Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03656 Vaccinium macrocarpon HOM05D005176 ORTHO05D006482 1.3e-210 736.1 370 100.0
Rhsim13G0148600 Rhododendron simsii HOM05D005176 ORTHO05D006482 1.1e-177 626.7 370 86.5
CSS0003829 Camellia sinensis var. sinensis HOM05D005176 ORTHO05D006482 4.9e-149 531.6 360 78.1
Hma1.2p1_0660F.1_g197450 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 7.1e-140 501.1 372 71.2
Dinv20117 Davidia involucrata HOM05D005176 ORTHO05D006482 5.1e-138 495.0 361 72.0
Actinidia26877 Actinidia chinensis HOM05D005176 ORTHO05D006482 8.7e-138 494.2 338 76.9
TAR626G1813 Trochodendron aralioides HOM05D005176 ORTHO05D006482 1.1e-137 493.8 378 68.0
Oeu002752.3 Olea europaea HOM05D005176 ORTHO05D006482 4.8e-136 488.4 319 75.2
Cpa.g.sc152.62 Carica papaya HOM05D005176 ORTHO05D006482 8.2e-136 487.6 370 69.5
Lj1A1237T47 Lonicera japonica HOM05D005176 ORTHO05D006482 1.1e-135 487.3 369 69.1
Sabra11G0011400 Salix brachista HOM05D005176 ORTHO05D006482 1.1e-135 487.3 373 69.2
Sabra11G0013200 Salix brachista HOM05D005176 ORTHO05D006482 1.1e-135 487.3 373 69.2
Eucgr.E03960 Eucalyptus grandis HOM05D005176 ORTHO05D006482 5.3e-135 485.0 366 68.3
CANSAT56G2407 Cannabis sativa HOM05D005176 ORTHO05D006482 6.9e-135 484.6 367 68.1
QL05p070074 Quercus lobata HOM05D005176 ORTHO05D006482 1.5e-134 483.4 368 68.5
Haze_06890 Corylus avellana HOM05D005176 ORTHO05D006482 3.4e-134 482.3 379 66.8
QL03p008214 Quercus lobata HOM05D005176 ORTHO05D006482 4.5e-134 481.9 368 68.5
FAN25G2381 Fragaria x ananassa HOM05D005176 ORTHO05D006482 1.0e-133 480.7 383 66.1
MD10G1328600 Malus domestica HOM05D005176 ORTHO05D006482 1.3e-133 480.3 367 67.6
CiPaw.09G100100 Carya illinoinensis HOM05D005176 ORTHO05D006482 2.9e-133 479.2 369 68.6
FvH4_3g01250 Fragaria vesca HOM05D005176 ORTHO05D006482 2.9e-133 479.2 379 66.8
Gorai.009G182200 Gossypium raimondii HOM05D005176 ORTHO05D006482 1.4e-132 476.9 364 69.2
RcHm_v2.0_Chr5g0001781 Rosa chinensis HOM05D005176 ORTHO05D006482 1.4e-132 476.9 378 66.4
Gohir.A05G173800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 4.2e-132 475.3 364 68.7
PGSC0003DMG400013335 Solanum tuberosum HOM05D005176 ORTHO05D006482 5.5e-132 474.9 378 66.9
PSO832G1336 Papaver somniferum HOM05D005176 ORTHO05D006482 9.4e-132 474.2 387 66.1
Potri.011G021800 Populus trichocarpa HOM05D005176 ORTHO05D006482 1.2e-131 473.8 369 67.8
Thecc.06G230100 Theobroma cacao HOM05D005176 ORTHO05D006482 1.6e-131 473.4 373 66.8
Prupe.4G013400 Prunus persica HOM05D005176 ORTHO05D006482 3.6e-131 472.2 366 68.9
TWI63G1683 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 4.6e-131 471.9 368 67.9
Manes.16G002000 Manihot esculenta HOM05D005176 ORTHO05D006482 1.4e-130 470.3 374 66.3
TWI38G1933 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 5.1e-130 468.4 370 66.8
Aqoxy1G04164 Aquilegia oxysepala HOM05D005176 ORTHO05D006482 6.7e-130 468.0 381 64.3
Migut.M01360 Erythranthe guttata HOM05D005176 ORTHO05D006482 6.7e-130 468.0 383 65.5
Solyc11g011990.2 Solanum lycopersicum HOM05D005176 ORTHO05D006482 8.8e-130 467.6 374 65.5
SalBow8G4341 Salvia bowleyana HOM05D005176 ORTHO05D006482 4.3e-129 465.3 371 66.3
MSTRG.16005 Avicennia marina HOM05D005176 ORTHO05D006482 9.7e-129 464.2 320 71.2
AUR62012769 Chenopodium quinoa HOM05D005176 ORTHO05D006482 9.7e-129 464.2 374 66.8
Sopen11g006800 Solanum pennellii HOM05D005176 ORTHO05D006482 9.7e-129 464.2 375 65.9
Nn1g03357 Nelumbo nucifera HOM05D005176 ORTHO05D006482 2.8e-128 462.6 318 72.3
COL.COLO4_31852 Corchorus olitorius HOM05D005176 ORTHO05D006482 3.7e-128 462.2 366 67.5
PGR042G2916 Punica granatum HOM05D005176 ORTHO05D006482 3.7e-128 462.2 332 71.4
Hund21443 Selenicereus undatus HOM05D005176 ORTHO05D006482 3.7e-128 462.2 381 65.9
MELO3C021713.2 Cucumis melo HOM05D005176 ORTHO05D006482 4.8e-128 461.8 371 66.3
Ciclev10015546m.g Citrus clementina HOM05D005176 ORTHO05D006482 6.3e-128 461.5 373 65.7
CAN.G1186.9 Capsicum annuum HOM05D005176 ORTHO05D006482 3.1e-127 459.1 315 72.7
Gohir.D05G176800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 4.1e-127 458.8 364 68.1
DCAR_004870 Daucus carota HOM05D005176 ORTHO05D006482 5.3e-127 458.4 338 69.2
Sc05g0009510 Simmondsia chinensis HOM05D005176 ORTHO05D006482 9.1e-127 457.6 371 65.8
arahy.Tifrunner.gnm1.ann1.E5J967 Arachis hypogaea HOM05D005176 ORTHO05D006482 2.0e-126 456.4 321 73.2
EL10Ac8g20147 Beta vulgaris HOM05D005176 ORTHO05D006482 4.5e-126 455.3 377 65.8
CARHR229150 Cardamine hirsuta HOM05D005176 ORTHO05D006482 5.9e-126 454.9 325 70.8
arahy.Tifrunner.gnm1.ann1.8PRB68 Arachis hypogaea HOM05D005176 ORTHO05D006482 1.3e-125 453.8 358 67.9
AL7G31370 Arabidopsis lyrata HOM05D005176 ORTHO05D006482 2.9e-125 452.6 324 71.0
Thhalv10025624m.g Eutrema salsugineum HOM05D005176 ORTHO05D006482 3.8e-125 452.2 323 69.3
Glyma.09G008500 Glycine max HOM05D005176 ORTHO05D006482 5.0e-125 451.8 341 69.2
Glyma.15G112900 Glycine max HOM05D005176 ORTHO05D006482 8.5e-125 451.1 345 69.0
Sp7g20380 Schrenkiella parvula HOM05D005176 ORTHO05D006482 8.5e-125 451.1 323 69.0
Psat1g177440 Pisum sativum HOM05D005176 ORTHO05D006482 1.1e-124 450.7 352 67.6
Carub.0007s1906 Capsella rubella HOM05D005176 ORTHO05D006482 1.9e-124 449.9 323 70.0
Lj6g0018145 Lotus japonicus HOM05D005176 ORTHO05D006482 3.2e-124 449.1 352 68.8
Cfa000134 Carpinus fangiana HOM05D005176 ORTHO05D006482 7.2e-124 448.0 342 68.4
TPR.G13024 Trifolium pratense HOM05D005176 ORTHO05D006482 9.4e-124 447.6 316 71.8
CsaV3_1G045890 Cucumis sativus L. HOM05D005176 ORTHO05D006482 4.7e-123 445.3 368 65.2
PSO210G5061 Papaver somniferum HOM05D005176 ORTHO05D006482 4.7e-123 445.3 380 64.7
Lsat_1_v5_gn_7_14460 Lactuca sativa HOM05D005176 ORTHO05D006482 6.1e-123 444.9 370 64.1
Lalb_Chr15g0087861 Lupinus albus HOM05D005176 ORTHO05D006482 1.4e-122 443.7 369 64.8
Medtr2g025140 Medicago truncatula HOM05D005176 ORTHO05D006482 1.4e-122 443.7 353 66.3
VMungo0540G1825 Vigna mungo HOM05D005176 ORTHO05D006482 1.4e-122 443.7 351 67.2
Phvul.006G144800 Phaseolus vulgaris HOM05D005176 ORTHO05D006482 1.8e-122 443.4 350 67.1
Atru.chr10.2310 Acer truncatum HOM05D005176 ORTHO05D006482 5.1e-122 441.8 341 69.2
Ca_00707_v3 Cicer arietinum L. HOM05D005176 ORTHO05D006482 6.7e-122 441.4 370 64.6
Potri.004G002600 Populus trichocarpa HOM05D005176 ORTHO05D006482 1.1e-121 440.7 322 68.6
Sabra04G0001100 Salix brachista HOM05D005176 ORTHO05D006482 1.1e-121 440.7 372 64.0
BcaC09g51146 Brassica carinata HOM05D005176 ORTHO05D006482 1.5e-121 440.3 325 68.9
THA.LOC104812984 Tarenaya hassleriana HOM05D005176 ORTHO05D006482 2.0e-121 439.9 373 61.9
Aa31LG6G4370 Aethionema arabicum HOM05D005176 ORTHO05D006482 5.7e-121 438.3 357 64.4
BolC1t01601H Brassica oleracea HOM05D005176 ORTHO05D006482 5.7e-121 438.3 324 69.4
BcaNung03749 Brassica carinata HOM05D005176 ORTHO05D006482 2.8e-120 436.0 364 63.5
HanXRQChr05g0129171 Helianthus annuus HOM05D005176 ORTHO05D006482 3.7e-120 435.6 317 69.4
Cc09_g01070 Coffea canephora HOM05D005176 ORTHO05D006482 1.4e-119 433.7 360 65.3
Nitab4.5_0000143g0540 Nicotiana tabacum HOM05D005176 ORTHO05D006482 9.1e-119 431.0 374 62.3
AT4G22260 Arabidopsis thaliana HOM05D005176 ORTHO05D006482 1.2e-118 430.6 297 72.4
BraA01t01306Z Brassica rapa HOM05D005176 ORTHO05D006482 4.5e-118 428.7 324 67.3
SGA_v2.0_scaffold7G03794 Striga asiatica HOM05D005176 ORTHO05D006482 4.5e-118 428.7 336 64.3
unitig_748.g7945 Utricularia gibba HOM05D005176 ORTHO05D006482 2.2e-117 426.4 352 64.2
C01p16510 Brassica napus HOM05D005176 ORTHO05D006482 1.1e-116 424.1 322 67.4
Sed0020812 Sechium edule HOM05D005176 ORTHO05D006482 3.6e-115 419.1 336 65.8
A01p13630 Brassica napus HOM05D005176 ORTHO05D006482 2.6e-113 412.9 321 65.7
ATR1128G104 Amborella trichopoda HOM05D005176 ORTHO05D006482 6.3e-112 408.3 319 65.8
Ah.09g234400 Amaranthus hybridus HOM05D005176 ORTHO05D006482 2.4e-111 406.4 370 61.1
Eucgr.E03967 Eucalyptus grandis HOM05D005176 ORTHO05D006482 2.4e-111 406.4 330 63.9
MD05G1354300 Malus domestica HOM05D005176 ORTHO05D006482 3.5e-110 402.5 369 59.3
TAR624G0457 Trochodendron aralioides HOM05D005176 ORTHO05D006482 3.5e-110 402.5 238 81.1
Os04g0668900 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D006482 5.9e-110 401.7 323 64.4
MELO3C021708.2 Cucumis melo HOM05D005176 ORTHO05D006482 1.9e-108 396.7 407 56.0
Peaxi162Scf00063g00213 Petunia axillaris HOM05D005176 ORTHO05D006482 3.6e-107 392.5 316 64.6
MBI16_g26179_MAGBIO Magnolia biondii HOM05D005176 ORTHO05D006482 3.4e-105 386.0 383 55.9
GSVIVG01006689001 Vitis vinifera HOM05D005176 ORTHO05D006482 1.1e-103 380.9 289 68.5
FAN21G2852 Fragaria x ananassa HOM05D005176 ORTHO05D006482 1.2e-102 377.5 310 64.5
Nitab4.5_0001198g0240 Nicotiana tabacum HOM05D005176 ORTHO05D006482 3.5e-102 375.9 297 68.0
Zm00001eb066910 Zea mays HOM05D005176 ORTHO05D006482 7.7e-102 374.8 312 62.5
SMO200G0146 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 2.1e-99 366.7 270 67.4
CDE04G3552 Ceratophyllum demersum HOM05D005176 ORTHO05D006482 8.0e-99 364.8 377 54.6
Pp3c1_30120 Physcomitrium patens HOM05D005176 ORTHO05D006482 1.2e-94 350.9 315 59.0
Mapoly0050s0020 Marchantia polymorpha HOM05D005176 ORTHO05D006482 8.6e-93 344.7 282 63.1
CBR_g16017 Chara braunii HOM05D005176 ORTHO05D006482 8.9e-90 334.7 228 71.1
Pp3c2_11230 Physcomitrium patens HOM05D005176 ORTHO05D006482 1.2e-89 334.3 300 60.3
ClCG01G009770 Citrullus lanatus HOM05D005176 ORTHO05D006482 4.6e-86 322.4 279 62.7
PSO675G3403 Papaver somniferum HOM05D005176 ORTHO05D006482 1.3e-85 320.9 258 65.1
Dinv13952 Davidia involucrata HOM05D005176 ORTHO05D006482 9.5e-84 314.7 243 71.2
Hma1.2p1_2753F.1_g327930 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 1.7e-80 303.9 283 62.2
Duzib160G0919 Durio zibethinus HOM05D005176 ORTHO05D006482 1.0e-77 294.7 369 48.5
Zm00001eb066920 Zea mays HOM05D005176 ORTHO05D006482 1.1e-76 291.2 312 53.2
FAN21G2340 Fragaria x ananassa HOM05D005176 ORTHO05D006482 1.7e-72 277.3 240 64.2
PRCOL_00003826 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 2.0e-65 253.8 300 48.3
HPP92_004745 Vanilla planifolia HOM05D005176 ORTHO05D006482 2.0e-65 253.8 238 61.3
MCO02G133 Micromonas commoda HOM05D005176 ORTHO05D006482 9.9e-65 251.5 226 57.1
SMO147G0375 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 6.2e-59 232.3 215 53.5
Pp3c27_6780 Physcomitrium patens HOM05D005176 ORTHO05D006482 6.8e-58 228.8 220 52.7
AagrBONN_evm.TU.Sc2ySwM_362.2521 Anthoceros agrestis HOM05D005176 ORTHO05D006482 1.7e-56 224.2 212 52.4
Mapoly0003s0157 Marchantia polymorpha HOM05D005176 ORTHO05D006482 2.9e-56 223.4 202 55.4
Cre07.g350750 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 4.9e-56 222.6 232 50.9
Cre03.g172500 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 2.3e-53 213.8 203 53.7
AUR62021889 Chenopodium quinoa HOM05D005176 ORTHO05D006482 5.3e-50 202.6 375 39.5
MCO02G403 Micromonas commoda HOM05D005176 ORTHO05D006482 5.4e-47 192.6 203 49.3
GSVIVG01007272001 Vitis vinifera HOM05D005176 ORTHO05D006482 3.5e-46 189.9 304 41.4
Duzib235G1273 Durio zibethinus HOM05D005176 ORTHO05D006482 3.3e-44 183.3 115 76.5
Hma1.2p1_0298F.1_g117340 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 1.2e-38 164.9 220 50.9
SEGI_26802 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 2.3e-37 160.6 114 64.9
PRCOL_00006497 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 4.8e-35 152.9 174 47.1
AagrBONN_evm.TU.Sc2ySwM_344.415 Anthoceros agrestis HOM05D005176 ORTHO05D006482 2.4e-34 150.6 109 63.3
HPP92_004744 Vanilla planifolia HOM05D005176 ORTHO05D006482 1.2e-33 148.3 109 65.1
QL03p008204 Quercus lobata HOM05D005176 ORTHO05D006482 4.2e-31 139.8 120 59.2
SEGI_01990 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 3.9e-29 133.3 68 86.8
A03p53390 Brassica napus HOM05D005176 ORTHO05D006482 2.5e-23 114.0 123 50.4
Os03g0847500 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D038931 6.9e-18 95.9 106 54.7
BraA03t14406Z Brassica rapa HOM05D005176 ORTHO05D006482 9.0e-18 95.5 109 49.5
arahy.Tifrunner.gnm1.ann1.E0HWS1 Arachis hypogaea HOM05D005176 ORTHO05D038931 7.7e-17 92.4 94 59.6
CBR_g12323 Chara braunii HOM05D005176 ORTHO05D006482 1.9e-15 87.8 73 57.5
Eucgr.E03965 Eucalyptus grandis HOM05D005176 ORTHO05D006482 7.9e-14 82.4 49 71.4
Lj3g0010948 Lotus japonicus HOM05D005176 ORTHO05D006482 8.8e-13 79.0 37 89.2
CBR_g12320 Chara braunii HOM05D000019 ORTHO05D009492 6.9e-10 69.3 56 58.9
BolC7t45661H Brassica oleracea HOM05D005176 ORTHO05D006482 1.9e-07 61.2 58 55.2


User provided reference genes

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