.9
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.1e-33 147.5 98 71.4
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.4e-33 147.1 131 53.4
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 4.1e-33 145.6 92 73.9
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 7.0e-33 144.8 126 53.2
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 9.2e-33 144.4 110 63.6
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.6e-32 142.1 87 73.6
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.9e-30 136.7 86 72.1
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 7.3e-30 134.8 101 60.4
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.9e-25 120.2 80 68.8
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 9.2e-25 117.9 119 46.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.0e-23 114.4 89 64.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.9e-19 97.8 73 67.1
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 7.3e-14 81.6 87 51.7
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 2.3e-07 60.1 43 62.8


User provided reference genes

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