Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 2.1e-79 298.9 143 100.0
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 6.8e-30 134.4 60 95.0
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.1e-27 127.1 66 80.3
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 4.1e-27 125.2 73 74.0
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 5.4e-27 124.8 60 86.7
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 7.0e-27 124.4 73 74.0
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 1.2e-26 123.6 57 89.5
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 2.0e-26 122.9 69 79.7
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 2.0e-26 122.9 57 91.2
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.6e-26 121.7 60 83.3
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.6e-26 121.7 66 83.3
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 6.0e-26 121.3 73 76.7
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.0e-25 120.6 98 61.2
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 1.0e-25 120.6 60 86.7
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.3e-25 120.2 57 87.7
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.7e-25 119.8 76 72.4
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 2.3e-25 119.4 53 94.3
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.3e-25 119.4 58 84.5
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 3.0e-25 119.0 60 81.7
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 3.0e-25 119.0 60 80.0
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 3.0e-25 119.0 75 72.0
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 3.9e-25 118.6 60 86.7
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 6.6e-25 117.9 64 81.2
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 8.6e-25 117.5 51 96.1
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 8.6e-25 117.5 57 87.7
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.6e-25 117.5 51 96.1
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 8.6e-25 117.5 51 96.1
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.1e-24 117.1 60 83.3
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.1e-24 117.1 60 83.3
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.1e-24 117.1 60 83.3
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.1e-24 117.1 60 83.3
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.1e-24 117.1 56 89.3
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 1.1e-24 117.1 58 86.2
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.5e-24 116.7 50 98.0
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.5e-24 116.7 66 77.3
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.5e-24 116.7 61 82.0
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 1.5e-24 116.7 59 81.4
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.5e-24 116.7 73 71.2
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.9e-24 116.3 57 82.5
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.9e-24 116.3 75 72.0
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 3.3e-24 115.5 60 85.0
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.3e-24 115.5 51 94.1
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.3e-24 115.5 51 94.1
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.3e-24 115.5 51 94.1
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 3.3e-24 115.5 53 90.6
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.3e-24 115.5 85 65.9
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.3e-24 115.5 51 96.1
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 4.3e-24 115.2 57 86.0
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 4.3e-24 115.2 53 88.7
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 4.3e-24 115.2 51 94.1
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 4.3e-24 115.2 74 67.6
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 4.3e-24 115.2 80 68.8
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 5.6e-24 114.8 57 84.2
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 5.6e-24 114.8 61 77.0
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 7.3e-24 114.4 87 59.8
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 9.5e-24 114.0 77 71.4
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 9.5e-24 114.0 77 71.4
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 9.5e-24 114.0 77 71.4
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 9.5e-24 114.0 51 92.2
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 1.2e-23 113.6 50 96.0
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 1.2e-23 113.6 50 96.0
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 1.2e-23 113.6 50 96.0
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 1.2e-23 113.6 50 96.0
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 1.2e-23 113.6 50 96.0
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 1.2e-23 113.6 70 77.1
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.2e-23 113.6 57 77.2
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 1.2e-23 113.6 61 77.0
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.2e-23 113.6 50 96.0
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.2e-23 113.6 75 70.7
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 1.6e-23 113.2 60 83.3
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 1.6e-23 113.2 50 94.0
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 1.6e-23 113.2 53 90.6
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.1e-23 112.8 77 71.4
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 2.1e-23 112.8 63 81.0
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 2.1e-23 112.8 51 94.1
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.1e-23 112.8 52 88.5
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 2.8e-23 112.5 51 92.2
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 2.8e-23 112.5 74 70.3
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 2.8e-23 112.5 78 65.4
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 3.6e-23 112.1 49 95.9
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 3.6e-23 112.1 49 95.9
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 3.6e-23 112.1 52 90.4
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 3.6e-23 112.1 50 92.0
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 4.7e-23 111.7 57 84.2
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 6.2e-23 111.3 84 64.3
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 8.0e-23 110.9 64 73.4
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 8.0e-23 110.9 76 68.4
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.4e-22 110.2 54 81.5
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.4e-22 110.2 52 84.6
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 3.1e-22 109.0 51 84.3
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 5.2e-22 108.2 49 87.8
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 5.2e-22 108.2 49 87.8
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 5.2e-22 108.2 49 87.8
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 6.8e-22 107.8 60 71.7
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 6.8e-22 107.8 53 83.0
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 2.6e-21 105.9 50 88.0
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 3.4e-21 105.5 49 85.7
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 4.4e-21 105.1 71 70.4
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 5.8e-21 104.8 49 87.8
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 7.5e-21 104.4 51 82.4
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 7.5e-21 104.4 51 84.3
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 9.8e-21 104.0 70 65.7
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.3e-20 103.6 49 85.7
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 2.9e-20 102.4 46 84.8
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 8.3e-20 100.9 50 78.0
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 1.9e-19 99.8 52 76.9
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 4.1e-19 98.6 50 76.0
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 1.2e-18 97.1 52 75.0
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.6e-18 96.7 76 57.9
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 2.7e-18 95.9 49 79.6
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.0e-17 94.0 60 73.3
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 2.3e-17 92.8 46 80.4
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 5.0e-17 91.7 82 50.0
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 5.6e-16 88.2 72 59.7
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 1.2e-15 87.0 49 67.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 2.1e-15 86.3 56 60.7


User provided reference genes

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