Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 2.4e-201 705.3 356 100.0
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.1e-158 563.5 384 78.1
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 6.2e-149 531.2 347 79.5
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 3.4e-147 525.4 346 76.3
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 4.2e-145 518.5 349 73.1
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 2.1e-141 506.1 349 71.9
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 1.4e-140 503.4 347 70.6
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.6e-139 499.2 349 68.2
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 5.8e-139 498.0 333 77.2
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.3e-138 496.9 355 74.9
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 2.4e-137 492.7 349 71.1
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 1.6e-136 490.0 349 68.8
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 2.7e-136 489.2 349 67.9
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 3.5e-136 488.8 347 66.6
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 4.6e-136 488.4 349 69.1
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 3.0e-135 485.7 352 66.8
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 2.5e-134 482.6 347 68.9
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 5.6e-134 481.5 339 70.8
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 2.1e-133 479.6 316 75.3
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 1.8e-132 476.5 346 66.5
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 3.1e-132 475.7 349 67.0
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.4e-131 472.2 347 66.3
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 1.3e-130 470.3 346 67.3
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 2.2e-130 469.5 348 67.2
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 2.9e-130 469.2 341 66.9
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 1.1e-129 467.2 351 65.5
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 1.4e-129 466.8 346 65.9
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 1.4e-129 466.8 363 64.2
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 5.5e-129 464.9 346 66.8
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 7.1e-129 464.5 348 66.4
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 9.3e-129 464.2 365 64.4
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 2.1e-128 463.0 346 66.5
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 3.5e-128 462.2 346 66.5
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 3.5e-128 462.2 348 66.1
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 3.5e-128 462.2 348 65.8
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 1.0e-127 460.7 384 60.9
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 1.0e-127 460.7 342 67.8
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 3.0e-127 459.1 363 66.1
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 5.1e-127 458.4 347 64.6
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 5.1e-127 458.4 348 65.8
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 6.7e-127 458.0 346 65.3
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 6.7e-127 458.0 348 65.8
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 1.1e-126 457.2 346 65.3
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 1.1e-126 457.2 346 65.6
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 1.1e-126 457.2 344 65.1
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 1.9e-126 456.4 348 65.5
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 1.9e-126 456.4 352 65.1
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 2.5e-126 456.1 348 65.8
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.5e-126 456.1 342 67.3
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 2.5e-126 456.1 342 67.3
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.5e-126 456.1 363 65.6
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 3.3e-126 455.7 349 65.0
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 9.6e-126 454.1 339 66.1
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 1.3e-125 453.8 346 64.7
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 1.6e-125 453.4 347 65.7
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 2.8e-125 452.6 346 65.0
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 3.7e-125 452.2 347 65.1
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 3.7e-125 452.2 349 64.8
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 6.2e-125 451.4 337 65.0
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 8.2e-125 451.1 346 64.7
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 8.2e-125 451.1 346 64.7
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 1.1e-124 450.7 347 65.4
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 4.1e-124 448.7 346 64.2
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 9.0e-124 447.6 346 65.0
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 9.0e-124 447.6 349 63.6
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 1.2e-123 447.2 341 64.8
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 1.5e-123 446.8 346 65.3
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 2.6e-123 446.0 346 63.3
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 4.5e-123 445.3 340 63.2
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 1.9e-121 439.9 342 64.9
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 2.5e-121 439.5 346 67.1
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 4.2e-121 438.7 349 62.2
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 1.2e-120 437.2 343 63.6
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 1.3e-119 433.7 349 60.7
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 1.3e-119 433.7 337 63.8
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 2.3e-119 433.0 349 60.5
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 5.1e-119 431.8 337 62.3
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 1.5e-118 430.3 371 61.7
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 3.3e-118 429.1 335 63.0
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 7.4e-118 427.9 396 56.8
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 4.8e-117 425.2 337 61.4
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 6.3e-117 424.9 339 62.2
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 1.4e-116 423.7 349 63.0
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 3.4e-115 419.1 352 61.9
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 1.7e-114 416.8 309 65.4
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 1.4e-111 407.1 338 61.2
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 2.0e-110 403.3 337 60.2
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 1.1e-108 397.5 311 65.0
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 6.9e-108 394.8 344 57.8
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 5.9e-107 391.7 339 59.9
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 7.2e-105 384.8 339 56.9
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 2.3e-103 379.8 342 58.8
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 5.1e-103 378.6 335 58.5
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 8.8e-103 377.9 258 72.1
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 2.6e-102 376.3 276 67.8
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 1.0e-95 354.4 265 63.4
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 1.4e-95 354.0 311 56.6
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 6.7e-95 351.7 245 71.4
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 2.6e-94 349.7 264 65.2
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 3.3e-94 349.4 252 68.7
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 5.9e-91 338.6 343 53.6
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 2.9e-90 336.3 344 52.3
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 3.7e-85 319.3 349 51.0
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 5.2e-79 298.9 328 51.2
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 2.6e-78 296.6 209 70.3
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 1.0e-71 274.6 247 57.9
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 2.6e-70 270.0 243 57.6
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 4.4e-70 269.2 199 64.3
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 4.4e-70 269.2 345 42.9
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 5.7e-70 268.9 343 43.7
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 4.1e-68 262.7 181 68.0
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 4.1e-68 262.7 349 45.6
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 1.3e-66 257.7 348 41.7
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 1.8e-63 247.3 350 40.0
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 2.6e-54 216.9 169 65.7
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 6.6e-50 202.2 186 58.6
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.3e-47 193.7 183 54.6
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 8.9e-47 191.8 139 64.0
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.6e-40 171.0 208 44.2
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 6.2e-40 169.1 332 34.6
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 2.4e-39 167.2 141 58.9
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 8.9e-39 165.2 200 52.5
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 6.4e-37 159.1 365 31.5
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 1.3e-32 144.8 331 32.9
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 2.4e-31 140.6 160 51.2
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.7e-29 134.4 124 56.5
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 1.6e-27 127.9 369 30.6
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 1.4e-20 104.8 246 30.5
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 9.3e-20 102.1 78 64.1
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 9.0e-15 85.5 59 67.8
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 1.0e-13 82.0 65 66.2
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.7e-11 73.9 89 41.6
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 4.6e-11 73.2 55 56.4
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 2.5e-09 67.4 60 51.7
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 5.7e-09 66.2 66 51.5
SHI32710 Sapria himalayana HOM05D005903 ORTHO05D007293 5.7e-09 66.2 85 48.2


User provided reference genes

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