Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 0.0e+00 1642.1 902 100.0
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 1.2e-294 1016.5 983 64.0
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.6e-217 760.4 924 56.2
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 2.8e-198 696.4 906 51.9
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.0e-192 677.9 919 52.4
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 2.4e-165 587.0 907 48.3
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 1.2e-151 541.6 930 45.8
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.4e-149 534.6 929 45.2
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 8.1e-145 518.8 925 43.4
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 2.7e-140 503.8 714 49.3
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 6.6e-139 499.2 915 45.1
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 3.3e-138 496.9 918 42.2
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 4.4e-135 486.5 926 41.3
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 8.4e-134 482.3 686 48.1
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 2.1e-129 467.6 941 41.2
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 6.2e-129 466.1 916 41.0
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 6.4e-126 456.1 912 41.9
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 2.3e-123 447.6 915 41.0
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 8.1e-121 439.1 916 39.8
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.1e-120 438.7 880 42.0
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 5.3e-120 436.4 756 42.7
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 3.4e-119 433.7 768 44.5
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 2.2e-118 431.0 747 43.0
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 4.9e-118 429.9 711 44.4
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 6.4e-118 429.5 911 39.5
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 6.4e-118 429.5 811 42.0
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 8.4e-118 429.1 742 43.9
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 5.5e-117 426.4 754 44.6
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 7.1e-117 426.0 750 42.8
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 2.7e-116 424.1 903 39.1
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 3.5e-116 423.7 775 42.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 3.0e-115 420.6 676 45.3
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 9.6e-114 415.6 706 44.8
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.8e-112 411.4 737 42.6
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 6.9e-112 409.5 661 46.3
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 6.9e-112 409.5 913 39.0
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 1.7e-110 404.8 706 42.2
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 4.9e-110 403.3 904 38.3
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 8.4e-110 402.5 751 43.8
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.4e-109 401.7 910 38.5
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.5e-109 401.0 761 43.0
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 2.5e-109 401.0 905 38.8
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.2e-109 400.6 676 42.8
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 3.2e-109 400.6 749 43.0
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 5.5e-109 399.8 752 43.6
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 3.0e-107 394.0 708 42.4
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 5.1e-107 393.3 762 41.3
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 6.7e-107 392.9 796 41.5
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 1.9e-106 391.3 706 40.1
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 5.7e-106 389.8 935 39.1
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 5.7e-106 389.8 708 41.7
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 4.8e-105 386.7 956 38.0
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 6.3e-105 386.3 924 39.0
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.4e-104 384.4 954 37.7
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.6e-103 380.9 948 38.5
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 5.9e-103 379.8 932 38.8
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 7.6e-103 379.4 742 42.3
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 4.2e-101 373.6 719 39.8
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.0e-99 369.0 920 37.6
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.0e-99 369.0 934 37.7
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 1.0e-99 369.0 899 39.8
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 1.5e-98 365.2 928 37.9
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 3.7e-97 360.5 713 40.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 4.8e-97 360.1 602 44.2
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 6.3e-97 359.8 897 38.9
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 1.4e-96 358.6 707 41.7
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 1.8e-96 358.2 670 42.2
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 8.5e-94 349.4 714 40.2
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 4.2e-93 347.1 700 42.1
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 6.9e-88 329.7 926 37.3
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 4.5e-87 327.0 595 43.4
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 4.5e-87 327.0 595 43.4
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 2.9e-86 324.3 751 39.5
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 4.2e-85 320.5 921 37.0
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 1.2e-84 318.9 664 38.7
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 2.2e-81 308.1 329 61.4
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 1.7e-78 298.5 701 36.9
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.1e-77 295.8 626 38.8
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 2.3e-75 288.1 700 36.6
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.3e-70 272.3 865 34.9
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.2e-68 265.8 701 33.7
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 4.0e-67 260.8 759 34.4
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 5.7e-66 256.9 672 36.0
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 7.0e-64 250.0 679 35.8
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 2.0e-63 248.4 681 33.9
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 2.7e-63 248.1 679 34.5
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 7.7e-63 246.5 675 35.1
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 1.7e-62 245.4 591 38.1
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 3.8e-62 244.2 678 34.7
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 1.9e-61 241.9 681 35.4
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 2.1e-60 238.4 678 36.0
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 3.6e-60 237.7 824 32.6
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.8e-59 235.3 709 34.8
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 3.0e-59 234.6 681 35.5
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 3.0e-59 234.6 681 35.5
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 3.4e-58 231.1 813 33.3
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.8e-56 225.3 841 31.6
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.7e-54 218.8 824 30.8
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 6.4e-49 200.3 714 31.1
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.6e-47 195.7 775 31.7
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 4.3e-45 187.6 678 31.1
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.6e-44 185.7 748 30.3
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.8e-44 184.9 501 32.7
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 3.2e-40 171.4 352 43.2
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 3.0e-38 164.9 619 34.1
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 3.6e-36 157.9 201 47.3
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 4.4e-34 151.0 392 37.0
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 2.7e-31 141.7 647 28.6
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 6.6e-30 137.1 150 58.0
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 2.4e-27 128.6 673 27.8
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 2.4e-19 102.1 788 27.4
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.5e-18 99.4 142 44.4
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 9.9e-18 96.7 861 26.2
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 9.9e-18 96.7 861 26.2
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 2.5e-13 82.0 233 37.3
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 1.3e-09 69.7 163 38.0
Oeu016743.1 Olea europaea HOM05D002134 ORTHO05D008658 8.7e-06 57.0 336 25.3


User provided reference genes

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