Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 8.1e-230 800.0 401 100.0
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 2.4e-165 585.9 399 74.9
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 6.4e-126 454.9 389 64.5
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 1.1e-122 444.1 400 61.2
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 6.8e-112 408.3 396 57.3
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 6.6e-99 365.2 395 52.7
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 1.2e-95 354.4 389 51.9
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 4.5e-95 352.4 386 52.1
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 4.5e-95 352.4 396 50.3
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 4.9e-94 349.0 381 52.0
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 8.4e-94 348.2 394 50.8
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 2.4e-93 346.7 398 49.0
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.4e-93 346.7 394 50.5
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 2.1e-92 343.6 394 50.3
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 1.3e-91 340.9 396 50.5
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 5.1e-91 339.0 401 48.4
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.5e-90 336.7 400 49.5
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 7.4e-90 335.1 396 48.5
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 2.8e-89 333.2 396 49.0
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 1.7e-86 323.9 386 47.4
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 1.8e-83 313.9 355 47.3
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 2.3e-83 313.5 355 47.0
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 8.2e-65 251.9 393 41.0
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 3.4e-63 246.5 231 61.5
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 5.7e-58 229.2 258 50.0
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 1.7e-54 217.6 258 45.7
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 2.5e-53 213.8 362 37.8
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 1.4e-51 208.0 358 34.6
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 3.8e-38 163.3 202 43.1
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 8.0e-36 155.6 228 36.0
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 2.5e-29 134.0 375 28.3
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 1.2e-26 125.2 372 27.2
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 2.0e-26 124.4 314 28.0
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 3.4e-26 123.6 371 28.0
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 3.7e-25 120.2 389 27.0
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 1.1e-24 118.6 141 52.5
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 5.4e-24 116.3 381 25.5
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 9.2e-24 115.5 95 55.8
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.2e-23 115.2 383 26.1
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 4.9e-17 93.2 97 50.5
CBR_g6349 Chara braunii HOM05D000186 ORTHO05D000347 9.5e-13 79.0 269 22.7
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 8.0e-12 75.9 106 34.9
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 1.1e-08 65.5 76 43.4
AT1G06780 Arabidopsis thaliana HOM05D000186 ORTHO05D005094 5.4e-08 63.2 291 24.4
BolC5t29267H Brassica oleracea HOM05D000186 ORTHO05D005094 9.2e-08 62.4 304 24.0
Carub.0001s0610 Capsella rubella HOM05D000186 ORTHO05D005094 2.7e-07 60.8 302 23.5
BcaC05g24650 Brassica carinata HOM05D000186 ORTHO05D005094 3.5e-07 60.5 304 24.0
AL1G16790 Arabidopsis lyrata HOM05D000186 ORTHO05D005094 4.6e-07 60.1 285 24.6
BraA10t42801Z Brassica rapa HOM05D000186 ORTHO05D005094 6.0e-07 59.7 309 23.9
A09p66790 Brassica napus HOM05D000186 ORTHO05D005094 1.0e-06 58.9 309 23.3
BraA09t42017Z Brassica rapa HOM05D000186 ORTHO05D005094 2.3e-06 57.8 306 22.5
BcaB02g06757 Brassica carinata HOM05D000186 ORTHO05D005094 3.9e-06 57.0 310 23.9
BcaC07g42049 Brassica carinata HOM05D000186 ORTHO05D005094 3.9e-06 57.0 311 22.8
BcaC07g42537 Brassica carinata HOM05D000186 ORTHO05D005094 5.0e-06 56.6 280 23.6
C08p51010 Brassica napus HOM05D000186 ORTHO05D005094 5.0e-06 56.6 311 22.8


User provided reference genes

Program Settings