Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 1.4e-159 566.2 283 100.0
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 6.7e-138 494.2 264 91.3
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 8.7e-138 493.8 266 91.4
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 1.8e-130 469.5 272 85.3
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 5.9e-126 454.5 268 85.8
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 5.9e-126 454.5 264 83.0
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 2.2e-125 452.6 264 82.6
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 8.5e-125 450.7 266 86.8
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 8.5e-125 450.7 277 79.4
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 1.1e-124 450.3 323 73.4
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 7.2e-124 447.6 264 83.0
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 7.2e-124 447.6 264 83.7
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 2.6e-121 439.1 264 84.1
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 3.3e-121 438.7 277 78.7
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 4.4e-121 438.3 264 81.8
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 7.4e-121 437.6 277 78.3
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 7.4e-121 437.6 264 81.1
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 4.8e-120 434.9 266 80.5
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 8.2e-120 434.1 277 78.7
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 1.1e-119 433.7 265 81.9
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 1.8e-119 433.0 264 81.8
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 4.1e-119 431.8 267 82.4
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 4.1e-119 431.8 266 82.3
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 6.9e-119 431.0 264 81.8
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 9.1e-119 430.6 265 81.5
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 1.5e-118 429.9 264 80.7
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 3.4e-118 428.7 264 80.7
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 3.4e-118 428.7 264 79.9
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 7.7e-118 427.6 264 80.3
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 1.7e-117 426.4 264 79.5
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 2.9e-117 425.6 264 81.4
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 3.8e-117 425.2 261 80.1
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 3.8e-117 425.2 266 78.2
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 5.0e-117 424.9 265 79.2
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 8.5e-117 424.1 264 80.3
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 8.5e-117 424.1 265 79.2
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 1.4e-116 423.3 264 80.7
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 1.9e-116 422.9 266 78.6
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 1.9e-116 422.9 279 77.4
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 1.9e-116 422.9 279 77.4
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 1.9e-116 422.9 264 80.7
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 4.2e-116 421.8 280 78.2
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.6e-115 419.9 264 77.7
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 3.6e-115 418.7 265 79.6
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 2.3e-114 416.0 280 74.6
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 8.8e-114 414.1 264 77.3
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 8.8e-114 414.1 264 75.8
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 8.8e-114 414.1 264 76.5
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 1.1e-113 413.7 266 79.3
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 1.1e-113 413.7 242 82.6
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 1.1e-113 413.7 278 77.7
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 1.5e-113 413.3 269 75.8
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 2.2e-112 409.5 266 75.9
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 4.8e-112 408.3 264 74.6
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 4.8e-112 408.3 264 74.6
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 1.8e-111 406.4 264 74.6
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 2.4e-111 406.0 279 73.8
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 4.1e-111 405.2 265 75.5
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 4.1e-111 405.2 265 77.0
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 4.1e-111 405.2 264 74.2
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 5.3e-111 404.8 264 73.9
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 5.3e-111 404.8 264 73.9
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 2.6e-110 402.5 264 73.9
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.7e-109 399.8 264 72.7
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 4.2e-108 395.2 285 70.5
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 1.6e-107 393.3 266 72.9
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 4.0e-106 388.7 265 75.8
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 6.7e-106 387.9 274 70.8
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 1.5e-105 386.7 264 72.3
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.5e-105 386.7 275 74.9
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 3.7e-104 382.1 264 71.6
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 3.1e-103 379.0 267 70.0
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 5.3e-103 378.3 268 75.0
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 9.1e-103 377.5 264 71.6
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 1.2e-102 377.1 266 70.3
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 4.5e-102 375.2 264 71.2
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 5.9e-102 374.8 264 71.2
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 7.7e-102 374.4 264 71.2
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 7.7e-102 374.4 264 71.2
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 1.0e-101 374.0 264 71.2
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 1.3e-101 373.6 266 69.9
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 5.0e-101 371.7 264 69.7
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 1.1e-100 370.5 265 65.7
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.5e-100 370.2 271 68.6
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 1.5e-100 370.2 264 70.5
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 4.2e-100 368.6 264 67.0
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.4e-98 363.6 265 69.1
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 3.0e-98 362.5 266 67.7
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 3.0e-98 362.5 248 71.4
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 1.5e-97 360.1 264 68.9
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 4.4e-97 358.6 263 69.2
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 5.7e-97 358.2 268 68.3
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 2.8e-96 355.9 268 67.5
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 2.8e-96 355.9 203 82.8
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 3.1e-95 352.4 264 68.9
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 2.0e-94 349.7 264 68.6
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 2.3e-90 336.3 272 66.2
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 9.2e-87 324.3 263 64.6
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 6.8e-82 308.1 265 60.4
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 6.0e-78 295.0 279 62.7
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 3.6e-75 285.8 162 85.2
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 3.4e-49 199.5 223 53.8
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 6.4e-48 195.3 140 67.9
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 2.7e-46 189.9 211 51.2
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 4.5e-41 172.6 269 38.7
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 6.4e-40 168.7 262 42.0
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 9.3e-39 164.9 258 37.6
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.6e-38 164.1 243 43.6
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.3e-37 160.2 262 38.2
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 4.3e-36 156.0 272 33.8
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 4.3e-36 156.0 255 35.3
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 5.6e-36 155.6 122 65.6
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 8.2e-27 125.2 226 37.6
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 1.1e-26 124.8 147 47.6
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 3.1e-26 123.2 78 74.4
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 2.0e-12 77.4 44 81.8


User provided reference genes

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