Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 1.3e-60 236.1 114 100.0
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 9.5e-43 176.8 106 79.2
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 3.2e-38 161.8 115 72.2
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 2.5e-35 152.1 116 65.5
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 4.3e-35 151.4 114 64.0
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 7.3e-35 150.6 109 67.0
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.2e-34 149.8 111 64.0
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 4.7e-34 147.9 111 62.2
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 6.2e-34 147.5 115 62.6
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.2e-34 147.5 107 65.4
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 8.1e-34 147.1 108 66.7
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 8.1e-34 147.1 115 62.6
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.8e-33 146.0 105 65.7
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 4.0e-33 144.8 108 65.7
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 5.2e-33 144.4 108 63.9
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 1.2e-32 143.3 114 61.4
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.5e-32 142.9 109 61.5
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.6e-32 142.1 107 64.5
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 3.4e-32 141.7 111 61.3
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 7.6e-32 140.6 114 60.5
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 9.9e-32 140.2 103 66.0
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.9e-31 138.7 113 61.9
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 6.4e-31 137.5 107 57.9
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 6.4e-31 137.5 111 58.6
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 1.4e-30 136.3 113 60.2
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.4e-30 135.6 115 59.1
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 2.4e-30 135.6 114 59.6
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 3.2e-30 135.2 122 61.5
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 4.1e-30 134.8 114 57.9
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 9.2e-30 133.7 113 60.2
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 2.1e-29 132.5 115 58.3
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.5e-29 131.7 104 62.5
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 3.5e-29 131.7 104 63.5
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 6.0e-29 131.0 108 60.2
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.3e-28 129.8 111 63.1
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 1.3e-28 129.8 104 61.5
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.3e-28 129.8 104 61.5
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.3e-28 129.8 104 61.5
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 1.3e-28 129.8 114 57.0
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 1.3e-28 129.8 109 59.6
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.7e-28 129.4 104 62.5
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 2.3e-28 129.0 112 58.0
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.3e-28 129.0 114 57.0
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 2.3e-28 129.0 114 57.0
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 3.0e-28 128.6 115 57.4
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.9e-28 128.3 104 60.6
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 3.9e-28 128.3 112 58.0
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 3.9e-28 128.3 107 57.0
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 3.9e-28 128.3 110 60.0
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 6.6e-28 127.5 89 68.5
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 6.6e-28 127.5 103 62.1
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 8.6e-28 127.1 103 58.3
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 8.6e-28 127.1 105 57.1
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 1.9e-27 125.9 111 57.7
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 3.3e-27 125.2 109 57.8
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 5.6e-27 124.4 111 58.6
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.2e-26 123.2 102 58.8
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 3.6e-26 121.7 90 65.6
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 3.6e-26 121.7 117 53.0
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 4.7e-26 121.3 109 57.8
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 6.2e-26 120.9 104 57.7
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 6.2e-26 120.9 109 58.7
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 6.2e-26 120.9 90 62.2
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.1e-25 120.2 104 56.7
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 1.8e-25 119.4 92 64.1
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 1.8e-25 119.4 113 55.8
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 3.1e-25 118.6 109 58.7
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 3.1e-25 118.6 112 55.4
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.9e-25 117.5 104 60.6
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.9e-25 117.5 104 60.6
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 8.9e-25 117.1 115 54.8
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 8.9e-25 117.1 113 58.4
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.2e-24 116.7 116 54.3
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 4.4e-24 114.8 104 61.5
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 4.4e-24 114.8 112 53.6
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 7.6e-24 114.0 116 53.4
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 7.6e-24 114.0 116 53.4
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 7.6e-24 114.0 108 52.8
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 2.2e-23 112.5 106 56.6
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 4.9e-23 111.3 93 60.2
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 6.4e-23 110.9 108 53.7
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 6.4e-23 110.9 98 57.1
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.4e-22 109.8 113 53.1
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 2.4e-22 109.0 109 56.0
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 2.4e-22 109.0 85 63.5
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 3.2e-22 108.6 98 56.1
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 9.3e-22 107.1 101 52.5
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 1.2e-21 106.7 99 56.6
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 3.5e-21 105.1 105 52.4
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 1.0e-20 103.6 113 50.4
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.3e-20 103.2 92 57.6
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.3e-20 103.2 85 60.0
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 2.3e-20 102.4 87 60.9
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.3e-20 102.4 86 60.5
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 5.1e-20 101.3 85 58.8
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 5.1e-20 101.3 87 59.8
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 6.6e-20 100.9 90 57.8
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 6.6e-20 100.9 87 59.8
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 8.7e-20 100.5 87 58.6
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.1e-19 100.1 86 59.3
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.9e-19 99.4 64 67.2
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 4.3e-19 98.2 85 56.5
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 7.3e-19 97.4 86 57.0
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.6e-18 96.3 82 54.9
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 2.1e-18 95.9 86 55.8
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 1.4e-17 93.2 101 46.5
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.8e-17 92.8 63 66.7
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 2.4e-17 92.4 85 51.8
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 3.1e-17 92.0 95 48.4
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.1e-17 92.0 86 57.0
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 4.0e-17 91.7 85 54.1
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.9e-17 90.9 92 47.8
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.5e-16 89.7 85 52.9
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 2.0e-16 89.4 89 48.3
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 2.0e-16 89.4 69 58.0
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 3.4e-16 88.6 85 52.9
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 3.4e-16 88.6 85 52.9
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 3.4e-16 88.6 85 52.9
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 7.6e-16 87.4 69 60.9
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 9.9e-16 87.0 94 43.6
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 1.3e-15 86.7 104 41.3
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.7e-15 86.3 56 67.9
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 2.2e-15 85.9 94 45.7
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.2e-14 82.0 84 47.6
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 2.7e-13 79.0 65 52.3
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 6.7e-12 74.3 59 55.9
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 6.7e-12 74.3 59 55.9
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.1e-11 73.6 64 54.7
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.1e-11 73.6 64 54.7
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.1e-11 73.6 64 54.7
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.1e-11 73.6 64 54.7
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 4.9e-07 58.2 75 33.3


User provided reference genes

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