Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.9e-107 392.5 201 100.0
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.6e-64 250.0 202 69.8
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 2.3e-63 246.1 175 76.6
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.0e-60 235.7 209 65.1
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 6.8e-60 234.6 202 64.9
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.7e-59 231.5 209 65.1
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.7e-58 229.9 197 67.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 2.8e-58 229.2 173 70.5
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 5.4e-57 224.9 198 62.6
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 2.0e-56 223.0 201 63.2
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 3.5e-56 222.2 203 62.6
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.5e-56 221.9 200 66.5
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.5e-54 216.9 215 60.5
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.5e-54 216.9 215 60.5
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 1.6e-53 213.4 197 62.9
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 6.1e-53 211.5 162 68.5
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 8.0e-53 211.1 204 61.3
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.0e-52 210.7 201 61.7
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.0e-52 210.7 228 57.9
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 3.1e-52 209.1 188 64.9
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 5.2e-52 208.4 176 63.1
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 6.8e-52 208.0 222 55.0
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 8.9e-52 207.6 188 60.6
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.2e-51 207.2 176 62.5
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 4.4e-51 205.3 199 58.8
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 3.7e-50 202.2 174 63.2
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 4.9e-50 201.8 209 56.0
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 4.9e-50 201.8 170 63.5
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.1e-49 200.7 174 62.6
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.4e-49 200.3 172 64.5
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 1.9e-49 199.9 205 57.6
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 2.4e-49 199.5 174 63.2
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.2e-48 197.2 201 57.2
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.7e-48 196.1 169 63.9
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.7e-48 196.1 226 54.9
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 3.5e-48 195.7 217 56.2
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 4.6e-48 195.3 172 63.4
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 4.6e-48 195.3 201 57.2
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 4.6e-48 195.3 163 65.0
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 6.0e-48 194.9 209 57.9
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 6.0e-48 194.9 225 53.3
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.0e-48 194.9 179 59.8
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 6.0e-48 194.9 220 55.5
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.7e-47 193.4 204 57.8
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 2.3e-47 193.0 164 64.0
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 2.3e-47 193.0 158 65.8
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.9e-47 192.2 170 63.5
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.0e-47 191.8 202 53.5
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 5.0e-47 191.8 163 65.0
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 1.1e-46 190.7 204 56.9
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.1e-46 190.7 172 62.2
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.5e-46 190.3 158 64.6
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.5e-46 190.3 212 56.6
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.9e-46 189.9 208 54.3
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 1.9e-46 189.9 173 61.8
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 9.5e-46 187.6 162 62.3
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 9.5e-46 187.6 204 57.4
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.2e-45 187.2 205 52.7
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 6.2e-45 184.9 155 63.9
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.1e-44 184.1 202 55.4
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 2.3e-44 183.0 206 52.4
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 5.2e-44 181.8 156 62.8
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 5.2e-44 181.8 156 62.8
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 5.2e-44 181.8 227 52.0
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 6.8e-44 181.4 197 54.3
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 6.8e-44 181.4 163 60.1
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 8.9e-44 181.0 159 61.6
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 1.2e-43 180.6 208 53.4
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.5e-43 180.3 196 54.1
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.5e-43 180.3 196 54.1
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 2.6e-43 179.5 201 53.2
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 5.8e-43 178.3 196 53.6
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 7.5e-43 177.9 202 52.5
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 9.8e-43 177.6 172 58.7
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.3e-42 177.2 176 55.1
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.3e-42 177.2 150 64.0
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.7e-42 176.8 212 53.3
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.2e-42 176.4 197 52.8
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.2e-42 176.4 187 53.5
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 2.2e-42 176.4 160 59.4
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.7e-42 175.6 176 54.5
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 3.7e-42 175.6 162 58.0
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 6.4e-42 174.9 200 51.0
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 8.3e-42 174.5 160 60.0
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.4e-41 173.7 208 49.5
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.9e-41 173.3 162 57.4
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 7.0e-41 171.4 202 51.5
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 7.0e-41 171.4 108 77.8
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 7.0e-41 171.4 202 53.0
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 2.1e-40 169.9 158 56.3
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.7e-40 169.5 199 51.3
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 3.5e-40 169.1 198 50.0
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.6e-40 168.7 191 53.4
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.0e-39 167.5 159 57.9
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 3.0e-39 166.0 153 57.5
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 8.6e-39 164.5 170 54.1
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.1e-38 164.1 112 69.6
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 4.3e-38 162.2 118 65.3
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 4.3e-38 162.2 156 53.8
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 2.1e-37 159.8 106 68.9
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 3.1e-36 156.0 106 71.7
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.2e-35 154.1 226 45.1
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.4e-35 152.1 182 50.0
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 8.3e-34 147.9 215 48.4
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.6e-32 143.7 137 60.6
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 2.1e-29 133.3 147 53.1
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.8e-28 130.2 88 70.5
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 1.7e-26 123.6 112 51.8
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 9.2e-25 117.9 101 52.5
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 3.9e-23 112.5 110 50.9
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 5.6e-22 108.6 178 39.9
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 4.0e-20 102.4 109 53.2
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.3e-15 86.7 144 47.2
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 1.1e-14 84.3 72 55.6
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 9.6e-14 81.3 144 39.6
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 1.3e-10 70.9 146 39.7


User provided reference genes

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