Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 3.0e-207 725.3 470 100.0
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 5.9e-147 525.0 529 74.1
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 5.6e-97 359.0 375 57.9
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.4e-92 344.4 524 55.7
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 6.8e-79 298.9 486 56.0
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.1e-63 248.4 314 48.4
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 4.5e-62 243.0 527 44.6
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.6e-59 234.6 318 48.4
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 5.6e-57 226.1 516 46.3
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 6.2e-56 222.6 480 49.8
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 8.1e-56 222.2 648 40.1
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 1.7e-53 214.5 317 44.8
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 4.9e-53 213.0 185 65.4
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 1.0e-50 205.3 321 47.0
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 3.0e-50 203.8 502 40.4
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 3.3e-49 200.3 524 37.6
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 5.7e-49 199.5 491 46.2
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.1e-47 193.7 488 44.1
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 5.3e-47 193.0 480 46.7
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 6.9e-47 192.6 477 45.3
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.2e-46 191.8 510 42.2
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 1.2e-46 191.8 478 46.4
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.5e-46 191.4 474 43.0
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 2.0e-46 191.0 540 38.5
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 5.0e-45 186.4 521 42.6
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 8.4e-45 185.7 494 41.7
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 1.1e-44 185.3 493 41.4
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 1.1e-44 185.3 512 42.4
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.5e-44 184.1 495 44.6
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 3.5e-43 180.3 378 37.8
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 7.9e-43 179.1 473 42.1
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 1.0e-42 178.7 477 43.6
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 1.5e-41 174.9 230 50.0
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 3.3e-41 173.7 496 43.3
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 7.4e-41 172.6 491 38.3
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 6.3e-40 169.5 256 43.4
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 6.3e-40 169.5 473 41.6
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 1.1e-39 168.7 510 39.6
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 5.3e-39 166.4 505 41.8
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 4.5e-38 163.3 498 43.6
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.0e-37 162.2 535 38.7
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 1.3e-37 161.8 472 42.4
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 2.2e-37 161.0 476 40.5
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 2.2e-37 161.0 535 37.8
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 2.9e-37 160.6 529 38.8
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 2.5e-36 157.5 319 38.6
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 9.4e-36 155.6 475 44.6
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 9.4e-36 155.6 301 39.5
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 1.8e-34 151.4 287 38.3
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 5.1e-34 149.8 516 40.5
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 6.7e-34 149.4 275 40.7
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.3e-33 147.1 498 37.6
Actinidia24231 Actinidia chinensis HOM05D007535 ORTHO05D008520 4.3e-33 146.7 161 53.4
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 5.7e-33 146.4 275 40.4
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 9.7e-33 145.6 253 42.7
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.4e-31 141.7 497 38.6
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 3.4e-30 137.1 496 40.1
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 1.3e-29 135.2 253 40.3
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 6.5e-29 132.9 501 38.1
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 6.5e-29 132.9 491 38.3
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 6.5e-29 132.9 524 34.5
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.1e-28 132.1 104 66.3
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 5.5e-28 129.8 468 37.2
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 5.5e-28 129.8 245 40.0
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 2.7e-27 127.5 267 33.7
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 3.6e-27 127.1 494 37.9
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.6e-27 127.1 493 37.9
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 4.7e-27 126.7 271 36.5
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 2.3e-26 124.4 414 30.0
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 6.7e-26 122.9 493 37.7
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.1e-25 122.1 371 32.9
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.1e-25 122.1 250 37.6
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 1.5e-25 121.7 495 37.0
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 4.4e-25 120.2 250 36.4
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 7.4e-25 119.4 270 35.9
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.8e-24 117.5 288 35.4
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 1.8e-23 114.8 300 31.3
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 2.4e-23 114.4 310 31.3
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 4.1e-23 113.6 334 34.7
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 9.1e-23 112.5 509 37.1
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 1.5e-22 111.7 502 36.5
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 8.5e-21 105.9 521 35.3
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 8.5e-21 105.9 474 36.7
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 3.2e-20 104.0 470 31.9
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 7.2e-20 102.8 494 36.6
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 9.7e-17 92.4 228 34.6
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 2.2e-16 91.3 251 31.5
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.4e-15 88.6 274 31.8
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 2.4e-15 87.8 270 32.2
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 4.1e-15 87.0 488 33.8
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 2.6e-14 84.3 173 35.8
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 1.7e-13 81.6 255 31.0
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 3.8e-13 80.5 495 35.2
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.9e-12 78.2 95 48.4
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 2.5e-12 77.8 262 29.8
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 3.2e-12 77.4 48 75.0
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 9.4e-12 75.9 253 30.0
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 9.4e-12 75.9 48 79.2
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 1.6e-11 75.1 263 27.8
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 2.1e-11 74.7 79 51.9
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 8.0e-11 72.8 257 29.6
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 8.0e-11 72.8 79 50.6
PRCOL_00004573 Prasinoderma coloniale HOM05D007535 ORTHO05D008520 1.0e-10 72.4 176 33.5
Mapoly0097s0057 Marchantia polymorpha HOM05D022173 ORTHO05D008520 1.2e-09 68.9 260 26.9
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 2.0e-09 68.2 42 78.6
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 5.7e-09 66.6 258 29.1
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 7.5e-09 66.2 258 28.3
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 1.3e-08 65.5 259 27.4
A10p18500 Brassica napus HOM05D012474 ORTHO05D008520 2.2e-08 64.7 257 26.1
BraA10t43930Z Brassica rapa HOM05D012474 ORTHO05D008520 2.2e-08 64.7 257 26.1
AT5G22320 Arabidopsis thaliana HOM05D012474 ORTHO05D008520 1.8e-07 61.6 74 47.3
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 2.4e-07 61.2 194 30.4
Sc12g0007950 Simmondsia chinensis HOM05D004562 ORTHO05D005435 3.1e-07 60.8 101 42.6
CANSAT78G2361 Cannabis sativa HOM05D000107 ORTHO05D000062 4.1e-07 60.5 39 69.2
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 5.4e-07 60.1 250 26.4
EL10Ac8g19501 Beta vulgaris HOM05D004562 ORTHO05D005435 7.0e-07 59.7 109 40.4
CSS0011895 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 7.0e-07 59.7 39 76.9
AUR62033795 Chenopodium quinoa HOM05D004562 ORTHO05D005435 4.5e-06 57.0 109 40.4


User provided reference genes

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