Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 7.9e-155 550.4 284 100.0
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.5e-41 172.6 351 38.2
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.0e-38 162.2 343 37.6
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-36 157.9 390 33.8
Rhsim01G0081500 Rhododendron simsii HOM05D005012 ORTHO05D005886 5.7e-20 102.4 166 41.6
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 7.4e-20 102.1 65 80.0
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 1.3e-19 101.3 222 28.8
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.0e-16 91.7 193 30.1
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 1.3e-16 91.3 146 34.9
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.9e-16 90.1 177 34.5
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.5e-16 88.6 171 35.1
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 1.4e-15 87.8 189 31.2
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 1.4e-15 87.8 183 31.7
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 3.2e-15 86.7 220 27.7
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.5e-15 85.9 209 29.7
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 5.5e-15 85.9 124 39.5
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.2e-15 85.5 209 29.7
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.2e-15 85.5 139 37.4
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-15 85.1 214 26.6
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.7e-14 82.8 229 27.9
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 6.1e-14 82.4 182 29.1
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-13 81.3 207 29.0
CSS0034991 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-13 81.3 116 40.5
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-13 80.5 209 28.7
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.0e-13 80.1 209 28.7
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.9e-13 79.7 212 28.8
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.0 139 36.0
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.0 139 36.0
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.0 139 36.0
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.7e-13 79.0 161 32.9
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.7e-13 79.0 161 32.9
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.8e-13 78.6 161 33.5
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.0e-12 77.4 217 26.7
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.0e-12 77.4 217 26.7
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.0e-12 77.4 217 26.7
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.0e-12 77.4 161 32.9
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-12 77.0 141 34.8
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.3e-12 76.6 146 34.2
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.4e-12 76.3 146 34.2
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.7e-12 75.9 139 35.3
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.4e-12 75.5 139 36.0
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.3e-11 74.7 161 32.3
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-11 74.3 107 39.3
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.7e-11 74.3 202 28.7
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.7e-11 74.3 161 31.7
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.7e-11 74.3 202 28.7
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-11 73.9 144 34.0
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-11 73.9 144 34.0
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-11 73.9 144 34.0
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-11 73.9 144 34.0
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-11 73.9 144 34.0
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-11 73.9 144 34.0
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-11 73.9 144 34.0
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 2.8e-11 73.6 161 31.7
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.7e-11 73.2 159 30.8
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-11 72.8 107 38.3
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-11 72.8 107 38.3
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-11 72.8 107 38.3
Rhsim07G0167600 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.8e-11 72.8 114 41.2
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-11 72.4 144 33.3
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.2e-11 72.0 171 31.0
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.1e-10 71.6 125 32.8
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-10 71.2 107 37.4
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-10 70.5 109 36.7
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.4e-10 70.5 161 29.8
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.1e-10 70.1 107 37.4
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.0e-09 67.4 188 26.6
CSS0028764 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-08 64.7 132 34.8
CSS0022576 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-08 63.9 108 35.2
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-08 63.9 120 33.3
CSS0013518 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.5e-08 62.0 107 34.6
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.5e-08 62.0 160 29.4
CSS0019248 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-07 61.6 74 45.9
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.1e-07 61.6 171 27.5
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-07 61.2 120 32.5
CSS0018351 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.2e-07 58.9 107 35.5
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.4e-07 58.5 120 31.7
CSS0038071 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.4e-07 58.5 125 32.0
FAN26G2799 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-07 58.5 99 33.3
CSS0037492 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-06 58.2 107 33.6
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-06 57.4 120 32.5
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.7e-06 57.0 54 44.4
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 56.2 155 29.7
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 8.0e-06 55.5 142 31.0


User provided reference genes

Program Settings