Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04083 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 4.1e-91 338.2 187 100.0
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 3.3e-61 238.8 159 81.1
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 2.5e-56 222.6 161 78.9
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 9.4e-56 220.7 161 77.6
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 2.3e-54 216.1 161 75.8
Hma1.2p1_0460F.1_g157660 Hydrangea macrophylla HOM05D004500 ORTHO05D005775 2.6e-53 212.6 161 73.9
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 1.6e-50 203.4 188 62.8
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 1.6e-50 203.4 176 65.9
COL.COLO4_06618 Corchorus olitorius HOM05D004500 ORTHO05D005775 3.5e-50 202.2 161 70.2
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 1.0e-49 200.7 161 70.8
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 1.3e-49 200.3 188 62.2
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 6.5e-49 198.0 145 72.4
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 6.5e-49 198.0 162 67.3
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 8.5e-49 197.6 148 70.9
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 1.1e-48 197.2 145 71.0
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.9e-48 196.4 188 60.1
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 1.9e-48 196.4 188 60.1
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 1.9e-48 196.4 147 68.7
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 2.5e-48 196.1 159 67.3
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 2.5e-48 196.1 171 65.5
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 4.2e-48 195.3 147 69.4
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 5.5e-48 194.9 176 61.9
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 5.5e-48 194.9 172 62.8
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 5.5e-48 194.9 145 69.0
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 5.5e-48 194.9 145 73.1
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 7.2e-48 194.5 145 72.4
Solyc11g062320.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 9.4e-48 194.1 145 69.0
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 1.6e-47 193.4 161 68.3
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 2.1e-47 193.0 171 62.0
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 2.1e-47 193.0 172 62.2
VMungo0647G1179 Vigna mungo HOM05D004500 ORTHO05D005775 2.7e-47 192.6 145 71.0
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 3.6e-47 192.2 148 70.3
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 3.6e-47 192.2 148 70.3
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 3.6e-47 192.2 152 66.4
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 3.6e-47 192.2 144 72.2
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 4.7e-47 191.8 175 61.7
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 4.7e-47 191.8 145 71.7
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 6.1e-47 191.4 161 69.6
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 6.1e-47 191.4 145 68.3
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 8.0e-47 191.0 172 61.6
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 1.0e-46 190.7 166 63.9
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 1.0e-46 190.7 161 62.1
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 1.0e-46 190.7 145 72.4
Nitab4.5_0002026g0160 Nicotiana tabacum HOM05D004500 ORTHO05D005775 1.0e-46 190.7 148 66.9
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 1.0e-46 190.7 148 70.3
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 1.0e-46 190.7 147 67.3
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 1.4e-46 190.3 166 63.9
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 1.4e-46 190.3 172 60.5
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 1.8e-46 189.9 161 67.7
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 2.3e-46 189.5 148 66.9
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 4.0e-46 188.7 172 62.2
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 8.8e-46 187.6 145 65.5
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 2.0e-45 186.4 161 63.4
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 2.0e-45 186.4 161 63.4
Peaxi162Scf00029g02523 Petunia axillaris HOM05D004500 ORTHO05D005775 2.0e-45 186.4 145 67.6
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 2.6e-45 186.0 147 67.3
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 3.4e-45 185.7 141 67.4
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 3.4e-45 185.7 172 61.0
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 4.4e-45 185.3 166 63.9
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 3.7e-44 182.2 148 66.9
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 4.9e-44 181.8 157 65.0
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 6.3e-44 181.4 157 64.3
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 6.3e-44 181.4 147 66.0
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 6.3e-44 181.4 147 66.0
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 6.3e-44 181.4 147 66.0
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 6.3e-44 181.4 147 66.7
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 6.3e-44 181.4 147 64.6
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 8.3e-44 181.0 146 68.5
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 8.3e-44 181.0 152 61.2
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 1.8e-43 179.9 145 65.5
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 3.1e-43 179.1 144 65.3
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 3.1e-43 179.1 144 65.3
FAN21G2043 Fragaria x ananassa HOM05D004500 ORTHO05D005775 3.1e-43 179.1 147 65.3
Haze_23272 Corylus avellana HOM05D004500 ORTHO05D005775 7.0e-43 177.9 163 63.8
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 9.1e-43 177.6 145 64.8
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 1.2e-42 177.2 174 59.2
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 1.2e-42 177.2 146 66.4
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 2.7e-42 176.0 148 65.5
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 2.7e-42 176.0 148 65.5
BcaC01g01445 Brassica carinata HOM05D004500 ORTHO05D005775 7.7e-42 174.5 147 65.3
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 1.0e-41 174.1 145 64.8
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 2.3e-41 172.9 178 56.7
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 5.0e-41 171.8 146 65.8
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 3.3e-40 169.1 173 56.6
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 3.6e-39 165.6 147 61.9
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 1.0e-38 164.1 144 59.7
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 1.4e-38 163.7 147 60.5
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 4.4e-37 158.7 145 53.1
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 1.4e-35 153.7 160 52.5
PSO339G2400 Papaver somniferum HOM05D004500 ORTHO05D005775 1.3e-33 147.1 107 70.1
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 2.3e-33 146.4 141 56.0
SEGI_37322 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.1e-32 144.1 147 53.7
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 2.5e-32 142.9 144 53.5
EL10Ac5g11937 Beta vulgaris HOM05D004500 ORTHO05D005775 1.8e-30 136.7 152 52.0
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 5.8e-29 131.7 135 53.3
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 1.1e-27 127.5 140 50.0
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 2.3e-25 119.8 138 48.6
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 5.6e-24 115.2 146 45.9
Thhalv10012226m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 2.1e-23 113.2 159 46.5
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 2.1e-23 113.2 145 44.8
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 4.9e-20 102.1 139 46.0
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 1.1e-19 100.9 145 42.8
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 6.0e-18 95.1 137 43.8
HPP92_022828 Vanilla planifolia HOM05D004500 ORTHO05D005775 1.9e-16 90.1 74 64.9
SEGI_00784 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 5.6e-16 88.6 92 50.0
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 4.0e-14 82.4 160 33.1
EL10Ac5g12062 Beta vulgaris HOM05D004500 ORTHO05D005775 6.0e-10 68.6 70 51.4
MD12G1083300 Malus domestica HOM05D004500 ORTHO05D005775 2.3e-09 66.6 66 59.1
TPR.G24491 Trifolium pratense HOM05D003400 ORTHO05D003687 2.4e-06 56.6 86 43.0


User provided reference genes

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