Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04352 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 1.7e-193 679.1 338 100.0
vmacro21413 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 2.6e-160 568.9 338 85.2
RhsimUnG0066300 Rhododendron simsii HOM05D004449 ORTHO05D005473 2.7e-154 548.9 344 82.0
Actinidia05427 Actinidia chinensis HOM05D004449 ORTHO05D005473 2.4e-142 509.2 338 76.3
Rhsim07G0247400 Rhododendron simsii HOM05D004449 ORTHO05D005473 8.5e-140 500.7 404 67.6
CSS0045328 Camellia sinensis var. sinensis HOM05D004449 ORTHO05D005473 1.5e-139 500.0 339 76.7
QL07p038716 Quercus lobata HOM05D004449 ORTHO05D005473 1.4e-126 456.8 335 69.6
QL07p038966 Quercus lobata HOM05D004449 ORTHO05D005473 1.4e-126 456.8 335 69.6
Ciclev10012240m.g Citrus clementina HOM05D004449 ORTHO05D005473 1.2e-125 453.8 326 69.3
Cfa016611 Carpinus fangiana HOM05D004449 ORTHO05D005473 3.5e-125 452.2 338 68.9
TWI74G1045 Tripterygium wilfordii HOM05D004449 ORTHO05D005473 2.9e-124 449.1 313 70.6
Hma1.2p1_0820F.1_g223850 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 8.6e-124 447.6 363 66.7
GSVIVG01033847001 Vitis vinifera HOM05D004449 ORTHO05D005473 8.6e-124 447.6 320 70.9
Haze_19615 Corylus avellana HOM05D004449 ORTHO05D005473 1.9e-123 446.4 338 67.8
Hma1.2p1_0084F.1_g043840 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 1.9e-123 446.4 338 69.8
CiPaw.10G010000 Carya illinoinensis HOM05D004449 ORTHO05D005473 2.8e-122 442.6 340 67.1
Lsat_1_v5_gn_8_77140 Lactuca sativa HOM05D004449 ORTHO05D005473 6.1e-122 441.4 337 66.8
Phvul.009G260700 Phaseolus vulgaris HOM05D004449 ORTHO05D005473 8.0e-122 441.0 309 71.8
TAR623G0834 Trochodendron aralioides HOM05D004449 ORTHO05D005473 1.8e-121 439.9 341 68.0
Eucgr.A02663 Eucalyptus grandis HOM05D004449 ORTHO05D005473 2.3e-121 439.5 338 66.6
CANSAT64G1281 Cannabis sativa HOM05D004449 ORTHO05D005473 8.9e-121 437.6 328 68.3
Potri.004G090500 Populus trichocarpa HOM05D004449 ORTHO05D005473 1.2e-120 437.2 324 68.5
Lalb_Chr06g0172241 Lupinus albus HOM05D004449 ORTHO05D005473 1.5e-120 436.8 306 71.9
RcHm_v2.0_Chr3g0473801 Rosa chinensis HOM05D004449 ORTHO05D005473 1.5e-120 436.8 338 65.4
ECA248G0038 Erigeron canadensis HOM05D004449 ORTHO05D005473 5.7e-120 434.9 323 69.0
MD14G1023300 Malus domestica HOM05D004449 ORTHO05D005473 5.7e-120 434.9 301 71.8
Peaxi162Scf00858g00311 Petunia axillaris HOM05D004449 ORTHO05D005473 7.5e-120 434.5 335 66.6
Manes.08G025500 Manihot esculenta HOM05D004449 ORTHO05D005473 1.7e-119 433.3 337 66.8
Ca_00406_v3 Cicer arietinum L. HOM05D004449 ORTHO05D005473 2.2e-119 433.0 316 70.6
SalBow3G1569 Salvia bowleyana HOM05D004449 ORTHO05D005473 2.2e-119 433.0 338 65.1
ClCG08G005200 Citrullus lanatus HOM05D004449 ORTHO05D005473 2.9e-119 432.6 338 66.6
Lj1g0018712 Lotus japonicus HOM05D004449 ORTHO05D005473 3.7e-119 432.2 301 72.1
MELO3C022184.2 Cucumis melo HOM05D004449 ORTHO05D005473 4.9e-119 431.8 338 65.7
MBI17_g08343_MAGBIO Magnolia biondii HOM05D004449 ORTHO05D005473 4.9e-119 431.8 310 70.3
PGR042G0526 Punica granatum HOM05D004449 ORTHO05D005473 1.1e-118 430.6 336 66.4
VMungo1309G2207 Vigna mungo HOM05D004449 ORTHO05D005473 1.1e-118 430.6 326 67.8
Sc02g0000280 Simmondsia chinensis HOM05D004449 ORTHO05D005473 1.4e-118 430.3 327 66.7
Nitab4.5_0000582g0210 Nicotiana tabacum HOM05D004449 ORTHO05D005473 4.1e-118 428.7 313 69.6
MSTRG.19262 Avicennia marina HOM05D004449 ORTHO05D005473 7.0e-118 427.9 293 71.7
PSO339G4690 Papaver somniferum HOM05D004449 ORTHO05D005473 7.0e-118 427.9 321 66.7
TPR.G11735 Trifolium pratense HOM05D004449 ORTHO05D005473 7.0e-118 427.9 315 68.6
Cc06_g05800 Coffea canephora HOM05D004449 ORTHO05D005473 9.2e-118 427.6 307 69.7
Glyma.13G153700 Glycine max HOM05D004449 ORTHO05D005473 9.2e-118 427.6 290 72.8
Medtr2g015010 Medicago truncatula HOM05D004449 ORTHO05D005473 9.2e-118 427.6 314 68.8
Nn6g34893 Nelumbo nucifera HOM05D004449 ORTHO05D005473 9.2e-118 427.6 342 64.6
MD12G1036500 Malus domestica HOM05D004449 ORTHO05D005473 1.2e-117 427.2 307 69.7
PSO384G3644 Papaver somniferum HOM05D004449 ORTHO05D005473 1.2e-117 427.2 308 68.2
CAN.G694.90 Capsicum annuum HOM05D004449 ORTHO05D005473 1.6e-117 426.8 343 64.7
Aqoxy1G00845 Aquilegia oxysepala HOM05D004449 ORTHO05D005473 2.0e-117 426.4 339 65.8
SalBow4G0277 Salvia bowleyana HOM05D004449 ORTHO05D005473 2.0e-117 426.4 293 71.3
Sopen05g034560 Solanum pennellii HOM05D004449 ORTHO05D005473 2.0e-117 426.4 330 66.4
Nitab4.5_0004212g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 3.5e-117 425.6 342 65.2
Potri.017G124800 Populus trichocarpa HOM05D004449 ORTHO05D005473 3.5e-117 425.6 327 66.1
PGSC0003DMG400023338 Solanum tuberosum HOM05D004449 ORTHO05D005473 4.6e-117 425.2 329 66.0
Glyma.02G054800 Glycine max HOM05D004449 ORTHO05D005473 5.9e-117 424.9 290 73.8
FvH4_6g18790 Fragaria vesca HOM05D004449 ORTHO05D005473 7.8e-117 424.5 339 64.9
HanXRQChr03g0063591 Helianthus annuus HOM05D004449 ORTHO05D005473 7.8e-117 424.5 340 65.6
Sed0019477 Sechium edule HOM05D004449 ORTHO05D005473 7.8e-117 424.5 333 65.8
Nitab4.5_0006507g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 1.0e-116 424.1 302 69.5
Solyc05g056150.4 Solanum lycopersicum HOM05D004449 ORTHO05D005473 1.3e-116 423.7 330 66.1
EL10Ac8g19596 Beta vulgaris HOM05D004449 ORTHO05D005473 2.5e-115 419.5 335 64.2
FAN02G4498 Fragaria x ananassa HOM05D004449 ORTHO05D005473 4.3e-115 418.7 347 64.6
Gohir.D04G099600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 5.6e-115 418.3 335 63.9
Gorai.009G402500 Gossypium raimondii HOM05D004449 ORTHO05D005473 5.6e-115 418.3 335 63.6
Gohir.A04G062600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 3.6e-114 415.6 335 63.6
BraA05t19914Z Brassica rapa HOM05D004449 ORTHO05D005473 1.0e-113 414.1 320 65.6
Migut.J01033 Erythranthe guttata HOM05D004449 ORTHO05D005473 5.2e-113 411.8 290 71.0
BcaB02g09374 Brassica carinata HOM05D004449 ORTHO05D005473 1.2e-112 410.6 320 64.7
BcaB01g03853 Brassica carinata HOM05D004449 ORTHO05D005473 2.0e-112 409.8 314 65.3
Thhalv10016966m.g Eutrema salsugineum HOM05D004449 ORTHO05D005473 2.0e-112 409.8 281 71.5
AL4G32330 Arabidopsis lyrata HOM05D004449 ORTHO05D005473 2.6e-112 409.5 335 63.9
THA.LOC104804908 Tarenaya hassleriana HOM05D004449 ORTHO05D005473 4.4e-112 408.7 287 70.7
BolC4t22839H Brassica oleracea HOM05D004449 ORTHO05D005473 5.8e-112 408.3 323 64.7
AT2G36230 Arabidopsis thaliana HOM05D004449 ORTHO05D005473 9.8e-112 407.5 295 68.5
Carub.0004s1799 Capsella rubella HOM05D004449 ORTHO05D005473 1.7e-111 406.8 295 69.2
Sp4g18450 Schrenkiella parvula HOM05D004449 ORTHO05D005473 2.2e-111 406.4 280 71.1
FAN05G3501 Fragaria x ananassa HOM05D004449 ORTHO05D005473 2.9e-111 406.0 374 59.1
FAN14G0980 Fragaria x ananassa HOM05D004449 ORTHO05D005473 2.9e-111 406.0 327 63.9
FAN05G3651 Fragaria x ananassa HOM05D004449 ORTHO05D005473 4.9e-111 405.2 374 59.9
Aa31LG5G21350 Aethionema arabicum HOM05D004449 ORTHO05D005473 6.4e-111 404.8 323 63.5
A05p09610 Brassica napus HOM05D004449 ORTHO05D005473 6.4e-111 404.8 320 64.1
BraA03t11251Z Brassica rapa HOM05D004449 ORTHO05D005473 6.4e-111 404.8 315 66.0
C03p23440 Brassica napus HOM05D004449 ORTHO05D005473 8.3e-111 404.4 289 69.6
BolC3t14740H Brassica oleracea HOM05D004449 ORTHO05D005473 8.3e-111 404.4 289 69.6
Lj2A137G26 Lonicera japonica HOM05D004449 ORTHO05D005473 2.4e-110 402.9 275 73.1
A03p20000 Brassica napus HOM05D004449 ORTHO05D005473 5.4e-110 401.7 315 65.7
Dinv21204 Davidia involucrata HOM05D004449 ORTHO05D005473 9.2e-110 401.0 265 75.1
ATR1125G096 Amborella trichopoda HOM05D004449 ORTHO05D005473 2.0e-109 399.8 321 63.2
CARHR130470 Cardamine hirsuta HOM05D004449 ORTHO05D005473 4.6e-109 398.7 308 66.2
CDE07G1047 Ceratophyllum demersum HOM05D004449 ORTHO05D005473 2.8e-106 389.4 283 66.8
Zm00001eb020250 Zea mays HOM05D004449 ORTHO05D005473 8.9e-105 384.4 320 61.9
SHI27835 Sapria himalayana HOM05D004449 ORTHO05D005473 2.6e-104 382.9 297 64.3
Atru.chr12.1330 Acer truncatum HOM05D004449 ORTHO05D005473 3.4e-104 382.5 294 66.0
Duzib093G2067 Durio zibethinus HOM05D004449 ORTHO05D005473 7.5e-104 381.3 285 68.4
Zm00001eb287580 Zea mays HOM05D004449 ORTHO05D005473 8.3e-103 377.9 291 65.3
BcaC02g11725 Brassica carinata HOM05D004449 ORTHO05D005473 2.1e-101 373.2 303 64.0
Rhsim07G0247300 Rhododendron simsii HOM05D004449 ORTHO05D005473 2.1e-101 373.2 318 63.8
DCAR_006449 Daucus carota HOM05D004449 ORTHO05D005473 3.5e-101 372.5 253 72.7
Ah.04g162190 Amaranthus hybridus HOM05D005123 ORTHO05D006532 7.8e-101 371.3 277 67.5
C04p11920 Brassica napus HOM05D004449 ORTHO05D005473 1.7e-100 370.2 271 68.3
CiPaw.09G014500 Carya illinoinensis HOM05D004449 ORTHO05D005473 3.0e-100 369.4 334 59.9
Nitab4.5_0000071g0140 Nicotiana tabacum HOM05D004449 ORTHO05D005473 1.1e-99 367.5 317 59.9
HPP92_001188 Vanilla planifolia HOM05D004449 ORTHO05D005473 1.6e-98 363.6 281 64.4
AUR62036483 Chenopodium quinoa HOM05D004449 ORTHO05D005473 2.8e-98 362.8 249 71.5
SGA_v2.0_scaffold75G24747 Striga asiatica HOM05D004449 ORTHO05D005473 5.2e-97 358.6 298 62.1
Prupe.7G109700 Prunus persica HOM05D004449 ORTHO05D005473 3.4e-96 355.9 227 75.8
BcaC02g11727 Brassica carinata HOM05D004449 ORTHO05D005473 7.6e-96 354.8 308 60.1
AagrBONN_evm.TU.Sc2ySwM_344.169 Anthoceros agrestis HOM05D004449 ORTHO05D005473 3.8e-95 352.4 286 62.6
Pp3c12_22840 Physcomitrium patens HOM05D004449 ORTHO05D005473 8.4e-95 351.3 286 60.1
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 3.5e-93 345.9 303 60.4
vmacro04351 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 1.0e-92 344.4 265 72.1
CsaV3_5G040040 Cucumis sativus L. HOM05D004449 ORTHO05D005473 2.8e-90 336.3 256 66.4
Cre12.g495300 Chlamydomonas reinhardtii HOM05D004449 ORTHO05D005473 1.1e-89 334.3 297 56.2
SMO271G0065 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 8.9e-89 331.3 284 60.2
AUR62037092 Chenopodium quinoa HOM05D004449 ORTHO05D005473 9.9e-88 327.8 273 63.0
Thecc.05G089600 Theobroma cacao HOM05D004449 ORTHO05D005473 1.9e-86 323.6 241 68.5
MCO11G008 Micromonas commoda HOM05D004449 ORTHO05D005473 7.8e-85 318.2 286 55.2
Cpa.g.sc999.2 Carica papaya HOM05D004449 ORTHO05D005473 3.0e-84 316.2 342 53.5
PRCOL_00002294 Prasinoderma coloniale HOM05D004449 ORTHO05D005473 4.3e-83 312.4 295 56.6
RhsimUnG0066500 Rhododendron simsii HOM05D004449 ORTHO05D005473 4.3e-83 312.4 183 84.7
BcaB02g09373 Brassica carinata HOM05D004449 ORTHO05D005473 7.3e-83 311.6 291 58.1
Mapoly0011s0027 Marchantia polymorpha HOM05D004449 ORTHO05D005473 1.4e-81 307.4 290 54.1
VMungo0647G1368 Vigna mungo HOM05D004449 ORTHO05D005473 2.4e-81 306.6 267 61.8
Atru.chr8.1532 Acer truncatum HOM05D004449 ORTHO05D005473 7.9e-77 291.6 196 73.5
CBR_g21822 Chara braunii HOM05D004449 ORTHO05D005473 2.1e-74 283.5 296 52.0
Lalb_Chr06g0172381 Lupinus albus HOM05D004449 ORTHO05D005473 5.3e-73 278.9 199 70.9
ClCG08G000960 Citrullus lanatus HOM05D004449 ORTHO05D005473 6.2e-66 255.4 204 67.6
RcHm_v2.0_Chr5g0027171 Rosa chinensis HOM05D004449 ORTHO05D005473 1.9e-62 243.8 170 69.4
Psat1g201080 Pisum sativum HOM05D004449 ORTHO05D005473 1.2e-61 241.1 177 67.8
Oeu056880.1 Olea europaea HOM05D004449 ORTHO05D005473 3.9e-60 236.1 176 66.5
COL.COLO4_29729 Corchorus olitorius HOM05D004449 ORTHO05D005473 1.3e-55 221.1 162 69.8
BcaC02g11729 Brassica carinata HOM05D004449 ORTHO05D005473 1.3e-50 204.5 169 64.5
Cfa023382 Carpinus fangiana HOM05D004449 ORTHO05D005473 1.4e-49 201.1 282 40.4
arahy.Tifrunner.gnm1.ann1.1FC84E Arachis hypogaea HOM05D004449 ORTHO05D005473 6.9e-49 198.7 143 70.6
arahy.Tifrunner.gnm1.ann1.IMVN0M Arachis hypogaea HOM05D004449 ORTHO05D005473 6.9e-49 198.7 143 70.6
arahy.Tifrunner.gnm1.ann1.H91IF8 Arachis hypogaea HOM05D004449 ORTHO05D005473 2.9e-47 193.4 143 67.8
arahy.Tifrunner.gnm1.ann1.L677I4 Arachis hypogaea HOM05D004449 ORTHO05D005473 2.9e-47 193.4 143 67.8
ECA233G4866 Erigeron canadensis HOM05D004449 ORTHO05D005473 1.1e-46 191.4 122 75.4
Cc11_g01850 Coffea canephora HOM05D004449 ORTHO05D005473 9.4e-46 188.3 172 58.7
RcHm_v2.0_Chr4g0393091 Rosa chinensis HOM05D004449 ORTHO05D005473 9.1e-41 171.8 108 76.9
SEGI_28293 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 5.5e-38 162.5 161 53.4
Mapoly0100s0062 Marchantia polymorpha HOM05D004449 ORTHO05D005473 2.3e-36 157.1 126 55.6
unitig_8.g4306 Utricularia gibba HOM05D004449 ORTHO05D005473 7.0e-33 145.6 307 34.2
CDE04G3206 Ceratophyllum demersum HOM05D004449 ORTHO05D005473 9.1e-33 145.2 157 49.0
SMO308G0039 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 4.5e-32 142.9 164 48.8
RcHm_v2.0_Chr1g0350151 Rosa chinensis HOM05D004449 ORTHO05D005473 1.9e-30 137.5 86 74.4
CDE04G2184 Ceratophyllum demersum HOM05D004449 ORTHO05D000837 1.6e-29 134.4 193 40.4
Os05g0400800 Oryza sativa ssp. japonica HOM05D004449 ORTHO05D005473 2.1e-29 134.0 100 66.0
COL.COLO4_29730 Corchorus olitorius HOM05D004449 ORTHO05D005473 3.6e-29 133.3 84 72.6
Lalb_Chr06g0172371 Lupinus albus HOM05D004449 ORTHO05D005473 1.8e-25 120.9 70 81.4
SMO164G0227 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 1.8e-25 120.9 138 49.3
BcaC02g11730 Brassica carinata HOM05D004449 ORTHO05D005473 4.5e-24 116.3 102 58.8
TAR369G0358 Trochodendron aralioides HOM05D003904 ORTHO05D004378 1.3e-23 114.8 99 64.6
Rhsim07G0247200 Rhododendron simsii HOM05D004449 ORTHO05D005473 1.7e-23 114.4 69 79.7
Rhsim09G0019600 Rhododendron simsii HOM05D004449 ORTHO05D005473 1.2e-21 108.2 70 81.4
SEGI_22783 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 4.4e-19 99.8 94 58.5
arahy.Tifrunner.gnm1.ann1.E2537D Arachis hypogaea HOM05D019151 ORTHO05D005473 5.7e-19 99.4 61 75.4
arahy.Tifrunner.gnm1.ann1.TG6NMP Arachis hypogaea HOM05D019151 ORTHO05D005473 5.7e-19 99.4 61 75.4
Sabra04G0060800 Salix brachista HOM05D004449 ORTHO05D005473 3.1e-17 93.6 198 36.9
RcHm_v2.0_Chr4g0409701 Rosa chinensis HOM05D004449 ORTHO05D005473 3.3e-14 83.6 50 76.0


User provided reference genes

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