Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 9.3e-186 653.7 399 100.0
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.4e-120 437.2 398 66.1
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 3.3e-90 336.3 447 50.6
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 2.4e-80 303.5 435 50.1
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 3.9e-75 286.2 416 51.7
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 3.3e-74 283.1 412 47.1
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 2.5e-66 256.9 413 46.0
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 6.2e-65 252.3 413 46.2
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 4.2e-61 239.6 416 44.0
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 1.1e-58 231.5 449 42.8
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 3.3e-58 229.9 418 43.5
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 3.7e-57 226.5 439 42.1
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 6.3e-57 225.7 453 40.4
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 6.9e-56 222.2 408 44.6
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 2.6e-55 220.3 424 40.8
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 8.4e-54 215.3 468 38.2
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 2.7e-52 210.3 422 37.2
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.5e-50 204.5 344 45.9
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 9.7e-50 201.8 453 37.3
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.1e-48 198.4 459 35.3
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.4e-48 198.0 462 36.8
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 1.8e-48 197.6 433 41.8
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 2.4e-48 197.2 419 39.1
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 1.5e-47 194.5 444 34.9
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 2.0e-47 194.1 409 40.8
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.9e-47 192.6 421 41.6
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.7e-46 191.0 395 37.5
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 8.5e-46 188.7 436 39.2
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.2e-44 184.9 439 39.9
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 1.4e-43 181.4 504 34.9
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 1.5e-42 177.9 413 39.7
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 9.7e-42 175.3 438 34.7
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.3e-41 174.9 440 35.0
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 6.3e-41 172.6 439 37.6
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 8.2e-41 172.2 412 40.3
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 1.4e-40 171.4 464 34.7
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.8e-40 171.0 465 40.4
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 6.9e-40 169.1 471 38.4
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.5e-39 167.9 427 36.5
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 2.0e-39 167.5 426 39.2
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 5.9e-39 166.0 432 42.6
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 5.9e-39 166.0 422 35.1
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.3e-38 164.9 433 33.5
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.3e-38 164.9 479 35.7
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.3e-38 164.9 388 35.8
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 1.7e-38 164.5 471 33.5
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 2.9e-38 163.7 428 34.3
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 5.0e-38 162.9 428 34.6
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 1.1e-37 161.8 410 39.0
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 3.2e-37 160.2 437 40.0
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 5.5e-37 159.5 412 37.6
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 1.6e-36 157.9 419 37.0
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 4.7e-36 156.4 428 33.6
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 4.7e-36 156.4 428 33.6
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 4.7e-36 156.4 409 38.1
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 4.7e-36 156.4 407 38.3
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 1.4e-35 154.8 395 34.4
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 1.4e-35 154.8 404 39.6
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 1.8e-35 154.5 409 36.4
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.3e-35 154.1 411 35.5
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 3.0e-35 153.7 428 33.4
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 6.7e-35 152.5 396 35.6
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.1e-32 145.2 400 35.2
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.1e-32 145.2 415 38.3
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.1e-32 145.2 415 38.3
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 1.4e-32 144.8 451 35.5
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 4.1e-32 143.3 311 40.5
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 9.1e-32 142.1 127 60.6
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.0e-31 141.0 140 67.1
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 2.0e-31 141.0 293 36.2
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 7.7e-31 139.0 383 35.5
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 1.0e-30 138.7 401 35.9
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.3e-30 138.3 379 40.1
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 1.7e-30 137.9 421 35.2
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.7e-30 137.9 418 34.4
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 2.2e-30 137.5 149 57.7
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 2.2e-30 137.5 143 63.6
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.2e-30 137.5 424 32.8
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 2.9e-30 137.1 437 31.4
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 2.9e-30 137.1 437 31.4
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 5.0e-30 136.3 415 34.9
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 8.5e-30 135.6 459 34.6
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 1.5e-29 134.8 386 32.1
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 2.5e-29 134.0 417 31.9
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 7.2e-29 132.5 589 32.6
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 2.1e-28 131.0 434 36.2
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.1e-28 131.0 411 34.1
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.7e-28 130.6 396 32.8
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 4.7e-28 129.8 421 37.5
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 4.7e-28 129.8 415 35.9
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 8.0e-28 129.0 139 53.2
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 8.0e-28 129.0 577 33.1
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 1.0e-27 128.6 429 32.9
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 1.4e-27 128.3 498 34.9
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 1.4e-27 128.3 156 55.8
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 1.8e-27 127.9 421 37.1
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 1.8e-27 127.9 158 46.2
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 2.3e-27 127.5 577 32.9
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 2.3e-27 127.5 567 31.9
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 4.0e-27 126.7 575 33.0
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 5.2e-27 126.3 385 33.8
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 4.4e-26 123.2 512 31.2
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 7.5e-26 122.5 389 30.6
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.2e-25 120.9 407 32.7
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 3.7e-25 120.2 381 32.0
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.4e-24 118.2 120 69.2
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 1.2e-23 115.2 381 36.5
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 1.2e-23 115.2 367 29.2
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 1.1e-21 108.6 517 33.5
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 1.6e-20 104.8 382 29.6
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.1e-20 104.4 121 45.5
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 3.6e-20 103.6 449 33.6
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 8.0e-20 102.4 321 34.9
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.8e-19 101.3 129 46.5
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.5e-18 98.2 117 48.7
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 4.4e-18 96.7 129 42.6
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 5.7e-18 96.3 129 48.1
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 7.5e-18 95.9 309 32.4
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 7.5e-18 95.9 124 43.5
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 4.8e-17 93.2 131 43.5
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 1.1e-16 92.0 390 30.5
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 5.9e-15 86.3 415 28.0
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.0e-14 85.5 361 31.6
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 2.2e-14 84.3 107 44.9
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 1.9e-13 81.3 156 51.9
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 3.2e-13 80.5 381 29.4
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 2.1e-12 77.8 380 30.5
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 6.8e-11 72.8 152 50.0
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 6.8e-11 72.8 47 68.1
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 2.0e-10 71.2 239 28.5
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 3.5e-07 60.5 138 41.3
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 1.0e-06 58.9 391 27.6


User provided reference genes

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