Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 7.8e-220 766.9 385 100.0
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.2e-66 258.1 307 47.9
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.4e-53 212.2 148 67.6
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-48 198.0 252 47.6
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-32 142.9 144 53.5
vmacro23035 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 2.0e-26 124.4 156 50.0
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-24 116.3 155 41.9
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.2e-23 115.2 159 40.9
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.0e-22 112.1 156 41.0
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.0e-22 112.1 166 39.2
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.9e-22 109.0 166 40.4
vmacro00665 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 8.9e-22 109.0 158 46.8
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 3.4e-21 107.1 320 30.3
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.4e-21 107.1 152 38.2
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.4e-21 106.7 256 32.4
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.5e-21 105.9 173 38.2
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.5e-21 105.9 173 38.2
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.5e-21 105.9 173 38.2
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 7.5e-21 105.9 307 29.0
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.3e-20 105.1 307 29.3
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.7e-20 103.6 297 30.0
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-18 98.6 285 30.5
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-17 94.7 348 28.7
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.3e-16 90.1 132 39.4
vmacro00660 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 5.6e-16 89.7 108 47.2
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-15 87.0 136 36.8
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.6e-15 87.0 68 66.2
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.6e-15 87.0 316 29.1
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-13 81.6 246 31.7
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.0e-13 81.3 334 27.5
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.4e-13 80.1 309 25.9
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.5e-13 79.3 337 26.1
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.3e-12 78.6 303 27.1
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.1e-11 75.5 249 26.9
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.4e-11 74.3 183 30.6
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.2e-11 73.9 322 24.5
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.2e-11 73.9 195 29.2
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-11 73.6 308 26.6
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-11 73.2 390 27.7
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 9.2e-11 72.4 328 24.1
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.6e-10 71.6 269 26.0
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.7e-10 70.9 308 26.3
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 4.6e-10 70.1 134 32.8
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.8e-10 69.3 308 26.0
vmacro22505 Vaccinium macrocarpon HOM05D015585 ORTHO05D015199 7.8e-10 69.3 147 40.1
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.0e-09 68.9 308 26.0
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-09 68.6 308 26.0
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.7e-09 68.2 148 28.4
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.3e-09 67.8 251 24.7
Rhsim11G0004600 Rhododendron simsii HOM05D043423 ORTHO05D000385 2.3e-09 67.8 223 33.6
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.9e-09 67.0 282 25.2
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.9e-09 67.0 308 25.3
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-09 66.6 138 36.2
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.6e-09 65.9 306 25.5
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.1e-08 65.5 241 30.3
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-08 64.7 308 25.6
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-08 64.3 265 29.8
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.3e-08 63.5 306 24.5
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-08 63.2 308 25.3
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-08 63.2 265 28.7
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-07 60.1 308 25.0
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 4.7e-07 60.1 308 23.7
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 8.9e-06 55.8 135 30.4


User provided reference genes

Program Settings