Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.0e-190 668.3 327 100.0
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.5e-178 627.9 327 93.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.3e-158 562.4 325 84.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.1e-155 553.5 323 83.3
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 3.6e-151 538.5 325 80.3
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.0e-150 535.4 317 83.0
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 9.7e-149 530.4 323 81.1
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.2e-148 529.3 323 79.9
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 5.0e-145 518.1 324 77.8
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.2e-144 515.0 323 78.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.2e-144 515.0 323 77.7
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 4.0e-142 508.4 324 74.7
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.6e-141 505.8 332 73.8
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 7.5e-141 504.2 325 75.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.7e-140 503.1 326 74.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.7e-140 503.1 325 73.8
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 2.8e-140 502.3 325 73.8
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.1e-139 500.4 325 73.8
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 2.4e-139 499.2 321 75.1
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.4e-139 499.2 325 73.2
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.1e-139 498.4 320 74.7
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 5.3e-139 498.0 324 73.5
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.6e-138 496.5 324 73.1
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 3.5e-138 495.4 332 72.9
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.5e-138 495.0 324 72.5
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.7e-137 493.0 324 72.5
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 3.2e-136 488.8 319 73.0
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.1e-135 486.1 323 72.4
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.0e-135 484.2 323 73.7
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.8e-134 483.0 325 70.8
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 3.0e-134 482.3 323 71.5
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 6.8e-134 481.1 325 70.5
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 8.8e-134 480.7 323 72.4
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 8.8e-134 480.7 323 72.4
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.5e-133 479.9 322 71.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 2.0e-133 479.6 322 70.2
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 2.6e-133 479.2 319 73.4
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 7.5e-133 477.6 325 71.1
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.3e-132 476.9 325 70.5
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.3e-132 476.9 325 69.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.8e-132 475.7 325 69.8
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 3.7e-132 475.3 324 70.4
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.7e-132 475.3 325 69.8
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 4.8e-132 474.9 325 69.5
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.8e-132 474.9 323 72.4
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 8.3e-132 474.2 317 72.6
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.1e-131 473.8 317 72.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.4e-131 473.4 323 70.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.8e-131 473.0 314 72.6
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.4e-131 472.6 325 69.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.4e-131 472.6 325 70.5
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.7e-130 469.2 325 69.5
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 7.7e-130 467.6 320 70.3
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.0e-129 467.2 321 69.8
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.3e-129 466.8 324 69.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.8e-129 465.3 324 69.4
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.9e-128 463.0 325 67.1
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 5.5e-128 461.5 319 70.5
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 5.5e-128 461.5 321 69.2
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 7.2e-128 461.1 318 70.1
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 9.5e-128 460.7 321 68.8
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 9.5e-128 460.7 326 67.8
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 3.6e-127 458.8 319 69.6
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.6e-127 458.8 297 73.4
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.0e-126 455.7 323 69.3
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 3.7e-124 448.7 324 66.4
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 6.3e-124 448.0 328 66.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.1e-123 447.2 325 65.5
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 4.1e-123 445.3 323 66.9
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.1e-123 445.3 323 66.9
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.1e-123 445.3 323 66.9
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 9.2e-123 444.1 323 66.6
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.0e-122 443.0 324 66.0
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 2.7e-122 442.6 319 65.8
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.5e-122 442.2 324 66.4
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 4.5e-122 441.8 323 66.3
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 4.5e-122 441.8 323 66.3
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.0e-121 440.7 328 65.2
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 8.6e-121 437.6 317 67.2
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 8.6e-121 437.6 319 66.8
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.3e-120 435.6 319 65.5
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 6.1e-119 431.4 318 65.1
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.8e-118 429.9 325 66.2
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 6.8e-118 427.9 317 68.8
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 4.6e-114 415.2 328 61.9
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.0e-113 411.8 316 64.2
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.6e-113 411.4 321 64.8
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.5e-109 400.2 317 60.3
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 2.2e-108 396.4 323 61.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 3.1e-102 375.9 305 61.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 4.9e-100 368.6 310 58.7
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.4e-94 350.5 326 55.8
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.2e-92 343.2 203 79.8
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.3e-89 334.0 289 58.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.9e-85 317.8 203 74.9
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.6e-82 308.9 309 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.3e-79 300.8 306 49.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.1e-79 300.1 305 51.1
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.5e-77 292.4 157 89.2
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.3e-73 280.8 240 59.6
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.5e-72 276.6 199 67.3
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 4.9e-68 262.3 203 63.5
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 6.5e-68 261.9 177 68.9
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.0e-62 241.5 130 84.6
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.4e-61 239.6 163 68.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.2e-60 236.9 158 74.7
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.3e-52 211.1 243 50.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.2e-52 210.3 285 44.2
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.5e-43 180.3 135 65.2
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.6e-42 176.4 122 68.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.0e-40 170.6 139 61.9
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.8e-39 166.8 86 84.9
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.5e-27 125.9 76 73.7
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.7e-26 122.9 118 55.9
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-21 108.2 72 72.2
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 4.0e-17 93.2 161 39.8
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 9.8e-16 88.6 71 62.0
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 4.2e-11 73.2 155 32.9
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 6.4e-07 59.3 170 27.1
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.4e-06 58.2 150 29.3


User provided reference genes

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