Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03792 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.9e-63 246.5 216 100.0
vmacro03790 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 4.3e-36 155.6 206 48.1
vmacro03794 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.1e-34 149.4 188 91.0
vmacro03798 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.5e-25 120.6 196 80.1
vmacro03797 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 7.6e-25 118.2 197 78.7
vmacro03799 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.0e-21 106.3 206 73.3
CSS0011346 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.2e-15 86.3 76 61.8
Actinidia29315 Actinidia chinensis HOM05D000448 ORTHO05D000291 5.5e-15 85.5 196 71.9
vmacro03793 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.3e-13 80.9 152 67.8
vmacro01113 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 7.4e-12 75.1 76 53.9
Actinidia03310 Actinidia chinensis HOM05D000448 ORTHO05D000291 2.4e-10 70.1 78 52.6
CSS0050228 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.1e-10 69.7 197 29.9
Eucgr.L00453 Eucalyptus grandis HOM05D000448 ORTHO05D000291 9.0e-10 68.2 195 64.1
Lj1P661T8 Lonicera japonica HOM05D000448 ORTHO05D000291 9.0e-10 68.2 74 50.0
Eucgr.C00683 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.0e-09 67.0 190 54.7
CSS0031680 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.6e-09 66.6 197 48.2
vmacro03791 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 2.6e-09 66.6 152 63.2
MSTRG.12045 Avicennia marina HOM05D000448 ORTHO05D000291 3.4e-09 66.2 74 47.3
Prupe.7G203800 Prunus persica HOM05D000448 ORTHO05D000291 3.4e-09 66.2 71 46.5
vmacro03789 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.4e-09 66.2 152 72.4
Lj1A658G6 Lonicera japonica HOM05D000448 ORTHO05D000291 4.5e-09 65.9 74 47.3
Sopen08g017860 Solanum pennellii HOM05D000448 ORTHO05D000291 4.5e-09 65.9 197 61.9
COL.COLO4_35169 Corchorus olitorius HOM05D000448 ORTHO05D000291 5.9e-09 65.5 191 57.6
Lsat_1_v5_gn_5_30600 Lactuca sativa HOM05D000448 ORTHO05D000291 1.0e-08 64.7 73 45.2
Lj1A655T54 Lonicera japonica HOM05D000448 ORTHO05D000291 1.0e-08 64.7 74 47.3
Nn4g25436 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.0e-08 64.7 69 49.3
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.3e-08 64.3 70 45.7
CSS0044549 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.7e-08 63.9 75 50.7
Eucgr.E02801 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.7e-08 63.9 205 53.2
Lsat_1_v5_gn_5_29481 Lactuca sativa HOM05D000448 ORTHO05D000291 1.7e-08 63.9 75 42.7
Lj1A658T5 Lonicera japonica HOM05D000448 ORTHO05D000291 2.2e-08 63.5 69 49.3
CSS0013072 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.8e-08 62.8 74 47.3
CSS0025223 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.8e-08 62.8 75 50.7
CSS0045842 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.8e-08 62.8 74 47.3
Thecc.09G133100 Theobroma cacao HOM05D000448 ORTHO05D000291 3.8e-08 62.8 198 53.5
Duzib150G0219 Durio zibethinus HOM05D000448 ORTHO05D000291 5.0e-08 62.4 199 61.8
Eucgr.C00680 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.0e-08 62.4 190 53.2
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 5.0e-08 62.4 77 45.5
Solyc08g062330.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 5.0e-08 62.4 75 44.0
Atru.chr2.622 Acer truncatum HOM05D000448 ORTHO05D000291 6.5e-08 62.0 200 51.5
Atru.chr7.1898 Acer truncatum HOM05D000448 ORTHO05D000291 8.5e-08 61.6 74 45.9
Rhsim03G0059800 Rhododendron simsii HOM05D000448 ORTHO05D000291 8.5e-08 61.6 74 44.6
Eucgr.C00697 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.1e-07 61.2 71 47.9
Oeu010820.1 Olea europaea HOM05D000448 ORTHO05D000291 1.1e-07 61.2 70 47.1
Thecc.09G132900 Theobroma cacao HOM05D000448 ORTHO05D000291 1.1e-07 61.2 190 54.2
Actinidia38444 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.4e-07 60.8 73 43.8
EL10Ac2g04009 Beta vulgaris HOM05D000448 ORTHO05D000291 1.4e-07 60.8 74 45.9
CSS0002364 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.4e-07 60.8 73 47.9
CSS0023530 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.4e-07 60.8 73 47.9
CiPaw.03G112000 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.4e-07 60.8 183 52.5
Ciclev10008188m.g Citrus clementina HOM05D000448 ORTHO05D000291 1.4e-07 60.8 75 44.0
Eucgr.B00705 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.4e-07 60.8 72 48.6
MSTRG.12047 Avicennia marina HOM05D000448 ORTHO05D000291 1.9e-07 60.5 74 43.2
EL10Ac2g04012 Beta vulgaris HOM05D000448 ORTHO05D000291 1.9e-07 60.5 74 45.9
Cc06_g19860 Coffea canephora HOM05D000448 ORTHO05D000291 1.9e-07 60.5 64 45.3
Duzib168G2346 Durio zibethinus HOM05D000448 ORTHO05D000291 1.9e-07 60.5 74 44.6
Nn1g04197 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.9e-07 60.5 69 46.4
Nn8g41108 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.9e-07 60.5 69 46.4
Eucgr.E02805 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.5e-07 60.1 71 46.5
Duzib168G2236 Durio zibethinus HOM05D000448 ORTHO05D000291 3.2e-07 59.7 74 44.6
Eucgr.L00452 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.2e-07 59.7 195 51.3
Lsat_1_v5_gn_5_29501 Lactuca sativa HOM05D000448 ORTHO05D000291 3.2e-07 59.7 70 42.9
Peaxi162Scf00565g00827 Petunia axillaris HOM05D000448 ORTHO05D000291 3.2e-07 59.7 75 42.7
Actinidia25224 Actinidia chinensis HOM05D000448 ORTHO05D000291 4.2e-07 59.3 73 45.2
CSS0028482 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 4.2e-07 59.3 70 50.0
AUR62009865 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.2e-07 59.3 70 45.7
Cc00_g19340 Coffea canephora HOM05D000448 ORTHO05D000291 4.2e-07 59.3 70 48.6
COL.COLO4_35167 Corchorus olitorius HOM05D000448 ORTHO05D000291 4.2e-07 59.3 74 41.9
Duzib168G2221 Durio zibethinus HOM05D000448 ORTHO05D000291 4.2e-07 59.3 74 44.6
Lj1P659T5 Lonicera japonica HOM05D000448 ORTHO05D000291 4.2e-07 59.3 65 49.2
QL02p061382 Quercus lobata HOM05D000448 ORTHO05D000291 4.2e-07 59.3 197 62.4
Rhsim03G0060400 Rhododendron simsii HOM05D000448 ORTHO05D000291 4.2e-07 59.3 68 48.5
Rhsim03G0060700 Rhododendron simsii HOM05D000448 ORTHO05D000291 4.2e-07 59.3 68 48.5
RhsimUnG0057600 Rhododendron simsii HOM05D000448 ORTHO05D000291 4.2e-07 59.3 68 48.5
RhsimUnG0057700 Rhododendron simsii HOM05D000448 ORTHO05D000291 4.2e-07 59.3 68 45.6
Duzib150G0465 Durio zibethinus HOM05D000448 ORTHO05D000291 5.5e-07 58.9 69 44.9
ECA248G3007 Erigeron canadensis HOM05D000448 ORTHO05D000291 5.5e-07 58.9 69 44.9
Eucgr.C03618 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.5e-07 58.9 200 60.5
Eucgr.E02804 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.5e-07 58.9 71 45.1
GSVIVG01015141001 Vitis vinifera HOM05D000448 ORTHO05D000291 5.5e-07 58.9 73 46.6
CiPaw.03G112300 Carya illinoinensis HOM05D000448 ORTHO05D000291 7.2e-07 58.5 183 50.8
ECA248G1701 Erigeron canadensis HOM05D000448 ORTHO05D000291 9.3e-07 58.2 69 46.4
FAN23G0378 Fragaria x ananassa HOM05D000544 ORTHO05D000291 9.3e-07 58.2 71 42.3
FAN28G0857 Fragaria x ananassa HOM05D000448 ORTHO05D000291 9.3e-07 58.2 71 42.3
PGR044G1390 Punica granatum HOM05D000448 ORTHO05D000291 9.3e-07 58.2 196 55.6
Rhsim03G0061000 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.3e-07 58.2 68 45.6
RhsimUnG0112900 Rhododendron simsii HOM05D003997 ORTHO05D002698 9.3e-07 58.2 68 47.1
AUR62001505 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.2e-06 57.8 70 45.7
Ciclev10009252m.g Citrus clementina HOM05D000448 ORTHO05D000291 1.2e-06 57.8 75 42.7
Duzib150G1064 Durio zibethinus HOM05D000448 ORTHO05D000291 1.2e-06 57.8 69 44.9
Eucgr.L00448 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-06 57.8 195 35.9
Lj1P655T53 Lonicera japonica HOM05D000448 ORTHO05D000291 1.2e-06 57.8 61 49.2
Nn1g05267 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.2e-06 57.8 68 45.6
Nn6g35571 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.2e-06 57.8 199 61.8
Rhsim03G0061600 Rhododendron simsii HOM05D003997 ORTHO05D002698 1.2e-06 57.8 68 47.1
Hund18695 Selenicereus undatus HOM05D000448 ORTHO05D000291 1.2e-06 57.8 70 42.9
PGSC0003DMG400013763 Solanum tuberosum HOM05D000448 ORTHO05D000291 1.2e-06 57.8 75 40.0
TAR121G0002 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.2e-06 57.8 69 46.4
TAR501G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.2e-06 57.8 69 46.4
Eucgr.C00688 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.6e-06 57.4 71 45.1
Eucgr.C00694 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.6e-06 57.4 71 45.1
FvH4_1g08140 Fragaria vesca HOM05D000448 ORTHO05D000291 1.6e-06 57.4 70 42.9
FAN19G2762 Fragaria x ananassa HOM05D000544 ORTHO05D000291 1.6e-06 57.4 70 42.9
Hma1.2p1_0231F.1_g097610 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 1.6e-06 57.4 75 42.7
Rhsim05G0013100 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.6e-06 57.4 71 45.1
Sopen08g017880 Solanum pennellii HOM05D000448 ORTHO05D000291 1.6e-06 57.4 74 40.5
vmacro17172 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.6e-06 57.4 71 46.5
vmacro20893 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.6e-06 57.4 70 44.3
Eucgr.C00686 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.1e-06 57.0 71 47.9
CAN.G712.1 Capsicum annuum HOM05D000448 ORTHO05D000291 2.7e-06 56.6 74 39.2
Eucgr.C03211 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.7e-06 56.6 72 45.8
Lsat_1_v5_gn_5_30860 Lactuca sativa HOM05D000448 ORTHO05D000291 2.7e-06 56.6 73 42.5
Rhsim03G0060500 Rhododendron simsii HOM05D000448 ORTHO05D000291 2.7e-06 56.6 67 44.8
Rhsim03G0060800 Rhododendron simsii HOM05D000448 ORTHO05D000291 2.7e-06 56.6 67 44.8
Solyc08g062360.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 2.7e-06 56.6 74 40.5
EL10Ac2g03997 Beta vulgaris HOM05D000448 ORTHO05D000291 3.6e-06 56.2 71 45.1
Cc06_g19870 Coffea canephora HOM05D000448 ORTHO05D000291 3.6e-06 56.2 71 38.0
Eucgr.C03591 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.6e-06 56.2 72 45.8
Eucgr.L02370 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.6e-06 56.2 71 45.1
Nn7g36771 Nelumbo nucifera HOM05D000448 ORTHO05D000291 3.6e-06 56.2 73 45.2
CiPaw.04G146800 Carya illinoinensis HOM05D000448 ORTHO05D000291 4.6e-06 55.8 70 44.3
Duzib235G1327 Durio zibethinus HOM05D000448 ORTHO05D000291 4.6e-06 55.8 70 41.4
Eucgr.C01885 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.6e-06 55.8 71 45.1
Eucgr.C02980 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.6e-06 55.8 72 45.8
HanXRQChr12g0358821 Helianthus annuus HOM05D000448 ORTHO05D000291 4.6e-06 55.8 196 53.1
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 4.6e-06 55.8 77 40.3
Eucgr.C00592 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.1e-06 55.5 71 45.1
Eucgr.C01889 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.1e-06 55.5 71 43.7
Eucgr.C03608 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.1e-06 55.5 72 44.4
Eucgr.C03613 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.1e-06 55.5 72 44.4
Hma1.2p1_0732F.1_g210020 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 6.1e-06 55.5 71 45.1
SalBow1G3264 Salvia bowleyana HOM05D000448 ORTHO05D000291 6.1e-06 55.5 70 40.0
MSTRG.10528 Avicennia marina HOM05D000448 ORTHO05D000291 7.9e-06 55.1 70 42.9
EL10Ac2g03995 Beta vulgaris HOM05D000448 ORTHO05D000291 7.9e-06 55.1 74 45.9
CSS0018902 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 7.9e-06 55.1 66 40.9
CAN.G68.15 Capsicum annuum HOM05D000448 ORTHO05D000291 7.9e-06 55.1 74 37.8
AUR62009251 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.9e-06 55.1 74 40.5
COL.COLO4_35174 Corchorus olitorius HOM05D000448 ORTHO05D000291 7.9e-06 55.1 74 43.2
Eucgr.C03366 Eucalyptus grandis HOM05D000448 ORTHO05D000291 7.9e-06 55.1 70 44.3
Rhsim11G0060000 Rhododendron simsii HOM05D000448 ORTHO05D000291 7.9e-06 55.1 67 46.3


User provided reference genes

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