Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 8.7e-271 936.4 485 100.0
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 4.7e-123 445.7 435 62.1
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 2.8e-112 409.8 426 57.3
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 1.5e-84 317.8 432 46.3
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 4.4e-81 306.2 417 46.3
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 6.6e-77 292.4 403 45.2
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 7.3e-68 262.3 467 39.8
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 1.4e-66 258.1 405 42.2
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 6.9e-66 255.8 381 43.6
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 1.9e-63 247.7 403 40.7
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 7.1e-63 245.7 417 40.5
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 7.3e-60 235.7 422 40.0
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 4.5e-57 226.5 408 39.0
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 1.3e-56 224.9 403 37.0
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 3.8e-56 223.4 404 38.1
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 2.5e-52 210.7 403 37.7
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 4.3e-52 209.9 403 37.2
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 9.6e-52 208.8 380 35.8
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 2.8e-51 207.2 408 37.0
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 2.4e-50 204.1 414 37.9
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 5.3e-50 203.0 408 36.5
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.0e-49 201.1 213 54.0
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 5.8e-49 199.5 410 34.9
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 7.6e-49 199.1 401 34.4
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 6.4e-48 196.1 402 35.1
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 2.5e-47 194.1 409 34.0
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 4.2e-47 193.4 404 35.1
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 7.1e-47 192.6 404 35.9
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.8e-45 188.0 415 34.2
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 5.1e-45 186.4 405 35.6
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 8.7e-45 185.7 409 33.0
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.1e-44 185.3 409 33.3
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 1.5e-44 184.9 405 34.1
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 1.5e-44 184.9 409 33.3
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.5e-44 184.9 409 33.3
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 9.6e-44 182.2 404 33.7
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.3e-43 181.8 215 51.6
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 4.8e-43 179.9 406 35.0
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 6.2e-43 179.5 404 31.9
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 6.2e-43 179.5 402 32.6
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 8.2e-43 179.1 405 34.1
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 1.4e-42 178.3 418 35.2
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.0e-42 176.8 405 33.6
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 4.0e-42 176.8 407 35.6
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 5.3e-42 176.4 405 33.8
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 6.9e-42 176.0 405 33.8
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 1.2e-41 175.3 407 35.1
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 2.6e-41 174.1 445 31.0
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 3.8e-40 170.2 403 33.7
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 4.9e-40 169.9 409 32.0
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 1.1e-39 168.7 402 32.3
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 1.4e-39 168.3 213 45.1
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 2.5e-39 167.5 375 32.8
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 2.5e-39 167.5 409 32.3
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 4.2e-39 166.8 409 32.8
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 1.6e-38 164.9 409 31.1
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 3.5e-38 163.7 374 32.1
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 3.5e-38 163.7 428 32.2
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 4.6e-38 163.3 415 32.5
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 6.0e-38 162.9 425 30.8
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 6.0e-38 162.9 405 30.9
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 1.8e-37 161.4 405 31.1
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 1.9e-36 157.9 373 32.4
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.9e-36 157.9 402 32.8
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 2.5e-36 157.5 410 31.2
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 9.7e-36 155.6 402 31.3
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 1.3e-35 155.2 402 30.8
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 2.2e-35 154.5 402 31.3
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 2.8e-35 154.1 412 30.6
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 3.7e-35 153.7 402 30.6
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 6.3e-35 152.9 406 30.3
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 6.3e-35 152.9 403 30.0
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 1.8e-34 151.4 386 31.1
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 1.8e-34 151.4 403 29.8
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 1.2e-33 148.7 405 31.1
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 1.5e-33 148.3 403 29.5
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 2.0e-33 147.9 408 29.9
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.5e-33 146.7 409 30.3
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 5.9e-33 146.4 403 29.8
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 7.7e-33 146.0 402 30.6
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 7.7e-33 146.0 402 30.3
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 2.9e-32 144.1 403 29.5
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 6.5e-32 142.9 213 41.8
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 1.4e-31 141.7 403 27.8
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 2.5e-31 141.0 402 29.1
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 3.2e-31 140.6 409 29.6
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 4.2e-31 140.2 403 29.8
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 2.1e-30 137.9 403 28.8
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 2.7e-30 137.5 408 29.4
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 3.6e-30 137.1 406 29.6
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 3.6e-30 137.1 402 30.8
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 4.6e-30 136.7 406 29.6
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 2.3e-29 134.4 406 30.3
TAR623G1702 Trochodendron aralioides HOM05D001447 ORTHO05D005923 8.8e-29 132.5 325 35.1
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 1.1e-28 132.1 407 28.3
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 2.5e-28 131.0 417 26.9
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 4.3e-28 130.2 401 28.4
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 4.3e-28 130.2 215 42.3
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 7.4e-28 129.4 429 30.3
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 1.7e-27 128.3 403 29.0
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 2.2e-27 127.9 407 29.5
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 3.1e-26 124.0 438 27.9
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 6.9e-26 122.9 221 40.3
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 1.2e-25 122.1 98 59.2
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 3.4e-25 120.6 404 30.2
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 7.7e-25 119.4 209 42.6
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 1.3e-24 118.6 430 28.1
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 1.9e-23 114.8 404 29.2
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 1.9e-23 114.8 98 54.1
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 3.2e-23 114.0 407 29.0
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 4.2e-23 113.6 412 28.6
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 1.2e-22 112.1 402 27.9
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 1.2e-22 112.1 402 27.9
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 7.9e-22 109.4 404 28.5
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 3.9e-21 107.1 402 26.6
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 2.6e-20 104.4 125 45.6
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 9.7e-20 102.4 418 25.4
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 3.7e-19 100.5 210 36.7
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 6.3e-19 99.8 419 26.3
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 4.1e-18 97.1 116 45.7
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 5.9e-17 93.2 107 43.9
HanXRQChr04g0117031 Helianthus annuus HOM05D001447 ORTHO05D005923 1.2e-14 85.5 98 49.0
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 1.2e-14 85.5 126 44.4
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 2.1e-14 84.7 92 47.8
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 6.1e-14 83.2 95 49.5
Ca_07826_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005923 1.4e-13 82.0 332 25.0
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 2.3e-13 81.3 154 32.5
QL01p018054 Quercus lobata HOM05D001447 ORTHO05D005923 2.6e-12 77.8 79 53.2
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 1.3e-11 75.5 223 32.7
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.7e-11 75.1 55 67.3
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 3.7e-11 73.9 131 35.1
Aa31LG7G13510 Aethionema arabicum HOM05D001447 ORTHO05D005923 1.4e-10 72.0 93 45.2
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 2.4e-10 71.2 109 33.9
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 7.0e-10 69.7 93 46.2
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 2.0e-09 68.2 97 38.1
BcaB06g26464 Brassica carinata HOM05D001447 ORTHO05D005923 8.5e-08 62.8 92 43.5
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 7.2e-07 59.7 131 31.3
RcHm_v2.0_Chr1g0370741 Rosa chinensis HOM05D023747 ORTHO05D025522 9.4e-07 59.3 68 42.6
VMungo1383G1695 Vigna mungo HOM05D001447 ORTHO05D005923 1.6e-06 58.5 97 33.0
FvH4_7g24870 Fragaria vesca HOM05D021264 ORTHO05D022594 2.1e-06 58.2 72 44.4
Mapoly0019s0119 Marchantia polymorpha HOM05D001447 ORTHO05D005923 3.6e-06 57.4 112 32.1


User provided reference genes

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