Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 0.0e+00 1750.3 843 100.0
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 0.0e+00 1545.0 843 88.6
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 0.0e+00 1375.5 843 79.5
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 0.0e+00 1364.4 841 77.9
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 0.0e+00 1359.7 843 76.9
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 0.0e+00 1330.5 794 81.1
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 0.0e+00 1269.2 843 72.1
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 0.0e+00 1267.3 841 71.8
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 0.0e+00 1257.7 843 71.8
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 0.0e+00 1253.0 843 71.1
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 0.0e+00 1237.6 837 70.5
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 0.0e+00 1236.9 843 70.5
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 0.0e+00 1236.9 843 70.5
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 0.0e+00 1236.5 841 69.4
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 0.0e+00 1236.1 839 70.3
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 0.0e+00 1235.7 845 69.7
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 0.0e+00 1233.8 843 69.9
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 0.0e+00 1233.4 841 70.0
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 0.0e+00 1227.2 841 70.0
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 0.0e+00 1226.1 844 69.8
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 0.0e+00 1226.1 843 68.3
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 0.0e+00 1225.3 841 69.4
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 0.0e+00 1223.0 839 69.2
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 0.0e+00 1222.6 842 68.3
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 0.0e+00 1219.1 843 68.8
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 0.0e+00 1218.4 839 68.9
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 0.0e+00 1216.4 893 66.5
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 0.0e+00 1216.1 876 67.6
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 0.0e+00 1216.1 843 68.3
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 0.0e+00 1215.7 844 69.9
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 0.0e+00 1210.7 842 69.8
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 0.0e+00 1204.9 856 68.6
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 0.0e+00 1204.9 844 69.2
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 0.0e+00 1203.3 843 69.3
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 0.0e+00 1202.2 841 69.0
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 0.0e+00 1196.8 841 68.7
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 0.0e+00 1192.6 925 64.3
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 0.0e+00 1187.9 841 68.1
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 0.0e+00 1183.3 841 68.1
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 0.0e+00 1182.2 874 65.1
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 0.0e+00 1179.5 844 67.8
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 0.0e+00 1177.5 853 66.8
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 0.0e+00 1170.6 843 68.0
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 0.0e+00 1168.7 871 66.0
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 0.0e+00 1168.3 843 67.4
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 0.0e+00 1167.5 843 65.7
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 0.0e+00 1165.6 812 68.8
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 0.0e+00 1164.1 843 67.1
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 0.0e+00 1162.5 844 67.8
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 0.0e+00 1157.5 844 66.8
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 0.0e+00 1157.5 843 66.3
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 0.0e+00 1154.0 854 65.7
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 0.0e+00 1152.9 843 65.6
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 0.0e+00 1150.6 843 66.0
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 0.0e+00 1149.8 843 65.7
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 0.0e+00 1139.0 851 64.5
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 0.0e+00 1126.3 844 67.4
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 0.0e+00 1119.4 846 64.1
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 0.0e+00 1117.1 841 64.6
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 0.0e+00 1114.4 843 63.8
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 0.0e+00 1113.2 846 64.1
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 0.0e+00 1111.3 837 63.3
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 0.0e+00 1109.4 843 63.8
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 0.0e+00 1107.8 839 63.6
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 0.0e+00 1106.3 838 63.6
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 0.0e+00 1100.9 846 63.1
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 0.0e+00 1095.1 844 63.3
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 0.0e+00 1093.2 839 63.2
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 0.0e+00 1092.8 845 63.4
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 0.0e+00 1089.3 846 62.3
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 0.0e+00 1088.6 838 62.1
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 0.0e+00 1082.4 837 62.1
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 0.0e+00 1076.2 828 62.9
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 5.8e-312 1074.3 887 60.2
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 2.0e-310 1068.9 896 59.8
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 8.2e-309 1063.5 838 62.1
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 8.2e-309 1063.5 838 62.1
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 7.0e-308 1060.4 844 61.4
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 2.6e-302 1042.0 842 60.3
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 1.3e-301 1039.6 844 61.1
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 2.2e-301 1038.9 837 60.0
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 2.8e-301 1038.5 848 58.0
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 4.1e-300 1034.6 845 59.4
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 2.0e-294 1015.8 840 60.0
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 1.3e-290 1003.0 749 66.2
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 9.8e-286 986.9 754 64.7
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 2.4e-276 955.7 632 72.9
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 6.8e-271 937.6 767 60.1
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 5.2e-255 884.8 848 52.2
COL.COLO4_05223 Corchorus olitorius HOM05D006313 ORTHO05D007853 2.6e-254 882.5 648 66.7
FvH4_2g37320 Fragaria vesca HOM05D006313 ORTHO05D007853 1.1e-252 877.1 649 65.9
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 7.6e-222 774.6 652 57.1
TPR.G38702 Trifolium pratense HOM05D006313 ORTHO05D007853 1.3e-208 730.7 646 57.1
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 3.9e-202 709.1 866 44.0
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 2.2e-197 693.3 866 44.2
Solyc04g082420.3 Solanum lycopersicum HOM05D006313 ORTHO05D007853 1.1e-188 664.5 497 66.4
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 1.8e-183 647.1 858 42.0
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 4.1e-175 619.4 569 55.5
Sc02g0009120 Simmondsia chinensis HOM05D006313 ORTHO05D007853 9.2e-167 591.7 492 60.8
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 2.6e-161 573.5 401 73.1
Manes.18G005201 Manihot esculenta HOM05D006313 ORTHO05D007853 1.0e-141 508.4 408 62.3
Os05g0345500 Oryza sativa ssp. japonica HOM05D006313 ORTHO05D007853 1.0e-141 508.4 498 51.8
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 5.1e-141 506.1 619 43.3
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 6.0e-134 482.6 315 71.7
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 1.7e-133 481.1 482 50.4
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 8.4e-120 435.6 499 47.1
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 7.6e-113 412.5 340 62.9
CSS0044355 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 4.8e-107 393.3 309 68.0
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 3.9e-93 347.1 193 78.2
SEGI_09974 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 5.9e-81 306.6 282 53.5
Sabra05G0194400 Salix brachista HOM05D006313 ORTHO05D007853 7.7e-81 306.2 237 64.6
ClCG11G018700 Citrullus lanatus HOM05D006313 ORTHO05D007853 3.2e-71 274.2 146 80.8
Sabra05G0194300 Salix brachista HOM05D006313 ORTHO05D007853 1.7e-67 261.9 149 78.5
CBR_g18852 Chara braunii HOM05D006313 ORTHO05D007853 7.2e-63 246.5 543 32.0
Cpa.g.sc801.5 Carica papaya HOM05D006313 ORTHO05D007853 7.5e-60 236.5 123 78.9
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 8.0e-54 216.5 193 49.7
CBR_g6381 Chara braunii HOM05D006313 ORTHO05D007853 3.9e-48 197.6 144 58.3
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 4.3e-47 194.1 883 25.3
SEGI_13417 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 2.3e-40 171.8 95 76.8
SEGI_14381 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 4.9e-35 154.1 224 42.0
unitig_22.g5882 Utricularia gibba HOM05D006313 ORTHO05D007853 6.6e-32 143.7 91 69.2
COL.COLO4_05222 Corchorus olitorius HOM05D006313 ORTHO05D007853 3.3e-23 114.8 54 88.9
SEGI_38873 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 3.2e-18 98.2 76 57.9
MCO09G352 Micromonas commoda HOM05D006313 ORTHO05D007853 6.0e-09 67.4 184 30.4
arahy.Tifrunner.gnm1.ann1.9M02QF Arachis hypogaea HOM05D000431 ORTHO05D007853 5.1e-08 64.3 50 48.0
BolC3t20551H Brassica oleracea HOM05D006313 ORTHO05D007853 9.6e-07 60.1 52 50.0
BcaC05g28338 Brassica carinata HOM05D004988 ORTHO05D018599 8.1e-06 57.0 50 50.0
FAN15G0925 Fragaria x ananassa HOM05D003949 ORTHO05D004504 8.1e-06 57.0 134 30.6
FAN15G2352 Fragaria x ananassa HOM05D003949 ORTHO05D004504 8.1e-06 57.0 134 30.6


User provided reference genes

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