Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 4.2e-160 568.2 328 100.0
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 3.6e-151 538.5 328 92.4
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.7e-140 503.1 328 88.4
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 2.0e-138 496.1 328 86.6
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 7.7e-138 494.2 325 88.0
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 4.3e-136 488.4 324 86.4
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 5.6e-136 488.0 328 85.4
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 9.5e-136 487.3 328 85.7
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 4.7e-135 485.0 327 70.9
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 8.0e-135 484.2 328 86.0
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 4.0e-134 481.9 326 85.3
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 1.2e-133 480.3 328 84.8
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.2e-133 480.3 322 71.1
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.5e-133 479.9 328 85.1
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.5e-133 479.9 326 72.1
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 5.7e-133 478.0 326 84.4
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 5.7e-133 478.0 328 83.2
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.2e-132 476.1 322 82.6
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.2e-132 476.1 328 73.5
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 3.7e-132 475.3 322 85.7
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 4.9e-132 474.9 322 70.2
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 6.4e-132 474.6 326 84.4
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 6.4e-132 474.6 326 74.2
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 8.3e-132 474.2 325 84.6
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 1.1e-131 473.8 328 83.2
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.1e-131 473.8 328 81.7
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 2.4e-131 472.6 323 85.1
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.4e-131 472.6 328 71.6
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 3.2e-131 472.2 328 83.5
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.1e-131 471.9 328 68.9
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 5.4e-131 471.5 325 68.6
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 7.0e-131 471.1 322 69.9
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 7.0e-131 471.1 322 84.8
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.2e-130 470.3 326 83.7
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.0e-130 469.5 328 84.1
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.7e-130 469.2 328 69.5
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.7e-130 469.2 322 69.3
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 4.6e-130 468.4 322 81.4
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 4.6e-130 468.4 326 83.7
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 4.6e-130 468.4 322 84.8
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 5.9e-130 468.0 322 83.9
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.7e-129 466.5 322 83.9
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.3e-129 466.1 328 83.2
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.3e-129 466.1 328 82.3
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 3.9e-129 465.3 321 83.5
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 5.0e-129 464.9 325 71.4
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 8.6e-129 464.2 328 75.3
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 8.6e-129 464.2 319 68.7
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.1e-128 463.8 328 81.1
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.5e-128 463.4 328 84.5
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.5e-128 463.4 328 81.7
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.9e-128 463.0 323 69.7
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 3.3e-128 462.2 328 68.0
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 4.3e-128 461.8 323 69.0
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 5.6e-128 461.5 322 83.2
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 7.3e-128 461.1 328 67.4
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 9.5e-128 460.7 328 83.8
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 1.2e-127 460.3 322 68.0
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 3.6e-127 458.8 322 82.6
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 3.6e-127 458.8 328 80.8
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 6.8e-126 454.5 325 82.5
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 8.9e-126 454.1 322 67.7
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.2e-125 453.8 237 87.8
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 2.0e-125 453.0 322 68.0
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 4.4e-125 451.8 328 80.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.7e-124 449.9 322 66.8
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.7e-124 448.7 325 74.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 4.9e-124 448.4 320 65.9
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.4e-123 446.8 325 80.6
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 2.4e-123 446.0 325 80.3
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.1e-123 445.3 325 80.3
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 4.1e-123 445.3 237 85.7
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.7e-121 439.9 236 85.2
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 5.0e-121 438.3 322 78.9
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.1e-120 437.2 323 72.8
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 7.3e-120 434.5 324 64.8
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.1e-119 433.0 325 78.8
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 2.1e-119 433.0 326 78.2
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 3.6e-119 432.2 366 69.4
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 4.7e-119 431.8 326 68.7
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.1e-118 430.6 237 84.0
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.8e-118 429.9 329 76.6
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 4.0e-118 428.7 326 62.6
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.2e-117 427.2 326 62.3
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.5e-117 426.8 326 62.3
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.6e-117 426.0 326 62.6
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 9.8e-117 424.1 326 61.7
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 3.7e-116 422.2 328 76.2
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 6.4e-116 421.4 323 63.5
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 3.5e-114 415.6 324 62.7
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 5.1e-113 411.8 320 61.9
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 3.6e-111 405.6 317 76.3
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 3.2e-107 392.5 328 74.4
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 7.1e-107 391.3 235 74.5
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 2.1e-106 389.8 311 75.6
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.0e-106 388.3 334 59.9
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.1e-99 367.5 325 54.5
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 3.5e-98 362.5 320 70.3
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 5.1e-97 358.6 321 69.8
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 8.1e-95 351.3 260 65.8
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 9.0e-94 347.8 279 80.3
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 4.9e-92 342.0 263 81.4
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 3.5e-90 335.9 262 78.6
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.7e-84 317.0 247 64.0
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 1.2e-82 310.8 251 80.9
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 5.5e-75 285.4 247 76.5
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 4.3e-72 275.8 381 38.6
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.8e-65 253.8 243 70.0
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.6e-63 247.3 228 54.4
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 2.4e-62 243.4 328 46.0
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.0e-60 238.0 138 79.7
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.9e-60 236.5 191 61.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.2e-58 231.1 189 57.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 3.4e-53 213.0 126 77.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.9e-49 199.5 124 72.6
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.5e-43 181.0 94 87.2
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 7.3e-19 99.0 87 63.2
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 1.5e-16 91.3 85 49.4
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.3e-07 61.6 42 61.9
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 2.2e-07 60.8 93 41.9
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-06 57.4 61 49.2
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 4.1e-06 56.6 36 66.7


User provided reference genes

Program Settings