Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04048 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 5.6e-101 370.9 185 100.0
Rhsim13G0206100 Rhododendron simsii HOM05D002956 ORTHO05D008031 2.2e-36 156.4 105 80.0
Actinidia06980 Actinidia chinensis HOM05D002956 ORTHO05D008031 3.6e-31 139.0 96 76.0
Dinv36148 Davidia involucrata HOM05D002956 ORTHO05D008031 1.4e-30 137.1 91 76.9
CSS0006448 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D008031 2.0e-29 133.3 101 71.3
Atru.chr3.3008 Acer truncatum HOM05D002956 ORTHO05D008031 2.6e-29 132.9 91 72.5
Nn7g36838 Nelumbo nucifera HOM05D002956 ORTHO05D008031 3.3e-29 132.5 89 75.3
Cpa.g.sc34.183 Carica papaya HOM05D002956 ORTHO05D008031 4.4e-29 132.1 91 74.7
AUR62000217 Chenopodium quinoa HOM05D002956 ORTHO05D008031 5.7e-29 131.7 95 71.6
RcHm_v2.0_Chr5g0050251 Rosa chinensis HOM05D002956 ORTHO05D008031 5.7e-29 131.7 91 74.7
Sc06g0004740 Simmondsia chinensis HOM05D002956 ORTHO05D008031 9.7e-29 131.0 91 74.7
Aqoxy2G00442 Aquilegia oxysepala HOM05D002956 ORTHO05D008031 2.2e-28 129.8 94 69.1
AUR62006562 Chenopodium quinoa HOM05D002956 ORTHO05D008031 2.2e-28 129.8 95 70.5
Thhalv10002083m.g Eutrema salsugineum HOM05D002956 ORTHO05D008031 2.2e-28 129.8 90 72.2
QL01p016670 Quercus lobata HOM05D002956 ORTHO05D008031 2.8e-28 129.4 91 72.5
Hund07424 Selenicereus undatus HOM05D002956 ORTHO05D008031 2.8e-28 129.4 90 73.3
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 3.7e-28 129.0 97 67.0
FAN21G3062 Fragaria x ananassa HOM05D002956 ORTHO05D008031 3.7e-28 129.0 102 67.6
Sp4g08660 Schrenkiella parvula HOM05D002956 ORTHO05D008031 3.7e-28 129.0 90 71.1
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 4.8e-28 128.6 94 70.2
Ciclev10018203m.g Citrus clementina HOM05D002956 ORTHO05D008031 6.3e-28 128.3 91 69.2
COL.COLO4_07384 Corchorus olitorius HOM05D002956 ORTHO05D008031 6.3e-28 128.3 91 72.5
Haze_23261 Corylus avellana HOM05D002956 ORTHO05D008031 6.3e-28 128.3 95 69.5
Sabra09G0051500 Salix brachista HOM05D002956 ORTHO05D008031 6.3e-28 128.3 91 70.3
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 8.2e-28 127.9 91 69.2
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 8.2e-28 127.9 91 69.2
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 8.2e-28 127.9 91 69.2
Prupe.4G260400 Prunus persica HOM05D002956 ORTHO05D008031 8.2e-28 127.9 91 71.4
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 8.2e-28 127.9 90 71.1
TAR369G0726 Trochodendron aralioides HOM05D002956 ORTHO05D008031 8.2e-28 127.9 90 71.1
DCAR_006894 Daucus carota HOM05D002956 ORTHO05D008031 1.8e-27 126.7 90 73.3
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 1.8e-27 126.7 91 71.4
THA.LOC104826460 Tarenaya hassleriana HOM05D002956 ORTHO05D008031 1.8e-27 126.7 92 70.7
GSVIVG01037341001 Vitis vinifera HOM05D002956 ORTHO05D008031 2.4e-27 126.3 88 73.9
Cc01_g06320 Coffea canephora HOM05D002956 ORTHO05D008031 5.3e-27 125.2 90 70.0
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 5.3e-27 125.2 98 68.4
FAN16G1792 Fragaria x ananassa HOM05D002956 ORTHO05D008031 5.3e-27 125.2 90 72.2
Sed0014482 Sechium edule HOM05D002956 ORTHO05D008031 5.3e-27 125.2 91 69.2
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 7.0e-27 124.8 91 72.5
CiPaw.14G111000 Carya illinoinensis HOM05D002956 ORTHO05D008031 1.6e-26 123.6 91 69.2
Sopen11g024800 Solanum pennellii HOM05D002956 ORTHO05D008031 1.6e-26 123.6 91 68.1
PGSC0003DMG400031243 Solanum tuberosum HOM05D002956 ORTHO05D008031 1.6e-26 123.6 91 68.1
AT2G26810 Arabidopsis thaliana HOM05D002956 ORTHO05D008031 2.0e-26 123.2 93 68.8
Oeu061696.1 Olea europaea HOM05D002956 ORTHO05D008031 2.0e-26 123.2 105 62.9
PSO339G2954 Papaver somniferum HOM05D002956 ORTHO05D008031 2.0e-26 123.2 91 68.1
Eucgr.J00675 Eucalyptus grandis HOM05D002956 ORTHO05D008031 2.6e-26 122.9 91 70.3
FAN11G2127 Fragaria x ananassa HOM05D002956 ORTHO05D008031 2.6e-26 122.9 101 66.3
Potri.009G068400 Populus trichocarpa HOM05D002956 ORTHO05D008031 2.6e-26 122.9 91 67.0
Zm00001eb329010 Zea mays HOM05D002956 ORTHO05D008031 2.6e-26 122.9 91 63.7
ATR0307G044 Amborella trichopoda HOM05D002956 ORTHO05D008031 3.5e-26 122.5 89 67.4
MBI19_g19211_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D008031 4.5e-26 122.1 90 67.8
arahy.Tifrunner.gnm1.ann1.XLU01S Arachis hypogaea HOM05D002956 ORTHO05D008031 5.9e-26 121.7 91 67.0
Lj6g0022582 Lotus japonicus HOM05D002956 ORTHO05D008031 5.9e-26 121.7 91 67.0
HPP92_001025 Vanilla planifolia HOM05D002956 ORTHO05D008031 7.7e-26 121.3 93 65.6
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 1.0e-25 120.9 91 70.3
Gorai.001G135400 Gossypium raimondii HOM05D002956 ORTHO05D008031 1.0e-25 120.9 91 70.3
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 1.3e-25 120.6 86 68.6
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.3e-25 120.6 86 68.6
Thecc.09G246000 Theobroma cacao HOM05D002956 ORTHO05D008031 1.3e-25 120.6 86 70.9
MELO3C014548.2 Cucumis melo HOM05D002956 ORTHO05D008031 2.2e-25 119.8 91 64.8
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 2.2e-25 119.8 91 65.9
ClCG02G022710 Citrullus lanatus HOM05D002956 ORTHO05D008031 3.8e-25 119.0 91 64.8
HanXRQChr12g0380421 Helianthus annuus HOM05D002956 ORTHO05D008031 5.0e-25 118.6 94 62.8
AL4G20000 Arabidopsis lyrata HOM05D002956 ORTHO05D008031 8.5e-25 117.9 100 62.0
Medtr3g045720 Medicago truncatula HOM05D002956 ORTHO05D008031 1.9e-24 116.7 107 59.8
Carub.0004s0727 Capsella rubella HOM05D002956 ORTHO05D008031 2.5e-24 116.3 102 60.8
Migut.N02382 Erythranthe guttata HOM05D002956 ORTHO05D008031 2.5e-24 116.3 98 66.3
MD00G1134600 Malus domestica HOM05D002956 ORTHO05D008031 3.2e-24 115.9 84 70.2
MSTRG.12436 Avicennia marina HOM05D002956 ORTHO05D008031 4.2e-24 115.5 90 65.6
CANSAT54G1478 Cannabis sativa HOM05D002956 ORTHO05D008031 5.5e-24 115.2 87 66.7
Ca_25980_v3 Cicer arietinum L. HOM05D002956 ORTHO05D008031 7.2e-24 114.8 89 65.2
Lalb_Chr15g0078511 Lupinus albus HOM05D002956 ORTHO05D008031 7.2e-24 114.8 84 70.2
Glyma.08G154800 Glycine max HOM05D002956 ORTHO05D008031 9.4e-24 114.4 91 63.7
Psat5g191880 Pisum sativum HOM05D002956 ORTHO05D008031 9.4e-24 114.4 92 63.0
CDE04G0360 Ceratophyllum demersum HOM05D002956 ORTHO05D008031 2.7e-23 112.8 90 65.6
Phvul.005G020600 Phaseolus vulgaris HOM05D002956 ORTHO05D008031 2.7e-23 112.8 91 62.6
Os07g0641600 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D008031 4.7e-23 112.1 84 64.3
Duzib150G0193 Durio zibethinus HOM05D002956 ORTHO05D008031 1.0e-22 110.9 91 67.0
ECA233G6038 Erigeron canadensis HOM05D002956 ORTHO05D008031 1.4e-22 110.5 89 65.2
SEGI_15484 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 2.3e-22 109.8 91 61.5
SEGI_28475 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 2.3e-22 109.8 91 61.5
SGA_v2.0_scaffold26G11398 Striga asiatica HOM05D002956 ORTHO05D008031 8.8e-22 107.8 103 58.3
EL10Ac4g10091 Beta vulgaris HOM05D002956 ORTHO05D008031 3.3e-21 105.9 91 62.6
Aa31LG5G8970 Aethionema arabicum HOM05D002956 ORTHO05D008031 4.4e-21 105.5 90 63.3
arahy.Tifrunner.gnm1.ann1.1Z9FJQ Arachis hypogaea HOM05D002956 ORTHO05D008031 1.8e-19 100.1 91 59.3
Lsat_1_v5_gn_5_63100 Lactuca sativa HOM05D002956 ORTHO05D008031 7.0e-19 98.2 133 45.1
PGR119G0612 Punica granatum HOM05D002956 ORTHO05D008031 7.0e-19 98.2 119 48.7
Psat4g060320 Pisum sativum HOM05D002956 ORTHO05D008031 3.5e-18 95.9 79 63.3
Nitab4.5_0004018g0060 Nicotiana tabacum HOM05D002956 ORTHO05D008031 1.3e-17 94.0 114 48.2
PSO384G3941 Papaver somniferum HOM05D002956 ORTHO05D008031 1.9e-16 90.1 91 57.1
VMungo1080G1429 Vigna mungo HOM05D002956 ORTHO05D008031 1.9e-16 90.1 94 53.2
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 4.2e-16 89.0 89 50.6
AagrBONN_evm.TU.Sc2ySwM_228.3973 Anthoceros agrestis HOM05D002956 ORTHO05D008031 8.8e-14 81.3 93 47.3
Ah.06g194770 Amaranthus hybridus HOM05D002956 ORTHO05D008031 1.5e-13 80.5 92 48.9
Nitab4.5_0007012g0050 Nicotiana tabacum HOM05D002956 ORTHO05D008031 4.4e-13 79.0 63 66.7
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 7.5e-13 78.2 105 41.9
CBR_g39846 Chara braunii HOM05D002956 ORTHO05D008031 3.1e-11 72.8 90 41.1
CAN.G468.2 Capsicum annuum HOM05D002956 ORTHO05D008031 5.0e-09 65.5 45 64.4


User provided reference genes

Program Settings