Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.9e-118 429.1 207 100.0
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 8.2e-77 290.8 173 82.7
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 4.2e-65 251.9 172 70.9
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 4.4e-62 241.9 178 68.5
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 7.7e-59 231.1 156 73.7
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 6.5e-58 228.0 151 70.9
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.9e-57 226.5 149 67.1
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 2.5e-57 226.1 138 74.6
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 5.5e-57 224.9 154 70.1
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 5.5e-57 224.9 140 72.9
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 5.5e-57 224.9 164 65.9
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.7e-56 222.6 165 65.5
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 4.7e-56 221.9 158 65.2
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 4.7e-56 221.9 137 72.3
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 1.0e-55 220.7 162 63.6
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.0e-55 220.7 140 72.9
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.8e-55 219.9 167 61.7
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 8.8e-55 217.6 142 69.0
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 2.0e-54 216.5 125 76.8
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.0e-54 216.5 127 78.7
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 2.0e-54 216.5 137 70.8
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 4.4e-54 215.3 137 70.1
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 4.4e-54 215.3 137 70.1
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 5.7e-54 214.9 157 66.2
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 5.7e-54 214.9 153 69.3
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 7.5e-54 214.5 125 76.0
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 7.5e-54 214.5 158 65.8
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.7e-53 213.4 136 72.8
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 2.2e-53 213.0 140 68.6
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.8e-53 212.6 155 64.5
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 3.7e-53 212.2 169 60.4
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.1e-52 210.7 160 62.5
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.8e-52 209.9 138 70.3
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 2.4e-52 209.5 139 69.1
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 5.4e-52 208.4 144 66.0
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 7.0e-52 208.0 137 68.6
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 7.0e-52 208.0 152 64.5
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.6e-51 206.8 163 58.3
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 2.0e-51 206.5 159 61.6
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 3.5e-51 205.7 151 62.3
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.5e-51 205.7 163 57.7
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 1.0e-50 204.1 152 63.8
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 1.0e-50 204.1 144 66.7
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 3.8e-50 202.2 141 66.7
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 8.6e-50 201.1 133 68.4
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.3e-49 199.1 142 64.1
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 5.5e-49 198.4 152 61.2
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 5.5e-49 198.4 155 60.0
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 9.5e-49 197.6 152 60.5
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 2.1e-48 196.4 163 57.1
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 2.1e-48 196.4 162 60.5
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 2.8e-48 196.1 145 62.8
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.8e-48 196.1 162 58.6
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 4.7e-48 195.3 152 59.9
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 4.7e-48 195.3 138 62.3
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 8.0e-48 194.5 158 59.5
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.0e-47 194.1 152 58.6
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.4e-47 193.7 152 59.2
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.8e-47 193.4 140 62.9
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 2.3e-47 193.0 137 67.2
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 3.0e-47 192.6 147 60.5
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 3.0e-47 192.6 152 57.9
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 3.0e-47 192.6 152 57.9
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 5.2e-47 191.8 136 64.0
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 5.2e-47 191.8 142 62.0
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 5.2e-47 191.8 162 59.9
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 6.8e-47 191.4 141 61.7
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 6.8e-47 191.4 138 60.9
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 8.9e-47 191.0 152 59.2
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.5e-46 190.3 153 56.9
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 4.4e-46 188.7 141 61.0
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 7.5e-46 188.0 152 58.6
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 9.8e-46 187.6 166 56.0
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.3e-45 187.2 152 58.6
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.3e-45 187.2 154 59.1
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 1.3e-45 187.2 165 56.4
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 1.3e-45 187.2 148 58.8
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 2.2e-45 186.4 162 57.4
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 2.2e-45 186.4 143 58.7
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 2.8e-45 186.0 170 55.3
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 6.3e-45 184.9 136 61.8
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.0e-43 179.9 177 50.3
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 7.8e-43 177.9 150 56.0
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 1.0e-42 177.6 134 59.0
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.3e-42 176.4 147 55.1
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 5.0e-42 175.3 141 61.0
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 4.3e-41 172.2 106 72.6
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 7.3e-41 171.4 170 53.5
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 1.6e-40 170.2 152 50.7
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.6e-40 170.2 171 48.0
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 4.7e-40 168.7 123 61.8
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 1.0e-39 167.5 152 50.0
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.0e-39 167.5 147 52.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 3.4e-38 162.5 178 48.9
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 4.4e-38 162.2 132 59.8
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 2.9e-37 159.5 107 66.4
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.4e-36 155.2 93 79.6
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 7.8e-35 151.4 163 49.7
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 1.6e-32 143.7 115 57.4
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 4.0e-31 139.0 155 48.4
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 1.3e-29 134.0 110 57.3
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 4.1e-28 129.0 161 39.1
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 1.2e-27 127.5 128 44.5
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 6.6e-26 121.7 75 69.3
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 8.6e-26 121.3 131 42.7
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 9.5e-25 117.9 213 35.2
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 2.3e-23 113.2 145 37.9
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 9.9e-22 107.8 89 55.1
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 4.9e-21 105.5 63 73.0
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 6.2e-16 88.6 141 36.2
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 6.2e-16 88.6 155 35.5
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 8.1e-16 88.2 69 65.2
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 2.9e-13 79.7 109 37.6
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.2e-12 75.9 77 50.6
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 1.7e-10 70.5 75 48.0
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 5.1e-10 68.9 132 34.1
Cfa003473 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.6e-08 62.8 32 81.2
Cfa001145 Carpinus fangiana HOM05D000011 ORTHO05D000157 1.1e-07 61.2 67 46.3
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 1.4e-07 60.8 156 27.6
Cfa005130 Carpinus fangiana HOM05D000013 ORTHO05D000011 5.3e-07 58.9 32 75.0
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 6.9e-07 58.5 53 54.7
Cfa014827 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.2e-06 57.8 31 77.4
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 9.9e-06 54.7 32 71.9


User provided reference genes

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