Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 1.1e-127 459.9 227 100.0
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 2.8e-62 242.7 172 76.7
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 1.5e-42 177.2 181 62.4
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.1e-41 173.3 178 60.7
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 3.7e-38 162.5 177 57.6
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 2.2e-35 153.3 179 57.5
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 5.0e-35 152.1 185 53.5
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 6.5e-35 151.8 177 58.2
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 8.5e-35 151.4 183 53.6
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 1.6e-33 147.1 181 52.5
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 2.7e-33 146.4 180 53.3
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 6.1e-33 145.2 183 53.0
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 6.1e-33 145.2 183 53.0
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 6.1e-33 145.2 177 53.1
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 1.4e-32 144.1 182 52.2
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 1.4e-32 144.1 182 52.2
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 5.2e-32 142.1 183 52.5
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 6.8e-32 141.7 164 54.9
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 2.0e-31 140.2 188 50.0
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 2.0e-31 140.2 177 52.5
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 2.0e-31 140.2 181 52.5
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 8.3e-30 134.8 163 54.0
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.4e-29 134.0 196 49.0
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 1.8e-29 133.7 183 49.2
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 1.8e-29 133.7 182 50.5
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 2.4e-29 133.3 181 47.0
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 5.4e-29 132.1 187 49.2
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 7.0e-29 131.7 162 50.0
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 9.1e-29 131.3 183 47.0
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 1.6e-28 130.6 176 48.9
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 1.6e-28 130.6 184 49.5
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 2.7e-28 129.8 163 52.8
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 3.5e-28 129.4 173 49.1
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 3.5e-28 129.4 162 51.9
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 4.5e-28 129.0 180 49.4
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 5.9e-28 128.6 182 48.4
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 7.7e-28 128.3 172 50.6
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 7.7e-28 128.3 235 43.0
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 1.3e-27 127.5 155 51.6
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 1.3e-27 127.5 155 51.6
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 1.3e-27 127.5 171 51.5
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 2.2e-27 126.7 194 46.9
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 3.8e-27 125.9 163 52.8
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 3.8e-27 125.9 149 52.3
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 8.5e-27 124.8 162 51.2
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 2.5e-26 123.2 177 47.5
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 2.5e-26 123.2 169 47.3
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 3.2e-26 122.9 180 48.9
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 4.2e-26 122.5 183 48.1
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 9.4e-26 121.3 181 45.9
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.1e-25 120.2 180 49.4
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 2.7e-25 119.8 172 46.5
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.6e-25 119.4 179 47.5
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.6e-25 119.4 179 47.5
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 3.6e-25 119.4 179 47.5
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 1.0e-24 117.9 172 44.2
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 1.8e-24 117.1 180 45.0
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.8e-24 117.1 193 41.5
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 4.0e-24 115.9 181 44.2
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 5.7e-23 112.1 115 58.3
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 1.7e-22 110.5 189 41.8
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 8.3e-22 108.2 185 42.7
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 1.4e-21 107.5 183 41.5
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 2.4e-21 106.7 116 52.6
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 2.0e-20 103.6 163 44.8
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 2.7e-20 103.2 181 43.1
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 2.3e-19 100.1 170 41.2
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 1.1e-18 97.8 179 40.2
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 3.3e-18 96.3 190 38.9
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 5.2e-16 89.0 191 36.6
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 1.2e-15 87.8 179 39.1
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 5.7e-15 85.5 179 38.5
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 2.2e-14 83.6 131 44.3
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 3.7e-14 82.8 178 39.9
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 4.9e-14 82.4 173 37.6
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 4.9e-14 82.4 163 40.5
Lj3g0009150 Lotus japonicus HOM05D000347 ORTHO05D008062 2.0e-12 77.0 172 38.4
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 4.6e-12 75.9 181 36.5
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 4.6e-12 75.9 118 50.0
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 1.7e-11 73.9 68 61.8
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 3.9e-11 72.8 186 36.0
Glyma.16G094000 Glycine max HOM05D000347 ORTHO05D008062 3.9e-11 72.8 168 33.3
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 1.1e-10 71.2 187 35.3
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 2.5e-10 70.1 178 37.1
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 3.3e-10 69.7 165 35.8
A07p07520 Brassica napus HOM05D011699 ORTHO05D008062 3.3e-10 69.7 185 33.0
BraA07t28543Z Brassica rapa HOM05D011699 ORTHO05D008062 3.3e-10 69.7 185 33.0
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 4.3e-10 69.3 178 35.4
ECA248G1409 Erigeron canadensis HOM05D000102 ORTHO05D000138 2.8e-09 66.6 74 50.0
C07p11290 Brassica napus HOM05D011699 ORTHO05D008062 1.0e-08 64.7 185 31.9
Peaxi162Scf02141g00004 Petunia axillaris HOM05D000347 ORTHO05D008062 1.0e-08 64.7 86 48.8
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.4e-08 64.3 167 35.3
AL3G40480 Arabidopsis lyrata HOM05D011699 ORTHO05D008062 2.3e-08 63.5 143 35.7
Sp3g22490 Schrenkiella parvula HOM05D011699 ORTHO05D008062 2.3e-08 63.5 144 33.3
Phvul.010G019300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 3.1e-08 63.2 180 31.7
VMungo0331G1006 Vigna mungo HOM05D000347 ORTHO05D008062 4.0e-08 62.8 157 30.6
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 8.9e-08 61.6 147 41.5
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 8.9e-08 61.6 173 32.9
AT3G24750 Arabidopsis thaliana HOM05D011699 ORTHO05D008062 5.8e-07 58.9 148 32.4
Carub.0003s2514 Capsella rubella HOM05D011699 ORTHO05D008062 5.8e-07 58.9 143 35.0
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 5.8e-07 58.9 157 35.7
Thhalv10002691m.g Eutrema salsugineum HOM05D011699 ORTHO05D008062 9.8e-07 58.2 148 35.1
BcaC06g35749 Brassica carinata HOM05D011699 ORTHO05D008062 2.2e-06 57.0 179 31.8
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 2.2e-06 57.0 179 31.8
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 4.9e-06 55.8 99 42.4
Phvul.010G019000 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 4.9e-06 55.8 180 30.6
BcaB06g26692 Brassica carinata HOM05D011699 ORTHO05D008062 6.4e-06 55.5 169 30.2


User provided reference genes

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