Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04491 Vaccinium macrocarpon HOM05D042237 ORTHO05D000221 1.7e-138 496.1 270 100.0
vmacro04489 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 1.8e-15 87.4 85 48.2
Rhsim07G0234700 Rhododendron simsii HOM05D000312 ORTHO05D000221 2.3e-15 87.0 68 54.4
vmacro04496 Vaccinium macrocarpon HOM05D042237 ORTHO05D426793 1.3e-13 81.3 57 66.7
Actinidia38025 Actinidia chinensis HOM05D000312 ORTHO05D000221 2.2e-13 80.5 60 56.7
Cc10_g03500 Coffea canephora HOM05D000312 ORTHO05D000221 2.7e-11 73.6 72 48.6
Dinv36031 Davidia involucrata HOM05D000312 ORTHO05D000221 1.5e-09 67.8 61 50.8
Nitab4.5_0012474g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.5e-09 67.0 62 50.0
Lj4A46T100 Lonicera japonica HOM05D000312 ORTHO05D000221 3.3e-09 66.6 62 48.4
Nitab4.5_0000110g0120 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.3e-09 66.6 62 50.0
PGSC0003DMG400016882 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.3e-09 66.6 62 48.4
Actinidia29844 Actinidia chinensis HOM05D000312 ORTHO05D000221 4.3e-09 66.2 59 49.2
CAN.G371.120 Capsicum annuum HOM05D000312 ORTHO05D000221 4.3e-09 66.2 62 48.4
Lsat_1_v5_gn_6_113140 Lactuca sativa HOM05D000312 ORTHO05D000221 1.2e-08 64.7 62 46.8
Solyc04g079800.4 Solanum lycopersicum HOM05D000312 ORTHO05D000221 1.2e-08 64.7 62 46.8
Sopen04g033380 Solanum pennellii HOM05D000312 ORTHO05D000221 1.2e-08 64.7 62 46.8
HanXRQChr08g0223621 Helianthus annuus HOM05D000312 ORTHO05D000221 2.1e-08 63.9 85 43.5
Actinidia29845 Actinidia chinensis HOM05D000312 ORTHO05D000221 8.1e-08 62.0 51 51.0
Manes.05G164400 Manihot esculenta HOM05D000312 ORTHO05D000221 1.1e-07 61.6 70 44.3
Cfa018451 Carpinus fangiana HOM05D000312 ORTHO05D000221 1.4e-07 61.2 61 44.3
TWI36G0935 Tripterygium wilfordii HOM05D000312 ORTHO05D000221 1.4e-07 61.2 88 39.8
Peaxi162Scf02754g00015 Petunia axillaris HOM05D000312 ORTHO05D000221 1.8e-07 60.8 62 43.5
MSTRG.25133 Avicennia marina HOM05D000312 ORTHO05D000221 2.4e-07 60.5 67 40.3
DCAR_019502 Daucus carota HOM05D000312 ORTHO05D000221 2.4e-07 60.5 68 41.2
SGA_v2.0_scaffold763G53568 Striga asiatica HOM05D000312 ORTHO05D000221 3.1e-07 60.1 66 40.9
vmacro04361 Vaccinium macrocarpon HOM05D000222 ORTHO05D426973 4.0e-07 59.7 42 73.8
Potri.002G132400 Populus trichocarpa HOM05D000312 ORTHO05D000221 5.2e-07 59.3 61 41.0
Haze_17615 Corylus avellana HOM05D000312 ORTHO05D000221 6.8e-07 58.9 61 44.3
TWI56G0890 Tripterygium wilfordii HOM05D000312 ORTHO05D000221 6.8e-07 58.9 60 43.3
MSTRG.1307 Avicennia marina HOM05D000312 ORTHO05D000221 8.9e-07 58.5 78 37.2
Atru.chr13.564 Acer truncatum HOM05D000312 ORTHO05D000221 1.2e-06 58.2 58 46.6
Thecc.08G020800 Theobroma cacao HOM05D000312 ORTHO05D000221 1.5e-06 57.8 67 40.3
Ciclev10001223m.g Citrus clementina HOM05D000312 ORTHO05D000221 2.0e-06 57.4 61 42.6
Gohir.A05G260480 Gossypium hirsutum HOM05D000312 ORTHO05D000221 2.6e-06 57.0 70 38.6
Hund26595 Selenicereus undatus HOM05D000312 ORTHO05D000221 2.6e-06 57.0 61 39.3
unitig_37.g12971 Utricularia gibba HOM05D000312 ORTHO05D000221 3.4e-06 56.6 68 38.2
Sc15g0006730 Simmondsia chinensis HOM05D000312 ORTHO05D000221 4.4e-06 56.2 61 44.3
Gohir.D05G262500 Gossypium hirsutum HOM05D000312 ORTHO05D000221 5.8e-06 55.8 70 37.1
Gorai.009G274400 Gossypium raimondii HOM05D000312 ORTHO05D000221 5.8e-06 55.8 70 37.1
Migut.C00673 Erythranthe guttata HOM05D000312 ORTHO05D000221 9.9e-06 55.1 60 41.7
Potri.014G039700 Populus trichocarpa HOM05D000312 ORTHO05D000221 9.9e-06 55.1 57 43.9


User provided reference genes

Program Settings