Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 0.0e+00 1136.7 602 100.0
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 6.3e-178 628.2 515 67.4
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 6.3e-178 628.2 600 62.5
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 5.7e-171 605.1 463 75.8
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 1.7e-154 550.4 578 54.7
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.0e-151 541.2 554 56.9
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.7e-143 513.8 564 52.3
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 3.3e-142 509.6 595 51.8
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.0e-139 500.4 549 54.5
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 4.9e-138 495.7 566 51.8
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 6.4e-138 495.4 561 51.5
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 7.8e-136 488.4 563 51.0
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 3.3e-134 483.0 568 51.2
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 7.3e-134 481.9 565 52.4
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.1e-133 480.3 566 50.4
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 1.1e-132 478.0 562 50.5
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 1.8e-132 477.2 557 52.2
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 4.0e-132 476.1 563 49.6
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.2e-131 474.6 564 50.2
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.5e-131 474.2 568 51.2
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 2.6e-131 473.4 566 49.3
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 5.8e-131 472.2 567 48.0
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 7.6e-131 471.9 554 50.9
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.7e-130 470.7 556 52.0
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 2.2e-130 470.3 602 47.5
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 2.9e-130 469.9 587 48.2
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 4.1e-129 466.1 554 49.3
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 5.4e-129 465.7 563 51.0
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 2.1e-128 463.8 568 48.8
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 6.0e-128 462.2 531 53.7
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.3e-127 461.1 563 49.2
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.5e-126 457.6 561 49.0
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 2.5e-126 456.8 565 48.3
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 4.3e-126 456.1 565 48.5
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.2e-125 454.5 562 49.5
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 2.1e-125 453.8 565 48.8
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 2.1e-125 453.8 568 49.5
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.8e-125 453.4 581 49.4
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.8e-124 450.7 503 53.7
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.2e-123 448.0 592 48.1
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 2.0e-123 447.2 591 46.2
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 4.4e-123 446.0 586 47.3
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 2.2e-122 443.7 565 47.6
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 2.2e-122 443.7 621 45.7
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 6.4e-122 442.2 561 48.7
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 6.4e-122 442.2 595 47.9
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 3.2e-121 439.9 511 51.1
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 6.0e-120 435.6 570 48.1
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 8.7e-119 431.8 566 48.4
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.5e-118 431.0 566 45.4
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 2.5e-118 430.3 583 47.2
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 5.6e-118 429.1 591 47.2
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 1.6e-117 427.6 573 46.2
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 6.2e-117 425.6 569 45.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 2.4e-116 423.7 520 50.0
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 9.0e-116 421.8 551 48.3
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 2.9e-114 416.8 565 47.4
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 6.4e-114 415.6 618 45.0
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 8.4e-114 415.2 572 44.4
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 8.4e-114 415.2 467 50.5
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.1e-113 414.8 560 45.7
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 2.4e-113 413.7 580 45.7
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 7.1e-113 412.1 545 45.0
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 7.1e-113 412.1 564 46.5
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.2e-112 411.4 517 48.2
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.7e-112 410.2 581 45.6
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 4.6e-112 409.5 556 46.2
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 7.9e-112 408.7 556 45.5
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.0e-111 408.3 558 46.1
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.0e-111 408.3 589 44.5
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 5.1e-111 406.0 549 45.7
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 8.7e-111 405.2 557 46.0
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.1e-110 404.8 573 45.5
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 4.3e-110 402.9 589 45.5
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 4.3e-110 402.9 393 58.8
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 2.8e-109 400.2 564 45.6
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.6e-109 399.8 451 51.4
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.6e-109 399.8 451 51.4
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 7.6e-107 392.1 561 44.4
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 9.9e-107 391.7 558 44.6
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 3.8e-106 389.8 593 42.7
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.9e-106 389.4 439 53.3
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 4.2e-105 386.3 560 45.0
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 6.0e-104 382.5 560 44.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 7.9e-104 382.1 571 42.9
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 3.3e-102 376.7 590 42.9
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 1.3e-101 374.8 542 44.3
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 2.4e-100 370.5 555 45.8
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 7.6e-99 365.5 577 41.9
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 4.8e-85 319.7 582 39.2
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 3.1e-84 317.0 368 48.1
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.4e-81 308.1 489 41.1
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 1.8e-79 301.2 437 46.0
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 2.6e-78 297.4 541 39.0
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.7e-74 284.6 579 36.3
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.5e-73 280.8 579 35.9
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 5.3e-68 263.1 538 37.2
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 2.2e-61 241.1 551 33.9
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 2.7e-59 234.2 601 31.8
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 2.2e-58 231.1 228 56.1
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 2.3e-55 221.1 589 31.1
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 7.5e-54 216.1 382 37.4
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 2.4e-52 211.1 160 72.5
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.4e-47 195.3 432 32.2
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 1.6e-43 181.8 225 47.1
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.7e-42 178.3 226 50.9
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 6.6e-42 176.4 393 32.1
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.7e-37 161.8 228 43.0
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 2.2e-37 161.4 235 44.7
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 2.2e-37 161.4 273 38.5
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 2.3e-34 151.4 239 44.8
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 3.6e-24 117.5 207 36.7
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 7.1e-20 103.2 140 45.7
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.2e-16 92.4 80 58.8
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 5.2e-15 87.0 65 73.8
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 1.2e-14 85.9 374 24.6
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.7e-10 72.0 87 54.0
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 7.3e-09 66.6 71 50.7
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.6e-08 65.5 123 37.4
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 6.9e-07 60.1 103 37.9
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.0e-06 58.5 89 38.2
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 2.6e-06 58.2 112 37.5


User provided reference genes

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