Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03384 Vaccinium macrocarpon HOM05D000169 ORTHO05D007693 1.6e-64 249.2 121 100.0
vmacro03452 Vaccinium macrocarpon HOM05D000169 ORTHO05D007693 1.7e-61 239.2 118 98.3
Rhsim13G0121500 Rhododendron simsii HOM05D000169 ORTHO05D007693 3.8e-50 201.4 118 83.1
Actinidia33686 Actinidia chinensis HOM05D000169 ORTHO05D007693 2.5e-41 172.2 118 67.8
Haze_05866 Corylus avellana HOM05D000169 ORTHO05D007693 7.2e-41 170.6 117 65.8
CSS0003732 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D007693 1.6e-40 169.5 118 69.5
Lj2C330T2 Lonicera japonica HOM05D000169 ORTHO05D007693 3.4e-38 161.8 118 64.4
TWI15G0677 Tripterygium wilfordii HOM05D000169 ORTHO05D007693 4.4e-38 161.4 118 62.7
Solyc02g069920.4 Solanum lycopersicum HOM05D000169 ORTHO05D007693 9.8e-38 160.2 118 62.7
Nitab4.5_0001225g0090 Nicotiana tabacum HOM05D000169 ORTHO05D007693 1.7e-37 159.5 118 61.9
Sopen02g019060 Solanum pennellii HOM05D000169 ORTHO05D007693 2.2e-37 159.1 118 62.7
Thecc.06G002500 Theobroma cacao HOM05D000169 ORTHO05D007693 3.7e-37 158.3 118 61.9
Ciclev10017814m.g Citrus clementina HOM05D000169 ORTHO05D007693 4.9e-37 157.9 118 60.2
TAR627G0736 Trochodendron aralioides HOM05D000169 ORTHO05D007693 4.9e-37 157.9 118 63.6
CAN.G79.33 Capsicum annuum HOM05D000169 ORTHO05D007693 6.3e-37 157.5 118 63.6
GSVIVG01021658001 Vitis vinifera HOM05D000169 ORTHO05D007693 8.3e-37 157.1 118 61.0
MSTRG.16293 Avicennia marina HOM05D000169 ORTHO05D007693 1.1e-36 156.8 117 63.2
Atru.chr10.844 Acer truncatum HOM05D000169 ORTHO05D007693 4.1e-36 154.8 118 59.3
CiPaw.09G141800 Carya illinoinensis HOM05D000169 ORTHO05D007693 4.1e-36 154.8 118 59.3
Nitab4.5_0001583g0010 Nicotiana tabacum HOM05D000169 ORTHO05D007693 5.4e-36 154.5 118 60.2
Potri.011G164100 Populus trichocarpa HOM05D000169 ORTHO05D007693 7.0e-36 154.1 118 61.0
RcHm_v2.0_Chr5g0016071 Rosa chinensis HOM05D000169 ORTHO05D007693 4.5e-35 151.4 118 59.3
MBI18_g11294_MAGBIO Magnolia biondii HOM05D000169 ORTHO05D007693 5.9e-35 151.0 118 55.9
Duzib235G0404 Durio zibethinus HOM05D000169 ORTHO05D007693 2.3e-34 149.1 118 60.2
Eucgr.D00173 Eucalyptus grandis HOM05D000169 ORTHO05D007693 2.3e-34 149.1 118 56.8
QL05p062500 Quercus lobata HOM05D000169 ORTHO05D007693 2.9e-34 148.7 117 59.8
Cc09_g04180 Coffea canephora HOM05D000169 ORTHO05D007693 3.8e-34 148.3 108 61.1
Nn4g26677 Nelumbo nucifera HOM05D000356 ORTHO05D007693 3.8e-34 148.3 119 59.7
Gohir.A05G110600 Gossypium hirsutum HOM05D000169 ORTHO05D007693 6.6e-34 147.5 118 59.3
Gohir.D05G111000 Gossypium hirsutum HOM05D000169 ORTHO05D007693 8.6e-34 147.1 118 59.3
Gorai.009G115300 Gossypium raimondii HOM05D000169 ORTHO05D007693 8.6e-34 147.1 118 59.3
Aqoxy1G00111 Aquilegia oxysepala HOM05D000356 ORTHO05D007693 1.9e-33 146.0 118 58.5
Migut.H01327 Erythranthe guttata HOM05D000169 ORTHO05D007693 1.9e-33 146.0 119 58.8
Glyma.09G024500 Glycine max HOM05D000169 ORTHO05D007693 1.9e-33 146.0 118 56.8
Lalb_Chr20g0120061 Lupinus albus HOM05D000169 ORTHO05D007693 1.9e-33 146.0 118 56.8
FAN16G2954 Fragaria x ananassa HOM05D000169 ORTHO05D007693 2.5e-33 145.6 118 57.6
Peaxi162Scf00276g00122 Petunia axillaris HOM05D000169 ORTHO05D007693 3.3e-33 145.2 118 59.3
Glyma.15G130500 Glycine max HOM05D000169 ORTHO05D007693 4.3e-33 144.8 118 55.1
Manes.03G112150 Manihot esculenta HOM05D000169 ORTHO05D007693 4.3e-33 144.8 118 55.1
CiPaw.10G109200 Carya illinoinensis HOM05D000169 ORTHO05D007693 5.6e-33 144.4 118 55.1
Oeu008957.2 Olea europaea HOM05D000169 ORTHO05D007693 9.5e-33 143.7 107 61.7
FAN11G3594 Fragaria x ananassa HOM05D000169 ORTHO05D007693 1.2e-32 143.3 118 56.8
VMungo0540G1641 Vigna mungo HOM05D000169 ORTHO05D007693 1.2e-32 143.3 123 56.1
FAN25G2274 Fragaria x ananassa HOM05D000169 ORTHO05D007693 2.1e-32 142.5 118 56.8
Prupe.4G090600 Prunus persica HOM05D000169 ORTHO05D007693 2.1e-32 142.5 118 56.8
Phvul.006G128100 Phaseolus vulgaris HOM05D000169 ORTHO05D007693 2.8e-32 142.1 118 57.6
Sc10g0005430 Simmondsia chinensis HOM05D000169 ORTHO05D007693 4.7e-32 141.4 118 55.1
Sc10g0006290 Simmondsia chinensis HOM05D000169 ORTHO05D007693 4.7e-32 141.4 118 55.1
CANSAT35G1370 Cannabis sativa HOM05D000169 ORTHO05D007693 6.1e-32 141.0 118 54.2
CDE06G2571 Ceratophyllum demersum HOM05D000169 ORTHO05D007693 1.0e-31 140.2 117 55.6
MD10G1252900 Malus domestica HOM05D000169 ORTHO05D007693 1.0e-31 140.2 118 55.9
ECA236G2888 Erigeron canadensis HOM05D000169 ORTHO05D007693 1.4e-31 139.8 118 55.9
FvH4_3g10160 Fragaria vesca HOM05D000169 ORTHO05D007693 1.8e-31 139.4 118 55.9
SalBow7G0208 Salvia bowleyana HOM05D000169 ORTHO05D007693 6.8e-31 137.5 118 50.8
Medtr2g030240 Medicago truncatula HOM05D000356 ORTHO05D007693 1.2e-30 136.7 118 53.4
CDE03G0252 Ceratophyllum demersum HOM05D000169 ORTHO05D007693 1.5e-30 136.3 117 53.0
unitig_21.g20626 Utricularia gibba HOM05D000169 ORTHO05D007693 3.4e-30 135.2 115 56.5
Ca_00844_v3 Cicer arietinum L. HOM05D000169 ORTHO05D007693 4.4e-30 134.8 118 52.5
PSO675G5523 Papaver somniferum HOM05D000169 ORTHO05D007693 4.4e-30 134.8 119 51.3
Sp1g26370 Schrenkiella parvula HOM05D000169 ORTHO05D007693 7.5e-30 134.0 118 54.2
THA.LOC104812864 Tarenaya hassleriana HOM05D000356 ORTHO05D007693 9.8e-30 133.7 118 53.4
THA.LOC104814347 Tarenaya hassleriana HOM05D000356 ORTHO05D007693 9.8e-30 133.7 118 53.4
EL10Ac1g01132 Beta vulgaris HOM05D000169 ORTHO05D007693 1.3e-29 133.3 118 54.2
Aa31LG6G11770 Aethionema arabicum HOM05D000169 ORTHO05D007693 1.7e-29 132.9 120 52.5
HanXRQChr04g0116481 Helianthus annuus HOM05D000169 ORTHO05D007693 1.7e-29 132.9 118 50.8
PGR083G1101 Punica granatum HOM05D000169 ORTHO05D007693 2.9e-29 132.1 118 50.8
TPR.G26348 Trifolium pratense HOM05D000169 ORTHO05D007693 2.9e-29 132.1 118 50.8
arahy.Tifrunner.gnm1.ann1.T5Y52R Arachis hypogaea HOM05D000169 ORTHO05D007693 3.7e-29 131.7 118 50.8
Lj6g0025648 Lotus japonicus HOM05D000169 ORTHO05D007693 6.4e-29 131.0 118 53.4
AL1G44564 Arabidopsis lyrata HOM05D000169 ORTHO05D007693 8.3e-29 130.6 120 53.3
Carub.0001s2876 Capsella rubella HOM05D000169 ORTHO05D007693 8.3e-29 130.6 120 52.5
Thhalv10007264m.g Eutrema salsugineum HOM05D000169 ORTHO05D007693 8.3e-29 130.6 118 52.5
A09p35920 Brassica napus HOM05D000169 ORTHO05D007693 1.4e-28 129.8 118 51.7
BraA09t39117Z Brassica rapa HOM05D000169 ORTHO05D007693 1.4e-28 129.8 118 51.7
PSO675G1789 Papaver somniferum HOM05D000169 ORTHO05D007693 1.8e-28 129.4 119 50.4
arahy.Tifrunner.gnm1.ann1.D0AYNK Arachis hypogaea HOM05D000169 ORTHO05D007693 2.4e-28 129.0 118 50.0
C05p29540 Brassica napus HOM05D000169 ORTHO05D007693 5.4e-28 127.9 118 51.7
BolC5t31685H Brassica oleracea HOM05D000169 ORTHO05D007693 5.4e-28 127.9 118 51.7
Sed0014236 Sechium edule HOM05D000169 ORTHO05D007693 5.4e-28 127.9 119 52.1
CARHR029940 Cardamine hirsuta HOM05D000169 ORTHO05D007693 2.0e-27 125.9 118 52.5
BcaB07g32664 Brassica carinata HOM05D000356 ORTHO05D007693 4.6e-27 124.8 118 50.0
BcaB07g32688 Brassica carinata HOM05D000169 ORTHO05D007693 5.9e-27 124.4 117 49.6
ClCG01G025170 Citrullus lanatus HOM05D000169 ORTHO05D007693 5.9e-27 124.4 119 54.6
Sabra11G0141000 Salix brachista HOM05D002312 ORTHO05D006455 5.9e-27 124.4 108 52.8
Zm00001eb261830 Zea mays HOM05D000169 ORTHO05D007693 1.0e-26 123.6 118 49.2
AT1G30520 Arabidopsis thaliana HOM05D000169 ORTHO05D007693 1.3e-26 123.2 118 49.2
MELO3C007073.2 Cucumis melo HOM05D000169 ORTHO05D007693 1.3e-26 123.2 120 53.3
DCAR_004840 Daucus carota HOM05D000169 ORTHO05D007693 6.6e-26 120.9 103 52.4
Ah.04g153410 Amaranthus hybridus HOM05D000169 ORTHO05D007693 1.9e-25 119.4 117 48.7
Lsat_1_v5_gn_7_27381 Lactuca sativa HOM05D000169 ORTHO05D007693 9.5e-25 117.1 112 47.3
Cfa000807 Carpinus fangiana HOM05D000169 ORTHO05D007693 2.1e-24 115.9 118 49.2
Dinv10791 Davidia involucrata HOM05D000169 ORTHO05D007693 7.5e-22 107.5 76 67.1
BcaC05g27073 Brassica carinata HOM05D000169 ORTHO05D007693 2.4e-20 102.4 95 49.5
SEGI_10060 Sequoiadendron giganteum HOM05D000169 ORTHO05D007693 5.4e-20 101.3 112 43.8
COL.COLO4_26837 Corchorus olitorius HOM05D000169 ORTHO05D007693 3.9e-18 95.1 76 56.6
SGA_v2.0_scaffold51G18657 Striga asiatica HOM05D004088 ORTHO05D007693 2.1e-16 89.4 74 51.4
FAN21G3676 Fragaria x ananassa HOM05D000169 ORTHO05D007693 2.8e-16 89.0 84 48.8
Mapoly0097s0040 Marchantia polymorpha HOM05D000356 ORTHO05D007693 3.6e-16 88.6 102 39.2
SMO119G0066 Selaginella moellendorffii HOM05D000169 ORTHO05D007693 1.1e-15 87.0 102 43.1
Pp3c10_3810 Physcomitrium patens HOM05D000169 ORTHO05D007693 1.4e-15 86.7 114 39.5
Hund19369 Selenicereus undatus HOM05D000169 ORTHO05D007693 3.4e-14 82.0 77 49.4
PGSC0003DMG400021188 Solanum tuberosum HOM05D000169 ORTHO05D007693 5.8e-14 81.3 50 66.0
ATR0165G033 Amborella trichopoda HOM05D000169 ORTHO05D007693 2.2e-13 79.3 78 44.9
Psat1g167440 Pisum sativum HOM05D000169 ORTHO05D007693 6.4e-13 77.8 76 46.1
DCAR_004839 Daucus carota HOM05D000169 ORTHO05D007693 1.1e-09 67.0 45 62.2
AUR62029373 Chenopodium quinoa HOM05D000169 ORTHO05D007693 5.6e-09 64.7 44 56.8
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 6.2e-08 61.2 44 54.5
MD05G1272800 Malus domestica HOM05D000169 ORTHO05D007693 1.4e-07 60.1 45 60.0
MELO3C016565.2 Cucumis melo HOM05D000169 ORTHO05D004780 2.3e-07 59.3 107 34.6
HanXRQChr13g0426451 Helianthus annuus HOM05D000169 ORTHO05D007693 6.8e-07 57.8 44 54.5
HanXRQChr12g0365601 Helianthus annuus HOM05D000356 ORTHO05D000265 2.6e-06 55.8 117 32.5
ECA238G3512 Erigeron canadensis HOM05D000356 ORTHO05D000265 5.8e-06 54.7 103 34.0
ECA238G0022 Erigeron canadensis HOM05D000356 ORTHO05D000265 7.6e-06 54.3 111 34.2
Glyma.07G019100 Glycine max HOM05D000169 ORTHO05D004780 9.9e-06 53.9 107 31.8


User provided reference genes

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