Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 0.0e+00 1284.2 679 100.0
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 2.8e-291 1005.0 687 77.1
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 3.2e-239 832.0 667 67.0
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 6.3e-227 791.2 696 62.8
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 6.1e-222 774.6 610 66.2
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 8.0e-222 774.2 610 66.4
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 2.6e-220 769.2 689 61.2
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 2.2e-219 766.1 689 61.0
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 7.8e-217 757.7 680 61.3
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 8.6e-216 754.2 690 60.3
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 9.5e-215 750.7 681 60.1
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 2.3e-213 746.1 612 63.7
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 3.1e-213 745.7 611 64.3
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 3.1e-213 745.7 610 64.8
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 4.0e-213 745.3 615 63.1
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.2e-212 743.8 607 65.2
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 7.5e-212 741.1 684 58.2
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 2.9e-211 739.2 607 63.9
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 5.4e-210 734.9 588 65.6
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 2.1e-209 733.0 691 57.5
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 2.1e-209 733.0 608 63.5
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 2.7e-209 732.6 693 58.6
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 1.0e-208 730.7 605 63.5
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 1.7e-208 729.9 586 65.9
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 1.7e-208 729.9 685 59.7
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 2.3e-208 729.6 688 58.0
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 3.0e-208 729.2 594 63.8
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 5.1e-208 728.4 682 59.4
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 1.1e-207 727.2 684 58.9
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.6e-206 723.4 600 63.2
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 1.6e-206 723.4 598 62.2
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 2.8e-206 722.6 623 62.9
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 3.6e-206 722.2 609 62.2
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 1.1e-205 720.7 602 64.0
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 1.1e-205 720.7 678 59.1
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 6.8e-205 718.0 692 57.4
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 1.2e-204 717.2 607 63.4
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 2.0e-204 716.5 683 56.8
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.4e-204 715.3 685 57.1
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.4e-204 715.3 685 57.1
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 4.4e-204 715.3 606 62.5
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 2.9e-203 712.6 607 61.4
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 4.9e-203 711.8 664 59.6
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 6.4e-203 711.4 598 63.9
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 2.4e-202 709.5 602 63.1
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 7.1e-202 708.0 602 63.0
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 7.1e-202 708.0 605 62.1
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 7.1e-202 708.0 610 62.3
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 9.2e-202 707.6 606 62.9
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 9.2e-202 707.6 681 57.6
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 9.2e-202 707.6 688 58.4
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 1.2e-201 707.2 598 61.7
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 1.2e-201 707.2 678 58.8
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 1.6e-201 706.8 605 61.3
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.5e-201 705.7 664 59.2
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 4.6e-201 705.3 595 62.9
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 4.6e-201 705.3 603 62.7
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 1.7e-200 703.4 611 61.9
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 3.0e-200 702.6 679 58.3
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.1e-199 700.7 679 57.7
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 8.1e-198 694.5 599 60.6
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 8.9e-197 691.0 608 60.7
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.6e-196 689.5 536 67.5
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 4.9e-195 685.3 583 63.0
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.9e-194 683.3 624 59.1
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 4.2e-194 682.2 678 56.2
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 2.1e-193 679.9 608 59.2
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 4.6e-193 678.7 614 59.8
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 1.5e-191 673.7 603 58.7
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 1.9e-191 673.3 626 58.0
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 8.1e-190 667.9 605 59.3
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 2.4e-189 666.4 449 76.8
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 4.4e-188 662.1 497 67.8
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 4.4e-188 662.1 613 60.0
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 1.3e-187 660.6 559 60.5
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 2.2e-187 659.8 603 59.5
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 2.2e-187 659.8 621 56.8
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 4.2e-186 655.6 603 59.4
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 1.3e-184 650.6 642 56.4
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 3.9e-184 649.0 608 57.2
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 5.1e-184 648.7 602 58.6
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.1e-183 647.5 604 57.5
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 1.5e-183 647.1 525 60.2
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 5.6e-183 645.2 605 58.5
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 2.8e-182 642.9 605 58.7
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 6.9e-181 638.3 673 52.2
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 6.4e-179 631.7 673 51.6
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.4e-178 630.6 612 55.4
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 2.4e-178 629.8 605 56.4
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 7.1e-178 628.2 607 55.0
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 2.1e-177 626.7 605 55.7
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 3.0e-176 622.9 545 60.4
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 3.9e-176 622.5 617 53.2
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 5.1e-176 622.1 607 55.7
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 6.7e-176 621.7 605 55.7
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 8.1e-174 614.8 607 55.4
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 9.0e-173 611.3 555 59.1
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 4.9e-171 605.5 620 54.5
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 1.9e-170 603.6 603 55.2
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 3.2e-170 602.8 606 54.1
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 4.2e-170 602.4 599 54.8
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 7.1e-170 601.7 606 54.0
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 9.3e-170 601.3 603 54.9
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 9.3e-170 601.3 532 59.0
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 1.6e-169 600.5 599 54.6
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 1.0e-168 597.8 601 54.2
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 5.1e-168 595.5 610 54.9
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 1.8e-165 587.0 603 54.1
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 1.7e-163 580.5 609 54.0
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 5.0e-163 578.9 610 54.1
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 5.5e-162 575.5 612 51.0
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 2.7e-161 573.2 549 57.2
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 2.3e-160 570.1 574 54.2
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 2.5e-159 566.6 524 56.3
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 2.7e-153 546.6 622 49.2
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 9.7e-151 538.1 596 50.8
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 4.5e-148 529.3 628 46.8
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 1.1e-146 524.6 511 54.0
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 6.3e-142 508.8 620 51.8
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 3.6e-137 493.0 605 48.6
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 4.5e-124 449.5 643 41.4
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 8.0e-121 438.7 642 40.8
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 2.3e-99 367.5 259 69.9
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.4e-96 358.2 533 40.9
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 7.8e-92 342.4 569 38.8
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 7.3e-90 335.9 570 37.5
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 1.2e-89 335.1 484 39.9
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 1.2e-87 328.6 411 44.0
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 1.5e-87 328.2 243 66.3
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 1.7e-86 324.7 324 54.3
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 6.8e-80 302.8 328 49.4
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 2.0e-79 301.2 217 69.6
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 3.9e-51 207.2 257 46.7
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 2.4e-48 198.0 126 76.2
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 1.2e-10 72.8 156 31.4
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 2.4e-08 65.1 101 37.6
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 2.7e-07 61.6 139 34.5
BcaC07g37382 Brassica carinata HOM05D005308 ORTHO05D006494 2.2e-06 58.5 64 50.0


User provided reference genes

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