Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03569 Vaccinium macrocarpon HOM05D001163 ORTHO05D006243 8.0e-193 677.6 528 100.0
Rhsim13G0135800 Rhododendron simsii HOM05D001163 ORTHO05D006243 3.3e-90 336.7 561 54.2
CSS0048305 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D006243 1.4e-48 198.4 612 42.6
CSS0030005 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D006243 3.2e-40 170.6 419 43.0
Dinv17882 Davidia involucrata HOM05D001163 ORTHO05D006243 1.3e-25 122.1 409 41.6
Hma1.2p1_0082F.1_g042580 Hydrangea macrophylla HOM05D001163 ORTHO05D006243 1.6e-23 115.2 421 37.8
Dinv18040 Davidia involucrata HOM05D001163 ORTHO05D006243 1.0e-14 85.9 194 62.9
CiPaw.09G140200 Carya illinoinensis HOM05D001163 ORTHO05D006243 9.6e-13 79.3 270 29.6
Lj1A1151T86 Lonicera japonica HOM05D001163 ORTHO05D006243 9.6e-13 79.3 92 47.8
Peaxi162Scf00036g00414 Petunia axillaris HOM05D001163 ORTHO05D006243 2.1e-12 78.2 67 55.2
unitig_748.g8069 Utricularia gibba HOM05D001163 ORTHO05D006243 4.8e-12 77.0 49 75.5
Sopen02g026760 Solanum pennellii HOM05D001163 ORTHO05D006243 1.1e-11 75.9 108 56.5
Prupe.4G120300 Prunus persica HOM05D001163 ORTHO05D006243 1.8e-11 75.1 207 46.9
GSVIVG01010075001 Vitis vinifera HOM05D001163 ORTHO05D006243 1.8e-11 75.1 232 32.3
DCAR_004358 Daucus carota HOM05D001163 ORTHO05D006243 4.0e-11 73.9 63 58.7
DCAR_007772 Daucus carota HOM05D002112 ORTHO05D005830 4.0e-11 73.9 60 60.0
Cc09_g04670 Coffea canephora HOM05D001163 ORTHO05D006243 5.3e-11 73.6 259 34.4
PGSC0003DMG401013630 Solanum tuberosum HOM05D001163 ORTHO05D006243 5.3e-11 73.6 63 57.1
Oeu052924.1 Olea europaea HOM05D001163 ORTHO05D006243 6.9e-11 73.2 192 40.6
MSTRG.7611 Avicennia marina HOM05D001163 ORTHO05D006243 9.0e-11 72.8 104 55.8
Solyc10g005220.3 Solanum lycopersicum HOM05D001163 ORTHO05D006243 1.5e-10 72.0 56 57.1
Nitab4.5_0001815g0030 Nicotiana tabacum HOM05D001163 ORTHO05D006243 2.6e-10 71.2 249 36.9
Nitab4.5_0004786g0060 Nicotiana tabacum HOM05D001163 ORTHO05D006243 2.6e-10 71.2 106 56.6
Sopen10g001210 Solanum pennellii HOM05D001163 ORTHO05D006243 2.6e-10 71.2 56 57.1
PGSC0003DMG400011288 Solanum tuberosum HOM05D001163 ORTHO05D006243 2.6e-10 71.2 64 51.6
SGA_v2.0_scaffold423G51455 Striga asiatica HOM05D001163 ORTHO05D006243 4.4e-10 70.5 108 40.7
Cfa001158 Carpinus fangiana HOM05D001163 ORTHO05D006243 5.8e-10 70.1 279 27.6
Haze_05193 Corylus avellana HOM05D001163 ORTHO05D006243 5.8e-10 70.1 263 29.3
Potri.003G156400 Populus trichocarpa HOM05D001163 ORTHO05D006243 7.6e-10 69.7 260 27.7
Nitab4.5_0001299g0060 Nicotiana tabacum HOM05D001163 ORTHO05D006243 3.8e-09 67.4 65 50.8
FAN16G0054 Fragaria x ananassa HOM05D001163 ORTHO05D006243 4.9e-09 67.0 107 42.1
FAN21G1127 Fragaria x ananassa HOM05D001163 ORTHO05D006243 4.9e-09 67.0 107 42.1
Ciclev10014128m.g Citrus clementina HOM05D001163 ORTHO05D006243 6.4e-09 66.6 384 31.2
RcHm_v2.0_Chr5g0021761 Rosa chinensis HOM05D001163 ORTHO05D006243 6.4e-09 66.6 106 39.6
FAN25G3497 Fragaria x ananassa HOM05D001163 ORTHO05D006243 1.4e-08 65.5 107 41.1
CANSAT35G1654 Cannabis sativa HOM05D001163 ORTHO05D006243 2.4e-08 64.7 415 29.9
Nitab4.5_0000614g0040 Nicotiana tabacum HOM05D001163 ORTHO05D006243 3.2e-08 64.3 249 34.9
HanXRQChr16g0520861 Helianthus annuus HOM05D001163 ORTHO05D006243 4.2e-08 63.9 265 27.9
Lsat_1_v5_gn_2_59740 Lactuca sativa HOM05D001163 ORTHO05D006243 4.2e-08 63.9 101 36.6
Gohir.D12G049100 Gossypium hirsutum HOM05D001163 ORTHO05D006243 5.4e-08 63.5 65 52.3
Gorai.008G052000 Gossypium raimondii HOM05D001163 ORTHO05D006243 5.4e-08 63.5 65 52.3
Duzib132G0266 Durio zibethinus HOM05D001163 ORTHO05D006243 7.1e-08 63.2 51 62.7
Peaxi162Scf00203g00142 Petunia axillaris HOM05D001163 ORTHO05D006243 1.2e-07 62.4 252 38.9
Dinv18039 Davidia involucrata HOM05D001163 ORTHO05D006243 1.6e-07 62.0 139 36.7
Gohir.A12G050800 Gossypium hirsutum HOM05D001163 ORTHO05D006243 1.6e-07 62.0 65 52.3
MD05G1243100 Malus domestica HOM05D001163 ORTHO05D006243 1.6e-07 62.0 65 49.2
TWI63G1213 Tripterygium wilfordii HOM05D001163 ORTHO05D006243 1.6e-07 62.0 493 26.2
Lj4g0005018 Lotus japonicus HOM05D001163 ORTHO05D006243 2.7e-07 61.2 285 27.4
MD10G1225200 Malus domestica HOM05D001163 ORTHO05D006243 2.7e-07 61.2 65 50.8
Lj6g0024369 Lotus japonicus HOM05D001163 ORTHO05D006243 3.5e-07 60.8 65 52.3
Thecc.02G001500 Theobroma cacao HOM05D001163 ORTHO05D006243 3.5e-07 60.8 51 60.8
TWI38G0101 Tripterygium wilfordii HOM05D001163 ORTHO05D006243 3.5e-07 60.8 246 41.5
Atru.chr10.243 Acer truncatum HOM05D001163 ORTHO05D006243 4.6e-07 60.5 65 50.8
Gorai.005G268800 Gossypium raimondii HOM05D001163 ORTHO05D006243 4.6e-07 60.5 106 38.7
PGR042G0834 Punica granatum HOM05D001163 ORTHO05D006243 4.6e-07 60.5 63 46.0
ECA238G3617 Erigeron canadensis HOM05D001163 ORTHO05D006243 6.0e-07 60.1 109 38.5
Gohir.D02G240300 Gossypium hirsutum HOM05D001163 ORTHO05D006243 6.0e-07 60.1 65 52.3
MELO3C006998.2 Cucumis melo HOM05D001163 ORTHO05D006243 7.9e-07 59.7 67 47.8
FvH4_3g13290 Fragaria vesca HOM05D001163 ORTHO05D006243 7.9e-07 59.7 275 32.7
FAN11G3010 Fragaria x ananassa HOM05D001163 ORTHO05D006243 7.9e-07 59.7 275 32.7
TAR624G0505 Trochodendron aralioides HOM05D001163 ORTHO05D006243 7.9e-07 59.7 212 29.2
Sabra01G0052900 Salix brachista HOM05D001163 ORTHO05D006243 1.3e-06 58.9 65 52.3
Ca_02402_v3 Cicer arietinum L. HOM05D001163 ORTHO05D006243 1.7e-06 58.5 416 26.7
QL11p010904 Quercus lobata HOM05D001163 ORTHO05D006243 1.7e-06 58.5 372 27.2
CsaV3_6G053140 Cucumis sativus L. HOM05D001163 ORTHO05D006243 2.3e-06 58.2 64 48.4
Phvul.009G244700 Phaseolus vulgaris HOM05D001163 ORTHO05D006243 3.0e-06 57.8 106 34.9
HanXRQChr14g0439011 Helianthus annuus HOM05D001163 ORTHO05D006243 3.9e-06 57.4 283 23.3
PSO541G6062 Papaver somniferum HOM05D001163 ORTHO05D006243 3.9e-06 57.4 65 50.8
BcaB02g09497 Brassica carinata HOM05D001163 ORTHO05D006243 5.1e-06 57.0 69 46.4
BcaC02g11575 Brassica carinata HOM05D001163 ORTHO05D006243 5.1e-06 57.0 69 46.4
C04p13870 Brassica napus HOM05D001163 ORTHO05D006243 5.1e-06 57.0 69 46.4
BolC4t22975H Brassica oleracea HOM05D001163 ORTHO05D006243 5.1e-06 57.0 69 46.4
Thhalv10006896m.g Eutrema salsugineum HOM05D001163 ORTHO05D006243 5.1e-06 57.0 52 53.8
SalBow8G5620 Salvia bowleyana HOM05D001163 ORTHO05D006243 5.1e-06 57.0 220 25.9
AL4G30930 Arabidopsis lyrata HOM05D001163 ORTHO05D006243 6.6e-06 56.6 67 44.8
ECA232G1323 Erigeron canadensis HOM05D001163 ORTHO05D006243 8.7e-06 56.2 72 44.4
HanXRQChr09g0257871 Helianthus annuus HOM05D001163 ORTHO05D006243 8.7e-06 56.2 63 44.4
Manes.16G058900 Manihot esculenta HOM05D001163 ORTHO05D006243 8.7e-06 56.2 52 57.7


User provided reference genes

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