Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03078 Vaccinium macrocarpon HOM05D003527 ORTHO05D004099 4.7e-137 491.1 237 100.0
Rhsim13G0083400 Rhododendron simsii HOM05D003527 ORTHO05D004099 3.7e-33 146.0 148 64.9
Ciclev10029234m.g Citrus clementina HOM05D003527 ORTHO05D004099 6.8e-19 98.6 109 52.3
Nitab4.5_0007604g0010 Nicotiana tabacum HOM05D003527 ORTHO05D004099 3.8e-17 92.8 163 41.1
Prupe.6G079000 Prunus persica HOM05D003527 ORTHO05D004099 4.9e-17 92.4 139 45.3
Dinv12411 Davidia involucrata HOM05D003527 ORTHO05D004099 6.4e-17 92.0 133 47.4
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 8.4e-17 91.7 123 47.2
CSS0044295 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 4.2e-16 89.4 122 50.0
Thecc.09G322900 Theobroma cacao HOM05D003527 ORTHO05D004099 4.2e-16 89.4 119 49.6
Potri.009G030100 Populus trichocarpa HOM05D003527 ORTHO05D004099 7.1e-16 88.6 123 46.3
TWI79G0031 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 7.1e-16 88.6 120 49.2
Nitab4.5_0001800g0180 Nicotiana tabacum HOM05D003527 ORTHO05D004099 9.3e-16 88.2 163 40.5
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 2.7e-15 86.7 162 44.4
Ah.08g219410 Amaranthus hybridus HOM05D003527 ORTHO05D004099 4.6e-15 85.9 138 42.8
Potri.001G238900 Populus trichocarpa HOM05D003527 ORTHO05D004099 4.6e-15 85.9 138 42.0
Actinidia23946 Actinidia chinensis HOM05D003527 ORTHO05D004099 7.8e-15 85.1 101 50.5
Actinidia08370 Actinidia chinensis HOM05D003527 ORTHO05D004099 1.3e-14 84.3 106 53.8
Peaxi162Scf00832g00018 Petunia axillaris HOM05D003527 ORTHO05D004099 1.3e-14 84.3 124 46.8
Gohir.A07G097950 Gossypium hirsutum HOM05D003527 ORTHO05D004099 2.3e-14 83.6 108 48.1
Gohir.D07G102300 Gossypium hirsutum HOM05D003527 ORTHO05D004099 2.3e-14 83.6 108 48.1
Manes.04G034300 Manihot esculenta HOM05D003527 ORTHO05D004099 3.0e-14 83.2 142 45.1
Gorai.001G110200 Gossypium raimondii HOM05D003527 ORTHO05D004099 3.9e-14 82.8 108 48.1
Sabra16G0144000 Salix brachista HOM05D003527 ORTHO05D004099 3.9e-14 82.8 123 45.5
Sc12g0001550 Simmondsia chinensis HOM05D003527 ORTHO05D004099 3.9e-14 82.8 115 46.1
Dinv16990 Davidia involucrata HOM05D003527 ORTHO05D004099 6.6e-14 82.0 150 44.7
Dinv42939 Davidia involucrata HOM05D003527 ORTHO05D004099 6.6e-14 82.0 150 44.7
Dinv43161 Davidia involucrata HOM05D003527 ORTHO05D004099 6.6e-14 82.0 150 44.7
GSVIVG01024982001 Vitis vinifera HOM05D003527 ORTHO05D004099 1.5e-13 80.9 106 49.1
EL10Ac7g16007 Beta vulgaris HOM05D003527 ORTHO05D004099 3.3e-13 79.7 110 46.4
AUR62001798 Chenopodium quinoa HOM05D003527 ORTHO05D004099 3.3e-13 79.7 96 47.9
TWI31G0174 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 3.3e-13 79.7 120 45.8
FAN16G0579 Fragaria x ananassa HOM05D003527 ORTHO05D004099 4.3e-13 79.3 101 50.5
FAN25G2547 Fragaria x ananassa HOM05D003527 ORTHO05D004099 5.6e-13 79.0 101 50.5
AUR62009585 Chenopodium quinoa HOM05D003527 ORTHO05D004099 9.6e-13 78.2 96 46.9
FvH4_3g35940 Fragaria vesca HOM05D003527 ORTHO05D004099 9.6e-13 78.2 101 49.5
FAN11G1093 Fragaria x ananassa HOM05D003527 ORTHO05D004099 9.6e-13 78.2 101 49.5
DCAR_005975 Daucus carota HOM05D003527 ORTHO05D004099 1.6e-12 77.4 109 48.6
MD11G1110500 Malus domestica HOM05D003527 ORTHO05D004099 2.1e-12 77.0 142 42.3
Sed0026502 Sechium edule HOM05D003527 ORTHO05D004099 3.6e-12 76.3 123 46.3
CAN.G327.10 Capsicum annuum HOM05D003527 ORTHO05D004099 4.8e-12 75.9 134 41.0
FAN21G2526 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.4e-11 74.3 131 42.0
PGSC0003DMG400000395 Solanum tuberosum HOM05D003527 ORTHO05D004099 1.4e-11 74.3 163 37.4
TAR633G1470 Trochodendron aralioides HOM05D003527 ORTHO05D004099 3.1e-11 73.2 95 46.3
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 3.1e-11 73.2 96 46.9
MD03G1096000 Malus domestica HOM05D003527 ORTHO05D004099 4.0e-11 72.8 142 40.8
Duzib168G1608 Durio zibethinus HOM05D003527 ORTHO05D004099 5.3e-11 72.4 109 47.7
Medtr2g096780 Medicago truncatula HOM05D003527 ORTHO05D004099 6.9e-11 72.0 130 40.8
ECA247G3528 Erigeron canadensis HOM05D003527 ORTHO05D004099 9.0e-11 71.6 116 45.7
Hund04968 Selenicereus undatus HOM05D003527 ORTHO05D004099 9.0e-11 71.6 93 45.2
Solyc11g066010.2 Solanum lycopersicum HOM05D003527 ORTHO05D004099 9.0e-11 71.6 163 37.4
Sopen11g025750 Solanum pennellii HOM05D003527 ORTHO05D004099 9.0e-11 71.6 163 37.4
RcHm_v2.0_Chr5g0064221 Rosa chinensis HOM05D003527 ORTHO05D004099 1.2e-10 71.2 91 50.5
Haze_24084 Corylus avellana HOM05D003527 ORTHO05D004099 4.4e-10 69.3 127 41.7
Lsat_1_v5_gn_8_75920 Lactuca sativa HOM05D003527 ORTHO05D004099 4.4e-10 69.3 130 42.3
MD04G1126900 Malus domestica HOM05D003527 ORTHO05D004099 4.4e-10 69.3 130 39.2
Cpa.g.sc81.162 Carica papaya HOM05D003527 ORTHO05D004099 5.8e-10 68.9 113 43.4
HanXRQChr05g0134511 Helianthus annuus HOM05D003527 ORTHO05D004099 7.6e-10 68.6 143 38.5
Gohir.D05G096200 Gossypium hirsutum HOM05D003527 ORTHO05D004099 9.9e-10 68.2 99 46.5
Gorai.009G099700 Gossypium raimondii HOM05D003527 ORTHO05D004099 9.9e-10 68.2 99 46.5
QL01p032299 Quercus lobata HOM05D003527 ORTHO05D004099 1.3e-09 67.8 115 42.6
Ciclev10012740m.g Citrus clementina HOM05D003527 ORTHO05D004099 2.2e-09 67.0 155 36.8
Aqoxy2G02103 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 2.9e-09 66.6 110 45.5
RcHm_v2.0_Chr3g0466801 Rosa chinensis HOM05D003527 ORTHO05D004099 4.9e-09 65.9 149 38.9
ClCG02G020230 Citrullus lanatus HOM05D003527 ORTHO05D004099 6.4e-09 65.5 96 42.7
CiPaw.13G095400 Carya illinoinensis HOM05D003527 ORTHO05D004099 8.4e-09 65.1 144 38.9
FvH4_6g13980 Fragaria vesca HOM05D003527 ORTHO05D004099 8.4e-09 65.1 150 40.0
ECA236G2982 Erigeron canadensis HOM05D003527 ORTHO05D004099 1.1e-08 64.7 146 40.4
Gohir.A05G096000 Gossypium hirsutum HOM05D003527 ORTHO05D004099 1.1e-08 64.7 99 46.5
Atru.chr3.3890 Acer truncatum HOM05D003527 ORTHO05D004099 1.9e-08 63.9 64 57.8
CANSAT35G0216 Cannabis sativa HOM05D003527 ORTHO05D004099 2.4e-08 63.5 94 43.6
Hund18916 Selenicereus undatus HOM05D003527 ORTHO05D004099 3.2e-08 63.2 98 42.9
COL.COLO4_18499 Corchorus olitorius HOM05D003527 ORTHO05D004099 4.2e-08 62.8 77 53.2
TPR.G34322 Trifolium pratense HOM05D003527 ORTHO05D004099 4.2e-08 62.8 131 40.5
MELO3C025924.2 Cucumis melo HOM05D003527 ORTHO05D004099 5.4e-08 62.4 96 41.7
FAN14G4675 Fragaria x ananassa HOM05D003527 ORTHO05D004099 5.4e-08 62.4 150 39.3
TWI74G0830 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 9.3e-08 61.6 127 41.7
FAN05G0377 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.2e-07 61.2 153 39.9
FAN09G3248 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.2e-07 61.2 153 39.9
FAN02G4097 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.6e-07 60.8 153 39.2
Lj3g0018686 Lotus japonicus HOM05D003527 ORTHO05D004099 2.1e-07 60.5 107 42.1
FAN09G0639 Fragaria x ananassa HOM05D003527 ORTHO05D004099 2.7e-07 60.1 153 39.9
Nn5g26928 Nelumbo nucifera HOM05D003527 ORTHO05D004099 2.7e-07 60.1 132 39.4
GSVIVG01034186001 Vitis vinifera HOM05D003527 ORTHO05D004099 4.6e-07 59.3 123 40.7
CsaV3_6G016930 Cucumis sativus L. HOM05D003527 ORTHO05D004099 6.0e-07 58.9 123 40.7
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 6.0e-07 58.9 105 41.0
Eucgr.J02057 Eucalyptus grandis HOM05D003527 ORTHO05D004099 7.9e-07 58.5 121 39.7
MSTRG.19089 Avicennia marina HOM05D003527 ORTHO05D004099 1.3e-06 57.8 121 37.2
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 1.3e-06 57.8 108 39.8
arahy.Tifrunner.gnm1.ann1.0C4VVF Arachis hypogaea HOM05D003527 ORTHO05D004099 2.3e-06 57.0 137 33.6
Manes.08G081800 Manihot esculenta HOM05D003527 ORTHO05D004099 2.3e-06 57.0 112 37.5
MSTRG.5670 Avicennia marina HOM05D003527 ORTHO05D004099 3.9e-06 56.2 133 37.6
Manes.11G131300 Manihot esculenta HOM05D003527 ORTHO05D004099 3.9e-06 56.2 126 36.5
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.9e-06 56.2 137 36.5
Aqoxy4G02910 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 5.1e-06 55.8 130 38.5
Nn2g10383 Nelumbo nucifera HOM05D003527 ORTHO05D004099 5.1e-06 55.8 139 37.4
Peaxi162Scf00165g01520 Petunia axillaris HOM05D003527 ORTHO05D004099 5.1e-06 55.8 129 32.6


User provided reference genes

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