Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 1.0e-137 493.4 257 100.0
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 3.5e-53 212.6 151 73.5
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.3e-50 204.1 149 72.5
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 4.0e-49 199.1 151 69.5
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 5.8e-48 195.3 151 67.5
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 4.9e-47 192.2 159 62.9
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 3.2e-46 189.5 151 64.9
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 4.2e-46 189.1 151 64.9
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 5.5e-46 188.7 151 64.9
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 7.1e-46 188.3 151 64.2
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 7.1e-46 188.3 151 64.2
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.3e-46 188.0 151 63.6
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.3e-46 188.0 151 63.6
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 1.6e-45 187.2 148 64.9
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 1.6e-45 187.2 149 65.8
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 2.1e-45 186.8 149 65.8
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 2.1e-45 186.8 149 66.4
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 4.6e-45 185.7 151 62.9
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 7.9e-45 184.9 151 62.9
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 7.9e-45 184.9 149 64.4
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.0e-44 184.5 149 63.8
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 1.0e-44 184.5 153 61.4
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 1.0e-44 184.5 149 63.8
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 2.3e-44 183.3 151 63.6
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 5.1e-44 182.2 149 62.4
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 5.1e-44 182.2 149 65.1
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 8.7e-44 181.4 149 63.1
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 1.1e-43 181.0 148 63.5
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.1e-43 181.0 151 59.6
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.1e-43 181.0 148 63.5
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 1.5e-43 180.6 157 61.8
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 1.9e-43 180.3 151 62.9
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.5e-43 179.9 149 63.8
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 2.5e-43 179.9 151 59.6
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 2.5e-43 179.9 149 63.1
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 3.3e-43 179.5 151 62.9
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 3.3e-43 179.5 148 62.8
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 4.3e-43 179.1 151 60.3
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 9.6e-43 177.9 149 59.7
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 9.6e-43 177.9 149 59.7
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 9.6e-43 177.9 149 59.7
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 9.6e-43 177.9 149 62.4
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 9.6e-43 177.9 149 59.7
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 1.6e-42 177.2 149 59.7
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.6e-42 177.2 149 59.7
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 1.6e-42 177.2 149 59.7
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 2.1e-42 176.8 149 59.1
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 2.8e-42 176.4 149 59.1
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 2.8e-42 176.4 149 59.1
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 2.8e-42 176.4 151 60.3
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.7e-42 176.0 149 58.4
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.7e-42 176.0 149 59.1
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 4.8e-42 175.6 154 60.4
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 8.2e-42 174.9 149 58.4
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.4e-41 173.3 148 58.1
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 2.4e-41 173.3 148 58.1
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 2.4e-41 173.3 148 58.1
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 2.4e-41 173.3 148 58.1
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.4e-41 173.3 149 59.1
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 2.4e-41 173.3 149 59.1
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 4.0e-41 172.6 151 60.3
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 6.9e-41 171.8 151 59.6
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 6.9e-41 171.8 151 60.9
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 6.9e-41 171.8 148 60.8
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 6.9e-41 171.8 151 59.6
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 9.0e-41 171.4 148 57.4
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 9.0e-41 171.4 149 58.4
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.2e-40 171.0 153 58.2
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 3.4e-40 169.5 151 58.9
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 7.6e-40 168.3 151 58.3
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.0e-39 167.9 148 59.5
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 2.2e-39 166.8 151 59.6
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 2.9e-39 166.4 189 48.7
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 3.8e-39 166.0 151 57.6
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.8e-39 166.0 129 62.8
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 3.8e-39 166.0 151 57.6
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 6.5e-39 165.2 151 58.3
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 3.2e-38 162.9 151 57.6
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 9.3e-38 161.4 149 56.4
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 9.3e-38 161.4 149 56.4
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.6e-37 160.6 153 54.2
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 3.5e-37 159.5 151 57.6
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 6.0e-37 158.7 189 48.1
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.0e-36 157.9 151 56.3
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.8e-36 157.1 153 56.2
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 3.0e-36 156.4 148 55.4
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.1e-35 154.5 148 56.8
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.7e-35 151.4 140 57.9
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 1.1e-33 147.9 153 52.9
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 3.1e-33 146.4 149 52.3
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 3.4e-32 142.9 152 53.3
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.9e-31 139.8 159 50.3
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.9e-30 137.1 151 47.7
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 9.3e-30 134.8 151 45.7
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 1.0e-28 131.3 136 54.4
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.5e-27 127.5 149 47.7
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.3e-26 124.4 149 49.0
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 2.2e-23 113.6 109 56.9
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.9e-22 110.5 77 68.8
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 2.5e-22 110.2 90 63.3
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 3.0e-20 103.2 149 42.3
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 1.1e-19 101.3 104 51.9
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 2.2e-18 97.1 92 55.4
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 2.8e-18 96.7 82 61.0
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 4.5e-16 89.4 70 61.4
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 5.9e-16 89.0 70 58.6
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 4.2e-14 82.8 73 58.9
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 4.7e-13 79.3 58 62.1
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.1e-11 74.7 69 52.2
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 1.1e-11 74.7 151 31.8
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.8e-09 67.4 132 33.3
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 2.0e-08 63.9 152 28.9
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 5.0e-07 59.3 49 59.2
vmacro04729 Vaccinium macrocarpon HOM05D000387 ORTHO05D000258 6.5e-07 58.9 33 81.8
vmacro02262 Vaccinium macrocarpon HOM05D000180 ORTHO05D000099 9.4e-06 55.1 29 82.8


User provided reference genes

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