Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 9.3e-131 470.3 255 100.0
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 3.6e-58 229.2 205 66.8
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 2.3e-49 199.9 206 62.1
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 1.6e-45 187.2 204 59.8
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.2e-40 171.0 211 53.1
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 3.4e-40 169.5 214 50.5
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 1.3e-39 167.5 205 53.2
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 6.4e-39 165.2 207 52.7
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 1.9e-38 163.7 211 51.7
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 5.4e-38 162.2 209 53.6
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 1.2e-37 161.0 223 48.0
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 1.3e-36 157.5 210 50.5
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 1.3e-36 157.5 207 49.3
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 1.3e-36 157.5 207 51.7
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 5.1e-36 155.6 210 47.6
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 6.6e-36 155.2 190 50.5
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 6.6e-36 155.2 208 51.0
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 8.7e-36 154.8 198 51.5
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 1.1e-35 154.5 212 52.4
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 1.5e-35 154.1 210 47.1
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 4.3e-35 152.5 195 47.7
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 4.3e-35 152.5 210 48.6
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 7.3e-35 151.8 212 50.0
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 6.2e-34 148.7 183 49.7
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 6.2e-34 148.7 208 50.0
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 6.2e-34 148.7 177 53.7
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 8.1e-34 148.3 205 49.8
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.8e-33 147.1 208 49.5
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 3.1e-33 146.4 208 48.1
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 5.3e-33 145.6 206 50.5
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 3.4e-32 142.9 205 47.3
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 4.4e-32 142.5 210 48.1
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 5.8e-32 142.1 210 47.6
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 1.3e-31 141.0 197 45.7
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.3e-31 141.0 191 46.6
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 2.9e-31 139.8 208 46.2
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.4e-30 137.5 210 46.7
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 7.1e-30 135.2 210 47.1
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 9.3e-30 134.8 195 46.7
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 1.2e-29 134.4 208 48.6
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 2.7e-29 133.3 105 65.7
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 5.1e-28 129.0 208 43.3
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 5.1e-28 129.0 195 45.1
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 6.6e-28 128.6 213 43.2
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 6.6e-28 128.6 207 47.8
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 8.7e-28 128.3 189 43.9
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 3.3e-27 126.3 195 41.0
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 4.3e-27 125.9 205 42.4
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 4.3e-27 125.9 206 40.8
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 5.6e-27 125.6 144 56.2
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 7.3e-27 125.2 105 76.2
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 7.3e-27 125.2 187 44.4
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 7.3e-27 125.2 104 73.1
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.6e-26 124.0 185 42.2
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 1.6e-26 124.0 105 63.8
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 2.8e-26 123.2 180 42.8
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 3.6e-26 122.9 206 41.7
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 3.6e-26 122.9 206 47.1
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 3.6e-26 122.9 204 42.2
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 1.4e-25 120.9 209 40.7
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 1.8e-25 120.6 105 61.0
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 2.4e-25 120.2 120 64.2
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 4.0e-25 119.4 106 55.7
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 5.3e-25 119.0 209 42.6
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 5.3e-25 119.0 184 42.9
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 5.3e-25 119.0 161 50.9
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 1.5e-24 117.5 211 41.7
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 1.5e-24 117.5 214 39.3
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 3.4e-24 116.3 105 63.8
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 4.5e-24 115.9 108 59.3
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 7.6e-24 115.2 184 41.8
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 9.9e-24 114.8 184 41.3
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 9.9e-24 114.8 104 56.7
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 1.3e-23 114.4 208 40.4
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 1.3e-23 114.4 209 40.7
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 2.2e-23 113.6 105 60.0
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 2.2e-23 113.6 104 66.3
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 2.9e-23 113.2 105 57.1
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 3.8e-23 112.8 210 40.0
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 3.8e-23 112.8 208 39.9
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 3.8e-23 112.8 185 48.1
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.1e-22 111.3 220 36.8
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 1.4e-22 110.9 191 40.8
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 1.4e-22 110.9 191 40.8
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 1.9e-22 110.5 192 41.7
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 4.2e-22 109.4 184 39.7
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 7.9e-21 105.1 160 46.9
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 8.7e-20 101.7 256 37.5
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 4.0e-17 92.8 57 80.7
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 7.6e-16 88.6 56 78.6
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 8.4e-15 85.1 98 52.0
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 3.2e-14 83.2 160 39.4
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 7.9e-13 78.6 156 43.6
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 2.3e-12 77.0 137 43.8
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 8.2e-10 68.6 54 63.0
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 9.3e-06 55.1 56 46.4


User provided reference genes

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