Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 3.2e-89 331.6 159 100.0
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 4.6e-51 204.9 125 81.6
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 1.6e-48 196.4 96 95.8
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.4e-44 183.3 99 86.9
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 2.4e-44 182.6 95 88.4
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 5.4e-44 181.4 95 86.3
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 2.0e-43 179.5 95 88.4
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 2.0e-43 179.5 95 88.4
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 3.5e-43 178.7 96 88.5
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 4.6e-43 178.3 95 87.4
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 1.3e-42 176.8 96 85.4
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 1.7e-42 176.4 95 84.2
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 1.7e-42 176.4 95 85.3
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 1.7e-42 176.4 95 85.3
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 3.0e-42 175.6 95 85.3
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 3.0e-42 175.6 95 87.4
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 3.9e-42 175.3 99 85.9
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 8.6e-42 174.1 101 82.2
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 8.6e-42 174.1 96 82.3
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 8.6e-42 174.1 95 85.3
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 8.6e-42 174.1 96 85.4
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 1.9e-41 172.9 98 84.7
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 2.5e-41 172.6 90 88.9
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 3.3e-41 172.2 93 84.9
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 4.3e-41 171.8 98 82.7
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 4.3e-41 171.8 95 84.2
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 5.6e-41 171.4 95 82.1
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 9.5e-41 170.6 92 84.8
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 9.5e-41 170.6 87 89.7
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 9.5e-41 170.6 91 85.7
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 1.2e-40 170.2 99 83.8
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 1.2e-40 170.2 86 91.9
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 1.2e-40 170.2 95 82.1
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 1.6e-40 169.9 120 72.5
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 1.6e-40 169.9 95 81.1
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 2.1e-40 169.5 87 89.7
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 3.6e-40 168.7 97 82.5
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 8.1e-40 167.5 85 92.9
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 1.8e-39 166.4 86 87.2
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 1.8e-39 166.4 99 79.8
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 2.3e-39 166.0 92 82.6
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 4.0e-39 165.2 86 87.2
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 5.2e-39 164.9 98 77.6
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 5.2e-39 164.9 98 81.6
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 5.2e-39 164.9 84 90.5
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 5.2e-39 164.9 88 84.1
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 5.2e-39 164.9 84 90.5
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 5.2e-39 164.9 86 84.9
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 6.8e-39 164.5 97 80.4
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 8.9e-39 164.1 85 88.2
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 8.9e-39 164.1 100 78.0
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 8.9e-39 164.1 102 79.4
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 8.9e-39 164.1 100 78.0
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 1.2e-38 163.7 103 77.7
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 1.2e-38 163.7 98 80.6
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 1.2e-38 163.7 84 88.1
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 1.5e-38 163.3 84 89.3
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 1.5e-38 163.3 88 84.1
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.0e-38 162.9 95 78.9
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 2.0e-38 162.9 84 88.1
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 3.4e-38 162.2 84 88.1
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 3.4e-38 162.2 98 79.6
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 3.4e-38 162.2 85 85.9
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 4.4e-38 161.8 98 79.6
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 4.4e-38 161.8 98 79.6
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 5.8e-38 161.4 92 80.4
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 9.8e-38 160.6 98 78.6
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 9.8e-38 160.6 98 78.6
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 9.8e-38 160.6 85 85.9
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 9.8e-38 160.6 98 78.6
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 1.3e-37 160.2 98 78.6
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 1.3e-37 160.2 84 89.3
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 2.2e-37 159.5 99 76.8
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 2.2e-37 159.5 98 77.6
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 2.2e-37 159.5 98 77.6
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 2.9e-37 159.1 116 68.1
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 1.9e-36 156.4 89 78.7
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 3.2e-36 155.6 85 82.4
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 9.2e-36 154.1 101 76.2
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 9.2e-36 154.1 85 81.2
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 2.7e-35 152.5 79 89.9
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 8.6e-34 147.5 85 76.5
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 1.5e-33 146.7 102 69.6
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 1.4e-31 140.2 95 72.6
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 1.5e-30 136.7 86 75.6
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 6.4e-29 131.3 143 49.7
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 1.4e-28 130.2 87 69.0
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 1.4e-28 130.2 85 72.9
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 5.6e-25 118.2 64 87.5
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 5.2e-23 111.7 95 62.1
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 2.9e-21 105.9 62 80.6
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 1.9e-20 103.2 71 73.2
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 1.5e-17 93.6 63 71.4
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.6e-17 91.7 50 88.0
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 1.3e-16 90.5 54 83.3
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 1.3e-16 90.5 54 83.3
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 8.1e-16 87.8 59 72.9
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 1.1e-15 87.4 58 70.7
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 3.1e-15 85.9 41 87.8
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 5.3e-15 85.1 52 75.0
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 9.9e-14 80.9 44 86.4
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.7e-13 80.1 54 72.2
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 6.4e-13 78.2 45 82.2
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.4e-12 77.0 44 79.5
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 7.1e-12 74.7 41 85.4
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 4.0e-07 58.9 31 77.4
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 4.5e-06 55.5 38 65.8


User provided reference genes

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