Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 4.6e-118 427.9 219 100.0
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 1.3e-96 356.7 187 97.3
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 2.5e-63 246.1 172 79.1
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 1.1e-52 210.7 166 77.1
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 4.5e-49 198.7 144 75.7
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 4.8e-43 178.7 148 66.9
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 8.2e-43 177.9 133 67.7
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 2.6e-41 172.9 153 59.5
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 1.1e-36 157.5 148 58.1
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 1.5e-36 157.1 133 60.2
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 2.0e-36 156.8 112 67.9
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.3e-35 154.1 94 78.7
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 1.7e-35 153.7 122 68.9
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 2.2e-35 153.3 93 77.4
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 2.8e-35 152.9 89 80.9
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 3.7e-35 152.5 122 69.7
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 3.7e-35 152.5 143 58.7
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 4.8e-35 152.1 146 55.5
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 4.8e-35 152.1 145 58.6
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 8.2e-35 151.4 110 69.1
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 1.1e-34 151.0 109 67.9
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 1.1e-34 151.0 134 61.2
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 1.8e-34 150.2 139 56.1
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 1.8e-34 150.2 147 57.8
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 2.4e-34 149.8 126 60.3
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 4.1e-34 149.1 130 57.7
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 5.3e-34 148.7 104 71.2
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 7.0e-34 148.3 101 72.3
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 1.2e-33 147.5 144 56.9
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 2.0e-33 146.7 81 85.2
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 2.0e-33 146.7 142 56.3
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 2.0e-33 146.7 106 67.0
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 2.6e-33 146.4 87 80.5
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 3.5e-33 146.0 144 55.6
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 4.5e-33 145.6 136 57.4
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 1.0e-32 144.4 106 70.8
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 1.0e-32 144.4 143 55.2
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 1.3e-32 144.1 86 79.1
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 1.7e-32 143.7 86 79.1
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 2.2e-32 143.3 146 50.7
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 2.9e-32 142.9 102 71.6
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 5.0e-32 142.1 151 58.3
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 1.5e-31 140.6 101 71.3
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.5e-31 140.6 101 71.3
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 1.5e-31 140.6 142 52.8
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 1.5e-31 140.6 137 56.9
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.9e-31 140.2 101 70.3
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 2.5e-31 139.8 149 53.7
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 3.2e-31 139.4 121 59.5
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 4.2e-31 139.0 87 73.6
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 4.2e-31 139.0 105 65.7
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 5.5e-31 138.7 86 76.7
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 5.5e-31 138.7 115 61.7
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 9.4e-31 137.9 145 53.1
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 1.6e-30 137.1 140 55.7
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 1.6e-30 137.1 114 62.3
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 2.1e-30 136.7 139 57.6
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 2.1e-30 136.7 82 79.3
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 2.7e-30 136.3 82 78.0
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 4.7e-30 135.6 143 53.8
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 4.7e-30 135.6 145 54.5
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 6.1e-30 135.2 130 56.2
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 6.1e-30 135.2 140 52.9
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 8.0e-30 134.8 143 56.6
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 8.0e-30 134.8 112 62.5
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 1.0e-29 134.4 108 62.0
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.4e-29 134.0 123 63.4
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 1.4e-29 134.0 104 62.5
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 1.4e-29 134.0 99 69.7
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 1.4e-29 134.0 99 66.7
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 1.4e-29 134.0 81 79.0
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 1.8e-29 133.7 112 59.8
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 3.0e-29 132.9 78 78.2
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 4.0e-29 132.5 73 78.1
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 4.0e-29 132.5 138 52.9
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 5.2e-29 132.1 150 51.3
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 6.7e-29 131.7 138 52.2
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 6.7e-29 131.7 119 60.5
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 1.2e-28 131.0 86 72.1
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 1.2e-28 131.0 142 52.8
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 1.5e-28 130.6 129 53.5
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 2.0e-28 130.2 96 68.8
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 2.0e-28 130.2 133 53.4
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 4.4e-28 129.0 102 63.7
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.7e-28 128.6 137 54.0
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 7.5e-28 128.3 83 71.1
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 1.3e-27 127.5 108 63.0
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 1.3e-27 127.5 79 77.2
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 1.7e-27 127.1 84 70.2
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 1.7e-27 127.1 95 67.4
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 1.7e-27 127.1 83 69.9
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 2.2e-27 126.7 74 81.1
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 3.7e-27 125.9 74 79.7
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 3.7e-27 125.9 91 69.2
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 8.2e-27 124.8 78 74.4
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 1.1e-26 124.4 109 60.6
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 1.1e-26 124.4 85 68.2
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.4e-26 124.0 137 52.6
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 3.1e-26 122.9 99 61.6
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 4.1e-26 122.5 95 65.3
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 4.1e-26 122.5 78 74.4
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 4.1e-26 122.5 95 65.3
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 4.1e-26 122.5 95 65.3
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 4.1e-26 122.5 95 65.3
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 2.0e-25 120.2 112 54.5
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 5.9e-25 118.6 91 68.1
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 5.9e-25 118.6 133 48.9
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.3e-24 117.5 80 68.8
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 1.3e-24 117.5 92 62.0
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 1.7e-24 117.1 80 72.5
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 2.2e-24 116.7 83 67.5
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 2.9e-24 116.3 115 54.8
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 3.8e-24 115.9 80 66.2
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 3.8e-24 115.9 132 50.8
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 6.5e-24 115.2 80 67.5
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 6.5e-24 115.2 74 68.9
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 9.4e-23 111.3 79 69.6
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 1.0e-21 107.8 62 82.3
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 1.4e-21 107.5 84 65.5
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 9.8e-20 101.3 66 68.2
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 5.4e-18 95.5 112 48.2
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 5.9e-17 92.0 94 51.1
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 1.0e-16 91.3 84 52.4
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.5e-15 85.5 59 66.1
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.5e-15 85.5 59 66.1
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 7.2e-15 85.1 57 66.7
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 1.6e-14 84.0 70 55.7
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 8.0e-14 81.6 52 67.3
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 1.0e-13 81.3 91 52.7
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 2.3e-13 80.1 52 73.1
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 2.3e-13 80.1 52 73.1
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 1.2e-12 77.8 51 64.7
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 1.6e-09 67.4 51 60.8
Nn6g32378 Nelumbo nucifera HOM05D005516 ORTHO05D006713 1.0e-08 64.7 93 41.9


User provided reference genes

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