Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04241 Vaccinium macrocarpon HOM05D007418 ORTHO05D009419 0.0e+00 1880.5 990 100.0
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 7.7e-72 276.6 349 50.1
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 1.9e-62 245.4 351 44.4
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 1.3e-50 206.1 323 41.2
HanXRQChr01g0021361 Helianthus annuus HOM05D007418 ORTHO05D009419 6.3e-50 203.8 377 37.9
CAN.G752.2 Capsicum annuum HOM05D007418 ORTHO05D009419 1.2e-48 199.5 341 39.0
GSVIVG01025464001 Vitis vinifera HOM05D007418 ORTHO05D009419 2.7e-48 198.4 340 39.7
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 4.5e-48 197.6 342 38.9
TAR369G1115 Trochodendron aralioides HOM05D007418 ORTHO05D009419 3.8e-47 194.5 355 38.3
Solyc01g044490.4 Solanum lycopersicum HOM05D007418 ORTHO05D009419 8.5e-47 193.4 323 39.0
AUR62019167 Chenopodium quinoa HOM05D007418 ORTHO05D009419 1.5e-46 192.6 318 38.1
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 2.5e-46 191.8 341 37.8
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 4.2e-46 191.0 328 37.2
Sopen01g018620 Solanum pennellii HOM05D007418 ORTHO05D009419 4.2e-46 191.0 323 38.7
Migut.D02561 Erythranthe guttata HOM05D007418 ORTHO05D009419 2.1e-45 188.7 350 36.9
MSTRG.20939 Avicennia marina HOM05D007418 ORTHO05D009419 1.5e-43 182.6 323 36.8
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 2.0e-43 182.2 320 36.2
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 2.6e-43 181.8 320 36.2
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 1.7e-42 179.1 217 46.1
Oeu023704.1 Olea europaea HOM05D007418 ORTHO05D009419 2.2e-42 178.7 236 44.5
ATR0737G157 Amborella trichopoda HOM05D007418 ORTHO05D009419 2.8e-42 178.3 321 37.1
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 4.8e-42 177.6 322 36.3
AUR62040906 Chenopodium quinoa HOM05D007418 ORTHO05D009419 8.3e-42 176.8 236 42.8
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 8.3e-42 176.8 344 33.7
DCAR_025361 Daucus carota HOM05D007418 ORTHO05D009419 1.8e-41 175.6 236 43.2
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 3.1e-41 174.9 365 34.5
Cc01_g00020 Coffea canephora HOM05D007418 ORTHO05D009419 4.1e-41 174.5 234 42.7
Cc01_g03260 Coffea canephora HOM05D007418 ORTHO05D009419 4.1e-41 174.5 234 42.7
MBI04_g37007_MAGBIO Magnolia biondii HOM05D007418 ORTHO05D009419 4.5e-40 171.0 303 37.6
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 7.7e-40 170.2 343 34.1
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 2.9e-39 168.3 322 35.1
Lsat_1_v5_gn_1_67260 Lactuca sativa HOM05D007418 ORTHO05D009419 1.1e-38 166.4 314 37.6
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 1.5e-38 166.0 347 32.6
ClCG03G014480 Citrullus lanatus HOM05D007418 ORTHO05D009419 1.9e-38 165.6 324 36.4
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 7.2e-38 163.7 320 33.4
MELO3C029305.2 Cucumis melo HOM05D007418 ORTHO05D009419 7.2e-38 163.7 324 35.8
Prupe.6G003800 Prunus persica HOM05D007418 ORTHO05D009419 7.2e-38 163.7 326 35.6
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 9.5e-38 163.3 324 34.0
Peaxi162Scf00005g00613 Petunia axillaris HOM05D007418 ORTHO05D009419 1.2e-37 162.9 236 40.7
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 3.6e-37 161.4 345 32.8
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 3.6e-37 161.4 324 34.0
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 6.1e-37 160.6 332 32.8
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 8.0e-37 160.2 325 33.2
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 8.0e-37 160.2 324 33.6
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 1.0e-36 159.8 332 32.8
Rhsim13G0232600 Rhododendron simsii HOM05D007418 ORTHO05D009419 1.4e-36 159.5 131 69.5
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 1.8e-36 159.1 321 32.4
CsaV3_1G041690 Cucumis sativus L. HOM05D007418 ORTHO05D009419 3.0e-36 158.3 324 34.9
CANSAT11G2630 Cannabis sativa HOM05D007418 ORTHO05D009419 4.0e-36 157.9 326 35.0
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 6.8e-36 157.1 325 36.0
unitig_899.g15026 Utricularia gibba HOM05D007418 ORTHO05D009419 1.2e-35 156.4 307 36.2
RcHm_v2.0_Chr5g0083721 Rosa chinensis HOM05D007418 ORTHO05D009419 2.0e-35 155.6 326 34.0
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 2.6e-35 155.2 340 32.1
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 4.4e-35 154.5 320 32.8
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 4.4e-35 154.5 320 32.8
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 9.8e-35 153.3 324 33.6
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 1.3e-34 152.9 318 32.7
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 1.3e-34 152.9 318 32.7
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 1.7e-34 152.5 318 32.1
Gohir.D05G110400 Gossypium hirsutum HOM05D007418 ORTHO05D009419 3.7e-34 151.4 339 32.4
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 8.3e-34 150.2 325 32.0
Mapoly0009s0101 Marchantia polymorpha HOM05D007418 ORTHO05D009419 1.4e-33 149.4 313 33.5
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 5.4e-33 147.5 322 32.6
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 5.4e-33 147.5 323 31.3
Cfa019012 Carpinus fangiana HOM05D000059 ORTHO05D000528 7.0e-33 147.1 339 33.0
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 7.0e-33 147.1 326 32.8
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 1.2e-32 146.4 312 33.0
Glyma.04G122600 Glycine max HOM05D007418 ORTHO05D009419 3.5e-32 144.8 340 31.8
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 5.9e-32 144.1 343 31.5
arahy.Tifrunner.gnm1.ann1.ZH41ZF Arachis hypogaea HOM05D007418 ORTHO05D009419 2.9e-31 141.7 323 31.9
Haze_07392 Corylus avellana HOM05D007418 ORTHO05D009419 3.8e-31 141.4 364 33.5
Lj6g0008878 Lotus japonicus HOM05D007418 ORTHO05D009419 3.8e-31 141.4 338 32.2
Phvul.001G269400 Phaseolus vulgaris HOM05D007418 ORTHO05D009419 1.9e-30 139.0 325 31.1
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 3.3e-30 138.3 334 28.7
CAN.G132.16 Capsicum annuum HOM05D007418 ORTHO05D009419 4.3e-30 137.9 332 33.1
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 9.5e-30 136.7 324 32.1
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 9.5e-30 136.7 324 32.4
Nitab4.5_0004630g0080 Nicotiana tabacum HOM05D007418 ORTHO05D009419 1.2e-29 136.3 187 46.5
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 1.2e-29 136.3 353 30.0
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 1.6e-29 136.0 230 37.0
Ca_16377_v3 Cicer arietinum L. HOM05D007418 ORTHO05D009419 6.1e-29 134.0 350 29.4
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 4.0e-28 131.3 239 34.3
VMungo0464G0510 Vigna mungo HOM05D007418 ORTHO05D009419 4.0e-28 131.3 338 29.0
Atru.chr3.2092 Acer truncatum HOM05D007418 ORTHO05D009419 1.2e-27 129.8 299 31.1
arahy.Tifrunner.gnm1.ann1.WR82LC Arachis hypogaea HOM05D007418 ORTHO05D009419 2.6e-27 128.6 356 28.9
Sc06g0004180 Simmondsia chinensis HOM05D007418 ORTHO05D009419 3.4e-27 128.3 167 44.9
TPR.G19319 Trifolium pratense HOM05D007418 ORTHO05D009419 9.8e-27 126.7 321 29.9
Psat5g101120 Pisum sativum HOM05D007418 ORTHO05D009419 2.2e-26 125.6 321 30.5
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 2.9e-26 125.2 321 30.8
Lalb_Chr11g0075981 Lupinus albus HOM05D007418 ORTHO05D009419 2.4e-25 122.1 314 30.9
Medtr3g083530 Medicago truncatula HOM05D007418 ORTHO05D009419 4.1e-25 121.3 321 29.0
CiPaw.13G176700 Carya illinoinensis HOM05D007418 ORTHO05D009419 5.4e-25 120.9 327 31.5
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 5.4e-25 120.9 323 27.9
SGA_v2.0_scaffold6G03369 Striga asiatica HOM05D007418 ORTHO05D009419 1.6e-24 119.4 305 31.8
Nitab4.5_0004630g0090 Nicotiana tabacum HOM05D007418 ORTHO05D009419 1.3e-23 116.3 80 65.0
Sed0010168 Sechium edule HOM05D007418 ORTHO05D009419 1.3e-23 116.3 287 32.4
Nitab4.5_0002351g0010 Nicotiana tabacum HOM05D007418 ORTHO05D009419 1.7e-23 115.9 187 42.2
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 1.9e-22 112.5 322 28.6
CSS0001325 Camellia sinensis var. sinensis HOM05D007418 ORTHO05D009419 5.0e-15 87.8 50 80.0
QL04p006930 Quercus lobata HOM05D007418 ORTHO05D009419 1.2e-11 76.6 70 55.7
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 5.8e-11 74.3 41 85.4
SHI31291 Sapria himalayana HOM05D007418 ORTHO05D009419 2.9e-10 72.0 141 34.8
MD03G1004200 Malus domestica HOM05D007418 ORTHO05D009419 9.2e-09 67.0 111 32.4
Cre06.g263050 Chlamydomonas reinhardtii HOM05D007418 ORTHO05D009419 7.3e-06 57.4 228 23.7


User provided reference genes

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