Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03415 Vaccinium macrocarpon HOM05D005265 ORTHO05D006326 4.5e-65 251.1 130 100.0
Dinv15893 Davidia involucrata HOM05D005265 ORTHO05D006326 1.5e-52 209.5 131 82.4
Hma1.2p1_0689F.1_g203690 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 6.3e-51 204.1 131 78.6
Hma1.2p1_1418F.1_g282220 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 6.3e-51 204.1 131 78.6
CSS0007721 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 2.4e-50 202.2 132 82.6
CSS0016265 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 2.4e-50 202.2 132 82.6
Nitab4.5_0002991g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 2.4e-50 202.2 131 80.2
Actinidia13436 Actinidia chinensis HOM05D005265 ORTHO05D006326 3.1e-50 201.8 131 82.4
Dinv32199 Davidia involucrata HOM05D005265 ORTHO05D006326 3.1e-50 201.8 131 80.2
Duzib132G0868 Durio zibethinus HOM05D005265 ORTHO05D006326 3.1e-50 201.8 130 80.0
Nitab4.5_0003368g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 3.1e-50 201.8 131 79.4
GSVIVG01021584001 Vitis vinifera HOM05D005265 ORTHO05D006326 1.2e-49 199.9 131 79.4
CiPaw.10G086700 Carya illinoinensis HOM05D005265 ORTHO05D006326 2.7e-49 198.7 130 78.5
Lalb_Chr08g0233241 Lupinus albus HOM05D005265 ORTHO05D006326 2.7e-49 198.7 130 80.0
Lj1g0015817 Lotus japonicus HOM05D005265 ORTHO05D006326 3.5e-49 198.4 131 79.4
Phvul.009G216400 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 4.5e-49 198.0 130 78.5
VMungo1309G1099 Vigna mungo HOM05D005265 ORTHO05D006326 4.5e-49 198.0 130 78.5
Cpa.g.sc17.68 Carica papaya HOM05D005265 ORTHO05D006326 5.9e-49 197.6 130 79.2
Rhsim13G0119400 Rhododendron simsii HOM05D005265 ORTHO05D006326 5.9e-49 197.6 130 82.3
Sopen08g002900 Solanum pennellii HOM05D005265 ORTHO05D006326 5.9e-49 197.6 131 78.6
Aqoxy4G00026 Aquilegia oxysepala HOM05D005265 ORTHO05D006326 7.8e-49 197.2 129 79.1
Eucgr.D00234 Eucalyptus grandis HOM05D005265 ORTHO05D006326 7.8e-49 197.2 132 78.0
Actinidia33666 Actinidia chinensis HOM05D005265 ORTHO05D006326 1.0e-48 196.8 131 80.9
CANSAT35G0137 Cannabis sativa HOM05D005265 ORTHO05D006326 1.0e-48 196.8 130 76.9
Migut.M01877 Erythranthe guttata HOM05D005265 ORTHO05D006326 1.0e-48 196.8 131 77.1
HanXRQChr04g0113581 Helianthus annuus HOM05D005265 ORTHO05D006326 1.0e-48 196.8 131 77.9
PGSC0003DMG400020505 Solanum tuberosum HOM05D005265 ORTHO05D006326 1.0e-48 196.8 131 77.9
Glyma.15G194300 Glycine max HOM05D005265 ORTHO05D006326 1.3e-48 196.4 130 77.7
PGR083G1323 Punica granatum HOM05D005265 ORTHO05D006326 1.3e-48 196.4 130 77.7
Solyc08g006930.3 Solanum lycopersicum HOM05D005265 ORTHO05D006326 1.3e-48 196.4 131 77.9
arahy.Tifrunner.gnm1.ann1.9042LP Arachis hypogaea HOM05D005265 ORTHO05D006326 1.7e-48 196.1 130 76.9
CiPaw.09G117100 Carya illinoinensis HOM05D005265 ORTHO05D006326 1.7e-48 196.1 130 78.5
Peaxi162Scf00045g02242 Petunia axillaris HOM05D005265 ORTHO05D006326 1.7e-48 196.1 132 78.8
Thecc.02G010800 Theobroma cacao HOM05D005265 ORTHO05D006326 1.7e-48 196.1 130 77.7
CAN.G1882.1 Capsicum annuum HOM05D005265 ORTHO05D006326 2.3e-48 195.7 131 77.1
Haze_05746 Corylus avellana HOM05D005265 ORTHO05D006326 2.3e-48 195.7 131 75.6
MSTRG.7528 Avicennia marina HOM05D005265 ORTHO05D006326 2.9e-48 195.3 133 78.9
SalBow8G5437 Salvia bowleyana HOM05D005265 ORTHO05D006326 2.9e-48 195.3 130 75.4
Nitab4.5_0001809g0020 Nicotiana tabacum HOM05D005265 ORTHO05D006326 3.9e-48 194.9 131 78.6
arahy.Tifrunner.gnm1.ann1.ZS1M1K Arachis hypogaea HOM05D005265 ORTHO05D006326 5.0e-48 194.5 131 77.9
CARHR029770 Cardamine hirsuta HOM05D005265 ORTHO05D006326 5.0e-48 194.5 131 77.1
Ca_12734_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 5.0e-48 194.5 132 79.5
Ca_12740_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 5.0e-48 194.5 132 79.5
Oeu040090.1 Olea europaea HOM05D005265 ORTHO05D006326 5.0e-48 194.5 131 77.1
THA.LOC104812683 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 5.0e-48 194.5 131 77.9
ECA236G4370 Erigeron canadensis HOM05D005265 ORTHO05D006326 6.6e-48 194.1 133 78.2
Atru.chr10.966 Acer truncatum HOM05D005265 ORTHO05D006326 8.6e-48 193.7 130 76.2
COL.COLO4_17668 Corchorus olitorius HOM05D005265 ORTHO05D006326 8.6e-48 193.7 130 76.9
Nitab4.5_0000100g0280 Nicotiana tabacum HOM05D005265 ORTHO05D006326 8.6e-48 193.7 131 77.9
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 1.1e-47 193.4 130 80.0
MD00G1109700 Malus domestica HOM05D005265 ORTHO05D006326 1.1e-47 193.4 129 77.5
Sp1g26220 Schrenkiella parvula HOM05D005265 ORTHO05D006326 1.5e-47 193.0 131 77.1
THA.LOC104814318 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 1.5e-47 193.0 133 78.2
TAR624G1044 Trochodendron aralioides HOM05D005265 ORTHO05D006326 1.5e-47 193.0 130 76.9
AT1G30380 Arabidopsis thaliana HOM05D005265 ORTHO05D006326 1.9e-47 192.6 131 75.6
Gohir.D02G238400 Gossypium hirsutum HOM05D005265 ORTHO05D006326 2.5e-47 192.2 129 76.0
Gorai.005G266900 Gossypium raimondii HOM05D005265 ORTHO05D006326 2.5e-47 192.2 129 76.0
Phvul.002G140800 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 2.5e-47 192.2 130 76.2
Carub.0001s2858 Capsella rubella HOM05D005265 ORTHO05D006326 3.3e-47 191.8 130 75.4
DCAR_004804 Daucus carota HOM05D005265 ORTHO05D006326 3.3e-47 191.8 131 76.3
Gohir.A03G216800 Gossypium hirsutum HOM05D005265 ORTHO05D006326 3.3e-47 191.8 129 76.0
TAR626G0103 Trochodendron aralioides HOM05D005265 ORTHO05D006326 4.3e-47 191.4 129 77.5
HanXRQChr15g0481551 Helianthus annuus HOM05D005265 ORTHO05D006326 5.6e-47 191.0 129 79.1
Prupe.4G088200 Prunus persica HOM05D005265 ORTHO05D006326 5.6e-47 191.0 129 76.0
DCAR_004805 Daucus carota HOM05D005265 ORTHO05D006326 7.3e-47 190.7 131 76.3
Manes.14G134800 Manihot esculenta HOM05D005265 ORTHO05D006326 7.3e-47 190.7 130 75.4
Sc24g0001600 Simmondsia chinensis HOM05D005265 ORTHO05D006326 7.3e-47 190.7 131 75.6
TAR626G0742 Trochodendron aralioides HOM05D005265 ORTHO05D006326 9.5e-47 190.3 129 77.5
BcaB03g12211 Brassica carinata HOM05D005265 ORTHO05D006326 1.2e-46 189.9 131 75.6
BcaC01g00188 Brassica carinata HOM05D005265 ORTHO05D006326 1.2e-46 189.9 131 75.6
A08p24490 Brassica napus HOM05D005265 ORTHO05D006326 1.2e-46 189.9 131 75.6
C03p76720 Brassica napus HOM05D005265 ORTHO05D006326 1.2e-46 189.9 131 75.6
BraA08t34405Z Brassica rapa HOM05D005265 ORTHO05D006326 1.2e-46 189.9 131 75.6
FAN25G1721 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.2e-46 189.9 129 77.5
Cfa000859 Carpinus fangiana HOM05D005265 ORTHO05D006326 1.6e-46 189.5 131 73.3
FAN16G0550 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.6e-46 189.5 129 77.5
QL05p054070 Quercus lobata HOM05D005265 ORTHO05D006326 1.6e-46 189.5 130 76.2
RcHm_v2.0_Chr5g0015361 Rosa chinensis HOM05D005265 ORTHO05D006326 1.6e-46 189.5 129 77.5
Potri.006G254200 Populus trichocarpa HOM05D005265 ORTHO05D006326 4.7e-46 188.0 132 77.3
ClCG01G025030 Citrullus lanatus HOM05D005265 ORTHO05D006326 6.1e-46 187.6 131 75.6
BraA09t39132Z Brassica rapa HOM05D005265 ORTHO05D006326 8.0e-46 187.2 132 75.8
FvH4_3g09680 Fragaria vesca HOM05D005265 ORTHO05D006326 8.0e-46 187.2 129 76.0
FAN11G2263 Fragaria x ananassa HOM05D005265 ORTHO05D006326 8.0e-46 187.2 129 76.0
Glyma.09G087700 Glycine max HOM05D005265 ORTHO05D006326 1.0e-45 186.8 133 75.9
Manes.06G061100 Manihot esculenta HOM05D005265 ORTHO05D006326 1.0e-45 186.8 129 74.4
Cc09_g08490 Coffea canephora HOM05D005265 ORTHO05D006326 1.4e-45 186.4 131 72.5
Lsat_1_v5_gn_7_32001 Lactuca sativa HOM05D005265 ORTHO05D006326 1.4e-45 186.4 132 76.5
Thhalv10009090m.g Eutrema salsugineum HOM05D005265 ORTHO05D006326 1.8e-45 186.0 132 75.0
BcaC05g27071 Brassica carinata HOM05D005265 ORTHO05D006326 2.3e-45 185.7 132 75.0
A09p36080 Brassica napus HOM05D005265 ORTHO05D006326 2.3e-45 185.7 132 75.0
C05p29330 Brassica napus HOM05D005265 ORTHO05D006326 2.3e-45 185.7 132 75.0
BolC5t31665H Brassica oleracea HOM05D005265 ORTHO05D006326 2.3e-45 185.7 132 75.0
AL1G44320 Arabidopsis lyrata HOM05D005265 ORTHO05D006326 3.1e-45 185.3 132 74.2
EL10Ac7g15766 Beta vulgaris HOM05D005265 ORTHO05D006326 3.1e-45 185.3 130 72.3
Medtr1g026820 Medicago truncatula HOM05D005265 ORTHO05D006326 3.1e-45 185.3 132 76.5
Sed0012654 Sechium edule HOM05D005265 ORTHO05D006326 3.1e-45 185.3 131 77.1
MD05G1276100 Malus domestica HOM05D005265 ORTHO05D006326 4.0e-45 184.9 136 75.0
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 4.0e-45 184.9 132 76.5
Duzib248G0887 Durio zibethinus HOM05D005265 ORTHO05D006326 5.2e-45 184.5 130 74.6
BolC3t19927H Brassica oleracea HOM05D005265 ORTHO05D006326 6.8e-45 184.1 130 75.4
SGA_v2.0_scaffold223G42844 Striga asiatica HOM05D005265 ORTHO05D006326 6.8e-45 184.1 131 74.8
CDE01G0641 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 1.5e-44 183.0 129 71.3
BcaB07g32648 Brassica carinata HOM05D005265 ORTHO05D006326 2.0e-44 182.6 131 74.0
Duzib052G0655 Durio zibethinus HOM05D005265 ORTHO05D006326 2.0e-44 182.6 131 74.0
Aa31LG6G5400 Aethionema arabicum HOM05D005265 ORTHO05D006326 2.6e-44 182.2 132 73.5
PSO541G2745 Papaver somniferum HOM05D005265 ORTHO05D006326 2.6e-44 182.2 129 72.9
PSO675G1042 Papaver somniferum HOM05D005265 ORTHO05D006326 2.6e-44 182.2 129 72.9
AUR62038135 Chenopodium quinoa HOM05D005265 ORTHO05D006326 4.4e-44 181.4 131 74.0
TWI09G0405 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 5.8e-44 181.0 132 72.0
CDE12G0489 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 7.5e-44 180.6 129 70.5
MELO3C007091.2 Cucumis melo HOM05D005265 ORTHO05D006326 7.5e-44 180.6 131 73.3
unitig_61.g26080 Utricularia gibba HOM05D005265 ORTHO05D006326 7.5e-44 180.6 126 74.6
Sed0026922 Sechium edule HOM05D005265 ORTHO05D006326 9.8e-44 180.3 132 74.2
CsaV3_6G052210 Cucumis sativus L. HOM05D005265 ORTHO05D006326 1.7e-43 179.5 129 73.6
AUR62009823 Chenopodium quinoa HOM05D005265 ORTHO05D006326 2.9e-43 178.7 131 73.3
Potri.018G027600 Populus trichocarpa HOM05D005265 ORTHO05D006326 6.4e-43 177.6 122 77.0
TPR.G24497 Trifolium pratense HOM05D005265 ORTHO05D006326 8.3e-43 177.2 133 74.4
TWI73G0862 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 1.4e-42 176.4 132 71.2
MBI02_g44634_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 1.9e-42 176.0 129 72.1
Lalb_Chr23g0275991 Lupinus albus HOM05D005265 ORTHO05D006326 7.0e-42 174.1 106 83.0
MBI02_g40641_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 9.2e-42 173.7 129 71.3
HPP92_019500 Vanilla planifolia HOM05D005265 ORTHO05D006326 9.2e-42 173.7 129 72.9
Psat0s1315g0080 Pisum sativum HOM05D005265 ORTHO05D006326 1.2e-41 173.3 163 61.3
Ah.08g216220 Amaranthus hybridus HOM05D000506 ORTHO05D000369 1.6e-41 172.9 123 71.5
FAN21G2293 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.6e-41 172.9 104 83.7
Zm00001eb299990 Zea mays HOM05D005265 ORTHO05D006326 2.0e-41 172.6 132 70.5
Os07g0148900 Oryza sativa ssp. japonica HOM05D005265 ORTHO05D006326 6.0e-41 171.0 123 71.5
ATR0681G400 Amborella trichopoda HOM05D005265 ORTHO05D006326 5.0e-40 167.9 122 73.0
Hund18717 Selenicereus undatus HOM05D005265 ORTHO05D006326 4.3e-39 164.9 136 66.2
SEGI_05857 Sequoiadendron giganteum HOM05D005265 ORTHO05D006326 1.1e-37 160.2 123 66.7
Sp4g16930 Schrenkiella parvula HOM05D005265 ORTHO05D006326 5.8e-36 154.5 122 68.0
Pp3c3_10740 Physcomitrium patens HOM05D005265 ORTHO05D006326 2.2e-35 152.5 126 65.1
Mapoly0125s0033 Marchantia polymorpha HOM05D005265 ORTHO05D006326 3.7e-35 151.8 130 62.3
Pp3c13_10540 Physcomitrium patens HOM05D005265 ORTHO05D006326 3.7e-35 151.8 123 62.6
Nn3g20272 Nelumbo nucifera HOM05D005265 ORTHO05D006326 4.1e-34 148.3 128 66.4
Nn4g26654 Nelumbo nucifera HOM05D005265 ORTHO05D006326 2.7e-33 145.6 128 67.2
Pp3c13_10520 Physcomitrium patens HOM05D005265 ORTHO05D006326 3.6e-30 135.2 129 56.6
AagrBONN_evm.TU.Sc2ySwM_369.184 Anthoceros agrestis HOM05D005265 ORTHO05D006326 9.9e-28 127.1 119 58.0
CBR_g39729 Chara braunii HOM05D005265 ORTHO05D006326 1.6e-22 109.8 127 48.0
SMO358G0410 Selaginella moellendorffii HOM05D005265 ORTHO05D006326 1.5e-20 103.2 75 70.7
Cre17.g724300 Chlamydomonas reinhardtii HOM05D005265 ORTHO05D006326 9.9e-20 100.5 104 51.9
Nn8g40769 Nelumbo nucifera HOM05D005265 ORTHO05D006326 2.8e-14 82.4 67 61.2
RcHm_v2.0_Chr5g0036151 Rosa chinensis HOM05D005265 ORTHO05D006326 9.0e-13 77.4 48 81.2
PRCOL_00005455 Prasinoderma coloniale HOM05D005265 ORTHO05D006326 1.2e-09 67.0 92 41.3
MCO04G068 Micromonas commoda HOM05D005265 ORTHO05D006326 6.0e-09 64.7 78 44.9


User provided reference genes

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