Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03009 Vaccinium macrocarpon HOM05D005372 ORTHO05D006593 3.4e-51 204.9 119 100.0
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 7.1e-33 144.1 151 54.3
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 9.6e-30 133.7 153 58.8
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 3.7e-29 131.7 153 57.5
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 1.4e-25 119.8 147 49.0
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 7.9e-24 114.0 151 57.0
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 1.3e-23 113.2 151 58.3
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 4.8e-21 104.8 155 47.1
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 4.8e-21 104.8 155 47.1
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 4.8e-21 104.8 155 47.1
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 2.0e-19 99.4 61 77.0
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 7.7e-19 97.4 153 43.1
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 7.7e-19 97.4 159 40.9
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 3.8e-18 95.1 140 42.9
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 5.0e-18 94.7 163 41.1
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 1.4e-17 93.2 159 39.6
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 1.4e-17 93.2 159 39.6
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 2.5e-17 92.4 65 67.7
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 3.2e-17 92.0 154 40.3
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 5.5e-17 91.3 156 42.3
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 5.5e-17 91.3 61 68.9
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 7.2e-17 90.9 151 40.4
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 9.4e-17 90.5 65 66.2
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 1.2e-16 90.1 162 48.1
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 1.6e-16 89.7 163 41.1
COL.COLO4_19070 Corchorus olitorius HOM05D005372 ORTHO05D006593 2.1e-16 89.4 131 54.2
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 2.1e-16 89.4 156 39.1
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 2.7e-16 89.0 56 71.4
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 4.6e-16 88.2 60 66.7
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 6.1e-16 87.8 154 41.6
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 1.8e-15 86.3 163 46.0
Oeu002454.1 Olea europaea HOM05D005372 ORTHO05D006593 2.3e-15 85.9 61 65.6
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 3.0e-15 85.5 60 65.0
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 3.9e-15 85.1 60 66.7
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 3.9e-15 85.1 60 66.7
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 5.1e-15 84.7 71 60.6
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 5.1e-15 84.7 71 57.7
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 6.7e-15 84.3 51 72.5
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 6.7e-15 84.3 51 72.5
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 6.7e-15 84.3 71 60.6
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 6.7e-15 84.3 58 70.7
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 1.1e-14 83.6 153 39.2
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 1.1e-14 83.6 71 59.2
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 1.1e-14 83.6 70 58.6
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 1.1e-14 83.6 56 66.1
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 1.1e-14 83.6 71 60.6
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 1.5e-14 83.2 159 41.5
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 2.0e-14 82.8 141 41.1
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 2.5e-14 82.4 71 59.2
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 2.5e-14 82.4 61 67.2
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 2.5e-14 82.4 144 38.9
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 2.5e-14 82.4 52 67.3
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 4.3e-14 81.6 150 37.3
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 4.3e-14 81.6 53 67.9
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 4.3e-14 81.6 71 59.2
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 5.7e-14 81.3 151 37.1
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 5.7e-14 81.3 53 67.9
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 5.7e-14 81.3 72 58.3
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 5.7e-14 81.3 63 65.1
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 7.4e-14 80.9 67 59.7
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 7.4e-14 80.9 72 55.6
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 7.4e-14 80.9 72 55.6
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 7.4e-14 80.9 52 69.2
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 7.4e-14 80.9 53 67.9
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 9.7e-14 80.5 61 63.9
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 9.7e-14 80.5 53 64.2
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 9.7e-14 80.5 150 36.7
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 1.3e-13 80.1 156 39.1
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 1.3e-13 80.1 71 57.7
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 1.3e-13 80.1 64 62.5
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 1.7e-13 79.7 152 37.5
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 1.7e-13 79.7 157 38.2
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 1.7e-13 79.7 63 61.9
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.7e-13 79.7 72 55.6
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 1.7e-13 79.7 71 56.3
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 2.2e-13 79.3 139 41.0
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 2.2e-13 79.3 51 66.7
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 2.2e-13 79.3 156 40.4
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 2.8e-13 79.0 150 37.3
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 2.8e-13 79.0 47 72.3
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 2.8e-13 79.0 52 69.2
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 2.8e-13 79.0 52 69.2
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 2.8e-13 79.0 53 66.0
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 3.7e-13 78.6 156 39.1
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 3.7e-13 78.6 156 39.1
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 3.7e-13 78.6 149 36.9
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 3.7e-13 78.6 53 66.0
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 3.7e-13 78.6 49 71.4
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 4.8e-13 78.2 52 67.3
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 6.3e-13 77.8 150 38.7
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 6.3e-13 77.8 50 66.0
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 6.3e-13 77.8 63 61.9
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 8.2e-13 77.4 157 37.6
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 1.1e-12 77.0 139 35.3
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 1.4e-12 76.6 154 42.2
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 1.4e-12 76.6 70 54.3
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 1.4e-12 76.6 53 62.3
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 3.1e-12 75.5 51 64.7
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 3.1e-12 75.5 52 65.4
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 4.1e-12 75.1 147 38.1
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 5.3e-12 74.7 51 64.7
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 5.3e-12 74.7 70 57.1
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 6.9e-12 74.3 53 64.2
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 9.1e-12 73.9 139 34.5
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 9.1e-12 73.9 55 58.2
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 4.5e-11 71.6 48 68.8
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 5.9e-11 71.2 131 35.9
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 5.9e-11 71.2 55 60.0
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 7.7e-11 70.9 61 54.1
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 7.7e-11 70.9 135 37.8
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 7.7e-11 70.9 165 40.6
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 1.0e-10 70.5 63 54.0
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 1.0e-10 70.5 61 54.1
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 1.7e-10 69.7 62 53.2
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 2.5e-09 65.9 56 57.1
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 3.2e-09 65.5 98 40.8
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 3.6e-08 62.0 60 50.0
Dinv20930 Davidia involucrata HOM05D005372 ORTHO05D006593 6.1e-08 61.2 46 63.0
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 3.0e-07 58.9 64 45.3
Dinv21014 Davidia involucrata HOM05D005372 ORTHO05D006593 3.9e-07 58.5 44 63.6
BraA10t43707Z Brassica rapa HOM05D005372 ORTHO05D006593 3.3e-06 55.5 53 58.5
BolC2t07410H Brassica oleracea HOM05D005372 ORTHO05D006593 9.7e-06 53.9 168 31.0
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 9.7e-06 53.9 44 54.5


User provided reference genes

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