Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.3e-91 339.7 177 100.0
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 6.2e-65 251.1 153 85.6
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 4.4e-55 218.4 149 75.8
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 5.1e-51 204.9 151 74.2
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 2.8e-49 199.1 127 80.3
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.4e-48 196.1 126 78.6
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.2e-47 193.7 127 77.2
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.5e-47 193.4 134 74.6
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 4.4e-47 191.8 148 69.6
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 7.6e-47 191.0 125 79.2
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 9.9e-47 190.7 153 69.3
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.3e-46 190.3 125 78.4
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 8.4e-46 187.6 134 73.9
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.9e-45 186.4 152 67.1
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.4e-45 186.0 128 75.0
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 2.4e-45 186.0 120 80.0
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 3.2e-45 185.7 128 74.2
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 7.1e-45 184.5 125 74.4
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.2e-44 183.7 128 73.4
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 2.1e-44 183.0 129 76.0
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.6e-44 181.8 132 72.7
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 7.8e-44 181.0 137 70.1
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.0e-43 180.6 141 65.2
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 1.0e-43 180.6 150 67.3
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.3e-43 180.3 120 77.5
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.7e-43 179.9 137 70.8
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.7e-43 179.9 125 71.2
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 2.3e-43 179.5 132 71.2
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 3.0e-43 179.1 122 70.5
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 5.1e-43 178.3 126 71.4
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.1e-42 177.2 130 71.5
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.1e-42 177.2 120 72.5
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.1e-42 177.2 153 64.7
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 1.5e-42 176.8 128 71.9
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.9e-42 176.4 125 71.2
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.9e-42 176.4 125 71.2
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.9e-42 176.4 135 70.4
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.9e-42 176.4 125 72.0
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.9e-42 176.4 122 69.7
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 4.3e-42 175.3 130 73.1
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 4.3e-42 175.3 139 65.5
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 4.3e-42 175.3 119 73.9
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 9.6e-42 174.1 119 73.1
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.3e-41 173.7 149 64.4
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.3e-41 173.7 125 69.6
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.6e-41 173.3 125 69.6
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 2.8e-41 172.6 114 78.9
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 2.8e-41 172.6 120 71.7
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 3.6e-41 172.2 132 69.7
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 6.2e-41 171.4 132 68.9
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 6.2e-41 171.4 114 78.1
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 6.2e-41 171.4 132 68.9
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 6.2e-41 171.4 132 68.9
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 6.2e-41 171.4 114 78.1
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 6.2e-41 171.4 128 70.3
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.8e-40 169.9 143 65.7
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.8e-40 169.9 111 80.2
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 4.0e-40 168.7 123 70.7
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 5.3e-40 168.3 120 70.0
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 1.5e-39 166.8 111 77.5
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 1.5e-39 166.8 102 78.4
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 5.8e-39 164.9 131 67.9
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 5.8e-39 164.9 125 69.6
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 9.9e-39 164.1 135 65.2
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.3e-38 163.7 128 71.1
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 1.7e-38 163.3 125 69.6
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 3.8e-38 162.2 128 69.5
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 1.1e-37 160.6 141 63.8
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.1e-37 160.6 123 66.7
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 4.2e-37 158.7 141 63.8
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 4.2e-37 158.7 119 68.1
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.6e-36 156.8 156 55.8
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 1.7e-35 153.3 118 66.9
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 6.6e-35 151.4 128 61.7
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 7.3e-34 147.9 95 75.8
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 9.6e-34 147.5 126 59.5
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 8.1e-33 144.4 120 65.8
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 4.0e-32 142.1 120 65.8
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 5.8e-31 138.3 152 52.6
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 9.9e-31 137.5 99 74.7
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 9.9e-31 137.5 99 72.7
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 4.9e-30 135.2 108 66.7
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 8.4e-30 134.4 125 56.8
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.9e-29 133.3 101 69.3
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 2.7e-28 129.4 94 73.4
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.5e-28 129.0 139 55.4
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 2.5e-26 122.9 100 64.0
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.4e-24 117.1 118 60.2
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 1.8e-24 116.7 127 51.2
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.4e-24 116.3 90 65.6
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.2e-23 114.0 95 67.4
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 1.3e-22 110.5 71 64.8
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 1.7e-22 110.2 96 53.1
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.2e-20 104.0 113 49.6
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 2.1e-20 103.2 119 47.1
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 8.7e-19 97.8 115 45.2
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.5e-18 97.1 153 43.8
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 2.4e-16 89.7 116 48.3
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 9.0e-16 87.8 123 44.7
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 1.3e-14 84.0 95 56.8
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 8.4e-14 81.3 118 41.5
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 8.4e-14 81.3 118 41.5
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 3.2e-13 79.3 177 35.0
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.1e-12 76.6 64 62.5
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 6.1e-12 75.1 120 42.5
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 8.7e-11 71.2 118 40.7


User provided reference genes

Program Settings