Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 8.0e-70 266.9 131 100.0
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.1e-63 246.5 131 93.1
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 1.5e-52 209.5 133 79.7
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.4e-50 203.0 128 75.0
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.4e-50 203.0 128 76.6
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 3.2e-50 201.8 128 76.6
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.2e-50 201.8 128 76.6
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 2.1e-49 199.1 128 75.0
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 1.0e-48 196.8 134 73.1
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.3e-48 196.4 128 75.8
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 6.6e-48 194.1 128 71.9
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 2.5e-47 192.2 136 71.3
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 7.3e-47 190.7 130 68.5
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 1.2e-46 189.9 134 69.4
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 3.6e-46 188.3 143 67.8
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.6e-46 188.3 128 74.2
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 3.1e-45 185.3 128 71.9
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 8.9e-45 183.7 130 70.8
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.2e-44 183.3 130 70.0
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 1.2e-44 183.3 130 69.2
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 2.0e-44 182.6 131 69.5
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 2.0e-44 182.6 128 68.0
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.6e-44 182.2 131 68.7
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.6e-44 182.2 128 66.4
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 9.9e-44 180.3 131 68.7
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 9.9e-44 180.3 128 64.8
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.7e-43 179.5 130 67.7
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 2.9e-43 178.7 130 67.7
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 3.8e-43 178.3 129 67.4
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 4.9e-43 177.9 133 66.2
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 4.9e-43 177.9 131 67.2
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 6.4e-43 177.6 130 70.8
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 8.4e-43 177.2 130 67.7
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 8.4e-43 177.2 130 67.7
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 8.4e-43 177.2 130 67.7
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 1.1e-42 176.8 130 67.7
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 1.1e-42 176.8 130 67.7
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.1e-42 176.8 128 67.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.4e-42 176.4 133 66.9
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 1.9e-42 176.0 165 58.2
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 2.4e-42 175.6 133 65.4
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 2.4e-42 175.6 134 68.7
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 2.4e-42 175.6 138 63.0
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 4.2e-42 174.9 129 69.8
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 4.2e-42 174.9 136 63.2
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 7.1e-42 174.1 130 66.2
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 7.1e-42 174.1 130 68.5
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 1.2e-41 173.3 132 65.9
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 1.6e-41 172.9 134 64.9
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 2.1e-41 172.6 135 66.7
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 6.0e-41 171.0 136 64.0
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 1.0e-40 170.2 129 65.1
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 2.3e-40 169.1 134 64.2
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 3.0e-40 168.7 130 66.2
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 3.9e-40 168.3 129 65.1
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 5.1e-40 167.9 129 66.7
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 5.1e-40 167.9 129 67.4
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 6.6e-40 167.5 133 66.2
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 8.7e-40 167.2 134 63.4
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 8.7e-40 167.2 134 62.7
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 2.5e-39 165.6 150 60.0
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 3.3e-39 165.2 134 61.9
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 3.3e-39 165.2 134 61.9
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 4.3e-39 164.9 129 65.9
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 9.6e-39 163.7 128 64.8
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.3e-38 163.3 128 63.3
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 4.8e-38 161.4 128 62.5
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.4e-37 159.8 138 59.4
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.4e-37 159.8 134 59.7
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 4.0e-37 158.3 128 61.7
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.5e-36 156.4 128 61.7
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 2.0e-36 156.0 137 57.7
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 2.9e-35 152.1 126 61.9
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 3.8e-35 151.8 134 59.7
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 2.4e-34 149.1 137 56.9
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 1.2e-33 146.7 102 67.6
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.6e-33 146.4 126 59.5
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 2.7e-33 145.6 128 60.9
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 7.9e-33 144.1 141 56.7
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 4.3e-31 138.3 97 71.1
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 2.0e-28 129.4 91 68.1
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 1.3e-27 126.7 118 53.4
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 1.4e-26 123.2 100 63.0
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 2.1e-25 119.4 99 65.7
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 2.7e-25 119.0 101 63.4
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 6.7e-24 114.4 131 45.0
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 6.7e-24 114.4 131 45.0
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.1e-23 113.6 93 55.9
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 7.4e-23 110.9 121 50.4
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 7.4e-23 110.9 129 50.4
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 1.3e-22 110.2 126 45.2
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.7e-22 108.6 95 57.9
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 1.8e-21 106.3 142 45.1
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 5.3e-21 104.8 92 58.7
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 2.6e-20 102.4 140 43.6
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 1.3e-19 100.1 144 43.1
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 6.5e-19 97.8 105 45.7
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.4e-18 96.7 94 53.2
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 3.2e-18 95.5 80 63.8
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.0e-16 90.5 78 57.7
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 6.7e-16 87.8 80 56.2
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 8.7e-16 87.4 101 48.5
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 1.3e-11 73.6 89 48.3
Actinidia14340 Actinidia chinensis HOM05D007233 ORTHO05D009043 7.2e-10 67.8 56 62.5
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.2e-09 67.0 97 41.2
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.2e-09 67.0 128 38.3
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 2.3e-08 62.8 65 49.2


User provided reference genes

Program Settings