Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04092 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.8e-114 416.0 220 100.0
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 3.7e-43 179.1 158 65.2
vmacro01527 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.8e-42 176.8 176 59.7
vmacro13143 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 2.5e-39 166.4 135 69.6
Rhsim08G0058700 Rhododendron simsii HOM05D000539 ORTHO05D000592 7.8e-17 91.7 66 65.2
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-15 85.5 180 32.2
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 9.5e-15 84.7 180 33.9
Rhsim08G0058500 Rhododendron simsii HOM05D000539 ORTHO05D000592 4.0e-13 79.3 51 70.6
vmacro16790 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 2.4e-10 70.1 35 88.6
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 3.2e-10 69.7 101 34.7
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-09 67.8 169 28.4
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-09 67.8 169 28.4
Rhsim03G0043700 Rhododendron simsii HOM05D000539 ORTHO05D000592 3.5e-09 66.2 141 35.5
Ciclev10033503m.g Citrus clementina HOM05D000539 ORTHO05D000592 2.5e-07 60.1 86 34.9
Ciclev10012877m.g Citrus clementina HOM05D000539 ORTHO05D000592 4.3e-07 59.3 73 37.0
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.3e-07 59.3 70 45.7
Ciclev10005682m.g Citrus clementina HOM05D000539 ORTHO05D000592 5.6e-07 58.9 73 37.0
SHI11655 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-06 57.4 103 32.0
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.1e-06 57.0 195 31.8
Ciclev10017703m.g Citrus clementina HOM05D000539 ORTHO05D000592 2.8e-06 56.6 78 34.6
Atru.chr1.738 Acer truncatum HOM05D000539 ORTHO05D000592 4.7e-06 55.8 65 43.1
Atru.chr2.3648 Acer truncatum HOM05D000539 ORTHO05D000592 6.2e-06 55.5 65 41.5
Rhsim01G0080200 Rhododendron simsii HOM05D000539 ORTHO05D000592 6.2e-06 55.5 128 32.0
SalBow7G1279 Salvia bowleyana HOM05D000539 ORTHO05D000592 8.1e-06 55.1 50 50.0


User provided reference genes

Program Settings