Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04395 Vaccinium macrocarpon HOM05D006241 ORTHO05D007842 6.1e-69 263.8 118 100.0
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.3e-13 80.1 33 90.9
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.3e-13 80.1 33 90.9
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 6.2e-13 77.8 35 82.9
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 6.2e-13 77.8 35 82.9
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 5.3e-12 74.7 35 80.0
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 9.0e-12 73.9 33 84.8
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.2e-11 73.6 36 75.0
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 1.2e-11 73.6 35 80.0
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 1.2e-11 73.6 35 80.0
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.2e-11 73.6 35 80.0
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.2e-11 73.6 35 80.0
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 1.2e-11 73.6 35 80.0
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 1.2e-11 73.6 35 80.0
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 1.5e-11 73.2 36 83.3
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 3.4e-11 72.0 33 84.8
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 3.4e-11 72.0 33 84.8
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 3.4e-11 72.0 33 84.8
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 3.4e-11 72.0 33 84.8
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 3.4e-11 72.0 35 80.0
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 7.6e-11 70.9 36 80.6
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 7.6e-11 70.9 35 77.1
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 7.6e-11 70.9 35 77.1
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 9.9e-11 70.5 35 80.0
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 9.9e-11 70.5 35 77.1
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.3e-10 70.1 37 70.3
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 1.3e-10 70.1 35 82.9
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.3e-10 70.1 33 81.8
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 1.7e-10 69.7 53 64.2
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 1.7e-10 69.7 31 87.1
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 1.7e-10 69.7 35 80.0
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.7e-10 69.7 33 81.8
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 1.7e-10 69.7 33 81.8
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 2.2e-10 69.3 35 77.1
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 2.2e-10 69.3 35 82.9
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 2.2e-10 69.3 35 82.9
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 2.9e-10 68.9 31 83.9
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 2.9e-10 68.9 35 80.0
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 2.9e-10 68.9 37 81.1
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 3.8e-10 68.6 27 96.3
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 4.9e-10 68.2 28 92.9
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 4.9e-10 68.2 28 92.9
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 6.4e-10 67.8 28 89.3
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 6.4e-10 67.8 28 89.3
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 6.4e-10 67.8 31 80.6
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 8.4e-10 67.4 31 77.4
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 8.4e-10 67.4 31 77.4
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 8.4e-10 67.4 31 77.4
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 8.4e-10 67.4 31 77.4
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 8.4e-10 67.4 45 60.0
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 1.1e-09 67.0 36 77.8
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 1.1e-09 67.0 36 77.8
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 1.1e-09 67.0 36 75.0
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.1e-09 67.0 35 80.0
GSVIVG01008691001 Vitis vinifera HOM05D006241 ORTHO05D007842 1.1e-09 67.0 35 77.1
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 1.4e-09 66.6 35 77.1
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 1.4e-09 66.6 31 80.6
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.4e-09 66.6 35 77.1
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 1.9e-09 66.2 28 85.7
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 1.9e-09 66.2 28 85.7
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 2.4e-09 65.9 31 77.4
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 3.2e-09 65.5 50 60.0
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 3.2e-09 65.5 32 84.4
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 77.1
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 5.5e-09 64.7 35 71.4
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 7.1e-09 64.3 33 69.7
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 7.1e-09 64.3 35 77.1
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 9.3e-09 63.9 33 69.7
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 1.2e-08 63.5 31 80.6
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 1.6e-08 63.2 35 68.6
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 2.1e-08 62.8 35 71.4
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 2.1e-08 62.8 35 71.4
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 2.7e-08 62.4 27 81.5
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 3.5e-08 62.0 30 83.3
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 4.6e-08 61.6 35 71.4
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 6.0e-08 61.2 35 71.4
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 6.0e-08 61.2 35 71.4
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 7.9e-08 60.8 27 77.8
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 1.0e-07 60.5 32 75.0
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 1.0e-07 60.5 28 85.7
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 1.0e-07 60.5 32 75.0
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 1.3e-07 60.1 41 58.5
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 1.3e-07 60.1 24 91.7
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 2.3e-07 59.3 28 78.6
Os06g0725400 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 3.0e-07 58.9 28 78.6
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 8.7e-07 57.4 28 75.0
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 8.7e-07 57.4 28 75.0
Pp3c21_21340 Physcomitrium patens HOM05D006241 ORTHO05D007842 1.1e-06 57.0 33 69.7


User provided reference genes

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